Anopheles coustani: 131263446
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Entry
131263446 CDS
T10908
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG5
KO
K11125
protein SMG5
Organism
acos Anopheles coustani
Pathway
acos03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acos00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131263446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acos03019
]
131263446
03032 DNA replication proteins [BR:
acos03032
]
131263446
Messenger RNA biogenesis [BR:
acos03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
131263446
mRNA cycle factors
Common to processing body (P body) and stress granule
131263446
DNA replication proteins [BR:
acos03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
131263446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
131263446
NCBI-ProteinID:
XP_058121630
LinkDB
All DBs
Position
2:23779740..23787327
Genome browser
AA seq
1155 aa
AA seq
DB search
MEYSSNDVKQLFRSVYTLVKGQDERKATLTAKEILDPSFLLSHRLLVAQCIQLMFEDFEN
VGKKSREILWRKGYYDVIYVLKRQKGRTTGAVLQRATDQLIREGINYLKAIVLRFAELFH
LDMMRFLVDYGLLEDYDDEALRQESSCYSLLQLRADDGTQKNELYTKQEISYALETIHSL
LISLGDLHRYQLEFNIGNRVEVLERTRNFYLEAFKLNPKIGMAQNQLGMLVTGQNCNLDA
VYHYLYSLCCAIPFECSETNVSNIFQRNIRHLENGGSGIADDAGLGEGDDRAIEDFIATF
LLVVDVFFYDKDVTDFTALCHSVLIDFKKVLGLRQLLDEYYMTEDMIFKIVSILFFCMHR
IRLSNSDKIYSLNAFLVALCSELLEYCTMGIEKWMVEQVREDNRFREQYARQYQTYDEQV
HRARSTLKSHGSGMMFSKDQKSSSGVEEGTASQDSHGTANKENVGNTLDGKGKSLAKRDR
GSTKEEYGGTDDMRSKKHSRRRRRAFSNASESEDENDEEEARYEDDSDDYSDGSEPDTES
EVEEEADDDDEADIMSLSSFGSYDEYSDDEDDDEERDERGRERDNDKQPLPTAQRSNEDK
NPRSGEERRASGSVPDEQLKFKKRYNKPNPNIVLEFAHCERTLRSLKLLFDWMLSDNLDV
LHNCYQSNPEFLHNIMKLLNYFNLDVLTNRFYFTRDMITVPGLRDDLQTIFNERRSIPLQ
EDVAMKRFPLFELAQDGLAWETSYKLAISREDESFLRLMKLVDFGFAVCKSKKFCYSFLT
KTREFSFRSGGVAGGGRKKQKGGGGQKGSQQQRGGGNKNRTNLKKGDEAKRRSDWNAGGD
GANRNQRVGYDGRRGVTARREHRNGRGVLPDVDGDAAFRLSREGKRNRIRQYKREAFAEA
NGDGNDAPTLFTKKGYLRNRANGGILQRCAKKEEVNGCVSSVKDGEEQQAHRPEQEKKQR
KEGKDLSAVMGRLWLENEVETLESKLKKRPVNVTLTPYLVLDSKCLTEYTAIVKNLVKTK
KFVVLIPSAVLSDLDELKKHSEGARNAIKWLEIEFSKGNRFLRTQKNNESLPMPLVKIPK
KLDRDGSVFQQIVQFCNHIVTNHADKDCTDIITYLSGDSLYDRKLGNGSSYTGILEAIPV
KFEQIVTFYSSYKRK
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atggaatattctagcaacgacgtgaagcagttgttcaggtcggtctataccctcgtgaaa
ggacaggacgagcgtaaggcgacattgacggccaaagagatattggatccgagcttcctg
ctcagccatcgcctactagtcgcgcaatgtatccagctgatgtttgaggatttcgaaaat
gtcggcaaaaagtctcgtgaaatcctctggcgcaagggttactacgatgtgatctacgta
ctgaagcgtcagaagggtcgaacgactggagccgtactgcaacgtgcgaccgatcagttg
atccgggagggaatcaactacttgaaggccatcgtgcttcggtttgcagagctcttccac
ttggatatgatgcgattcctggtcgactatggtctgctggaggactacgacgatgaagct
ctgcggcaggagtcatcgtgttactcactactgcagcttcgtgcggatgacgggacgcaa
aagaacgaactgtacaccaagcaagagatatcctacgccctggaaactatacactcgctg
ttgatttcgttgggcgatctgcatcgctatcagcttgagtttaacatcggcaaccgggtg
gaggtgctggaacgcacgcgcaacttctacctggaggcattcaagctgaaccccaagatc
ggaatggcgcagaaccagctgggaatgttagtgaccgggcagaattgtaacttggatgcc
gtctaccactacctgtactcgctgtgctgtgcgattcccttcgagtgcagcgaaaccaat
gtgagcaacatctttcagcggaacattcgccacctggagaatggcgggagcggcatcgcg
gatgatgccggtctgggcgaaggagatgatcgtgcgatagaagatttcatcgcgacgttc
ttgctggtggttgacgttttcttttacgacaaggacgttaccgactttaccgccctgtgc
cattcggtgttgatcgactttaaaaaggtgttgggcctccggcaacttcttgacgagtac
tacatgacggaggatatgatcttcaagatcgtgtcgattctgttcttctgcatgcaccgc
attcgtctgagcaactcggacaaaatatacagtctgaacgcgttcctggtggcgctgtgc
tccgagctgctcgagtactgcacgatgggcatcgagaagtggatggttgagcaagtgcgc
gaggacaatcggtttcgcgagcagtatgcccgccagtatcagacgtacgacgaacaagtc
catcgtgcccggtcgacattgaagtcgcacggttccggcatgatgttttcgaaggatcaa
aaatcttcgtccggcgttgaggagggtacggcaagtcaggacagccatggaacggccaac
aaggagaacgtcggcaacacattggatggtaaaggaaagtcgcttgctaaacgagaccgt
ggttcaacaaaggaggagtatggtggtaccgatgatatgcgttcgaagaagcattcgcgt
cgccgacgtagggcgttctcaaacgccagcgagtcagaggatgagaacgatgaagaagaa
gcgcgctatgaggacgattcggacgattactccgatggatcggagccggacacggaaagt
gaagtagaagaagaggcagatgatgacgacgaggcagatattatgtcgctgtccagtttc
ggatcgtatgatgaatactccgacgacgaggatgacgacgaggaacgggacgagcgtggt
cgtgaacgtgacaacgacaagcaacctcttccgaccgctcaacgaagcaacgaggataag
aacccgcgcagtggcgaagagcgcagggcgtcgggcagcgttccggacgagcagctgaag
ttcaagaagcgctacaacaaaccgaaccccaacatcgtgctggagtttgcgcactgcgaa
cggacgctgcgctcgctaaagctgctgttcgattggatgttgtccgacaatctggacgtg
ctgcacaactgctaccaatcgaatccggaattcctgcacaacatcatgaagctgctgaac
tacttcaatctggacgtgctgaccaatcggttctacttcacgcgcgacatgatcaccgtg
ccgggtttgcgagacgatctgcagacgatcttcaacgagcgtcgttcgattccgttgcag
gaggacgtcgccatgaaacgcttccctctcttcgaactggcgcaggatggcctcgcttgg
gaaacatcctacaagctagcgatcagtcgtgaagatgaaagtttccttcggctgatgaag
ctggtcgacttcggtttcgcggtgtgcaagtcgaagaagttttgctactccttcctcacc
aagacgcgtgagttcagcttccgctcgggaggtgttgctggaggtggacgtaagaaacag
aagggcggtgggggacagaagggctcgcagcaacagcggggaggtggcaacaaaaaccgc
accaaccttaagaagggcgatgaggccaaacgacgatcggactggaatgcaggtggagac
ggtgcaaatcgtaaccaacgtgtgggttacgatggccgacgaggtgtgaccgctcgccga
gagcatcgcaacggacgtggagtcttaccagatgtggatggtgacgctgcgtttagactt
tcgcgagagggcaagcgcaatcgcattcgccagtacaaacgggaagcttttgctgaagcg
aacggcgacggcaacgatgctcctacactcttcacgaagaagggttatcttcgcaatcga
gcaaacggcggaattctgcagcgttgcgctaagaaagaagaagtgaatggctgcgttagc
tcagtaaaggacggcgaagagcaacaggcacatcgtcccgagcaggagaaaaagcaaaga
aaagaaggaaaggaccttagtgcggtcatgggcagactgtggctggagaacgaggtggaa
acgctcgaatcgaagctcaaaaaacgcccggtgaacgttactttgacaccatatttggtc
cttgactcgaaatgtctgaccgagtacacggcgatcgtgaaaaatttggtcaaaacgaag
aagttcgtcgtgttgattcctagcgctgtattgagcgatctggatgagctgaaaaagcat
agcgaaggagcacgcaatgccatcaagtggctggagattgaatttagcaagggcaaccgg
ttcttgcgcacgcagaaaaataacgaatcgctgccgatgccgttggtgaagatcccgaaa
aagttggatcgcgacggttcggtttttcagcagatcgtacagttctgcaaccacattgtc
accaaccacgcggacaaggattgtaccgacataatcacctacctgtccggcgatagcctg
tacgatcgcaagctcggcaatggcagtagctacaccggcattctggaggccatcccggtg
aagttcgaacagatcgtcacattctactccagctacaaacggaaatga
DBGET
integrated database retrieval system
