Anopheles coustani: 131261536
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Entry
131261536 CDS
T10908
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
acos Anopheles coustani
Pathway
acos03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acos00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131261536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acos03019
]
131261536
03041 Spliceosome [BR:
acos03041
]
131261536
Messenger RNA biogenesis [BR:
acos03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
131261536
Spliceosome [BR:
acos03041
]
Complex B
Other components
Prp19-related factors
131261536
Complex C
131261536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
TPR_14
HAT_PRP39_C
Suf
TPR_12
TPR_2
TPR_8
TPR_10
Mad3_BUB1_I
ARM_TT21_C
ARM_TT21
PPR
NRDE-2
SNAP
Motif
Other DBs
NCBI-GeneID:
131261536
NCBI-ProteinID:
XP_058119580
LinkDB
All DBs
Position
3:94898861..94901693
Genome browser
AA seq
870 aa
AA seq
DB search
MPIASEVDLAEVFFNEEDLPYEEEILRNAYSVKHWMRYVEHKRNAPRLIINTVFERALKE
LPGSYKLWYNYLKTLRKQVKGKCITDPEYEEANNAFERALVFMHKMPRIWMDYCAFMTSQ
CKITRTRQVFDRALRALPITQHHRIWPLYLEFLKRFDIPETAVRVWRRYLKLCPEDAEEY
VEFLQSIGHLDEAAQQLASIVDNENFVSKHGKSNHQLWNELCELISKNPDKVRSLNVDGI
IRGGLRRYTDQLGHLWNSLAGYYVRSGLFDRARDIYEEAIQTVTTVRDFSQVFDAYAQFE
ELSLSKVMEALERNTNPTEDDEIDVELRMARFECLMERRLLLLNSVLLRQNPHNVAEWHK
RVELYEGKPHEIINTYTEAVHTVQPKLAVGKLYTLWVAFAKFYETNKQLTDARIVFEKAV
QVDYLKVDELASVWCEWAEMEIRQEQYEQALKIMQRATAMPKRKVAYHDDTETVQMRVYK
SLKLWSMYADLEESFGTFKTCKQVYDRIIDLKICTPQIIINYGMFLEEHNYFEEAFKAYE
KGIALFKWPNVYDIWNTYLTKFLHRYGGQKLERARDLFEQCLDGCPPELTKNLYLLYAKL
EEQHGLARHAMAVYERATTAVKEEEMYAMFNLYIKKAAEIYGIPRTRQIYEKAIEVLPEA
DSRKMCVLFAEMETKLGEIDRARAIYAHCSQMCDPRVTAEFWQTWKEFEIRHGNEDTMRE
MLRIKRSIQATYNTQINMMSAALINAAVTAGEPPKDAMRALEVKAAETTARAIAAVGASG
GNIMFVRGETQGGTAKDDRVVNPDEIDIDDDDEEEDEEEEEDGENAQPGEGAGDDEDISK
KVPIERQSIPAKVFGSLRRETEEESNGMNE
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgccgatcgcatcggaagtagatttggcggaagttttcttcaatgaggaggatcttcca
tacgaggaggaaatccttcgcaatgcctactcggttaagcactggatgcgttatgtggaa
cacaaacgtaacgcgccccggttgatcatcaataccgtgttcgagcgggcactgaaggaa
ctgccgggatcgtacaagctgtggtacaactatctgaaaacactgcgcaagcaggtgaag
ggtaaatgcatcaccgacccggagtacgaggaggccaacaatgcgttcgaacgagcactc
gtgttcatgcacaaaatgccccgtatttggatggactattgtgcgttcatgacgtcccag
tgcaagataacacgcacccggcaggtgtttgaccgagccctgagggcgcttccgatcaca
cagcatcaccgcatatggccgctgtacctggagtttctaaaacgcttcgacatcccggag
acggcggtgcgcgtgtggcgtcgctacttaaagctttgccccgaggacgccgaggagtac
gtcgagtttctgcaatcgataggccacctggacgaggccgcacaacagctagcgagcatt
gtggacaacgaaaactttgtctccaagcacggcaaatcgaaccaccagctgtggaacgag
ctgtgcgagctgatttcgaaaaatcccgataaagtgcgttcgctgaatgtggatgggatt
atacgtggcgggttgcgacggtacaccgaccagctggggcacctgtggaactcactggcc
ggatattacgtgcgcagtgggctgttcgatcgggcacgcgatatctacgaggaggccatc
caaacggttaccacggtaagggatttcagtcaggtgtttgatgcgtacgcccagttcgag
gaactgtcgctcagcaaagtgatggaggcgctcgagcgaaacacaaaccccaccgaagac
gatgagatcgacgtggagctgaggatggcccggttcgagtgtctcatggaacgacggttg
ctgctgctgaacagtgtgctgcttcgacagaacccgcacaacgtggccgagtggcacaaa
cgggtcgagctttacgagggaaaaccgcacgaaatcatcaacacgtacacggaggcggtg
cacacggtgcagccgaaactggccgtgggcaaactgtacaccctttgggtggcttttgca
aagttctacgaaaccaacaagcaactcaccgacgcacgcatcgtgtttgaaaaggcagtc
caggtggactacctgaaggtggatgaactggccagcgtttggtgcgagtgggccgagatg
gagatccggcaggagcagtacgagcaagcgttgaagatcatgcagcgtgcgacggcgatg
ccgaaacgaaaggtcgcttaccacgacgacacggagacggtgcagatgcgcgtgtacaag
tcgctcaagctgtggtccatgtacgccgatctggaggagagtttcggcacgttcaagacc
tgcaagcaggtgtacgatcgtatcatcgatttgaagatctgcaccccgcagatcattatc
aactacggcatgttcctggaagagcacaactacttcgaggaggcgttcaaagcgtacgag
aagggaatcgccctgttcaaatggcccaacgtgtacgacatctggaacacatacctcacc
aagttcctgcaccgatacggtgggcaaaagctggagcgggcgcgcgatctgttcgaacag
tgcctggacggatgcccaccggagctgacgaaaaatctctacctactgtacgcgaagctg
gaggagcagcacggactggcgcggcatgcaatggccgtttacgagcgcgccacgacggcg
gtgaaggaggaggaaatgtacgccatgtttaatttgtacatcaaaaaggccgccgaaatc
tacggcatcccacggacgcgccagatctacgagaaagcgatcgaggtcctgccggaagcg
gactcgcgcaaaatgtgcgtcctgtttgccgaaatggaaacgaagctcggtgaaatcgac
cgtgcgcgggcgatctacgcccactgcagccagatgtgcgatccgcgcgtgacggccgaa
ttctggcagacgtggaaagagtttgaaatccgccacggcaacgaggacacgatgcgggag
atgcttcgcatcaagcgctccattcaggcgacgtacaacacgcagatcaacatgatgtcg
gcggcactgatcaatgcggccgtaacggccggtgaaccaccgaaggatgcgatgcgcgcg
ctggaggtgaaagccgcggaaacgaccgcccgggccattgcggctgtcggtgcgagcggt
ggtaacattatgttcgtgcgtggtgaaacgcagggtggcacggcgaaggatgatcgtgtc
gttaatccggacgagatcgacatcgacgatgacgacgaggaggaggatgaggaggaagag
gaggatggcgaaaatgctcaaccaggagagggggcgggtgacgatgaagacatcagcaaa
aaggtcccaatcgaacggcagagcattcccgcgaaggtgtttggaagtttgcgtcgagaa
acggaggaagaatcgaatggcatgaatgagtag
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