Anopheles coustani: 131266728
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Entry
131266728 CDS
T10908
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
acos Anopheles coustani
Pathway
acos03020
RNA polymerase
acos03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acos00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
131266728
09124 Replication and repair
03420 Nucleotide excision repair
131266728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acos03021
]
131266728
03400 DNA repair and recombination proteins [BR:
acos03400
]
131266728
Enzymes [BR:
acos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
131266728
Transcription machinery [BR:
acos03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
131266728
DNA repair and recombination proteins [BR:
acos03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
131266728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
131266728
NCBI-ProteinID:
XP_058125326
LinkDB
All DBs
Position
2:complement(23360558..23367321)
Genome browser
AA seq
1878 aa
AA seq
DB search
MSGDSKAPLRTVKRVQFGILSPDEIRRMSVTEGGIQYAETMEGGRPKLCGLMDPRQGVIE
RTSRCQTCAGNMTECPGHFGHIDLAKPVFHIGFITKTIKILRCVCFYCSKMLVSPTNPKI
KEIVMKSKGQPRKRLAYVYDLCKGKKICEGGEDMDMTKDPSAADASKKQGHGGCGHYQPS
IRRTGLDLMAEWKEVNDENQEKKIQVSAERVYEILKHITDEECYVLGMDPKFARPDWMII
TVLPVPPLAVRPAVVMFGATKNQDDLTHKLSDIIKANNELKKNEATGAAAHVIAENIKML
QFHVATLVDNDMPGMPKAMQKSGKPLKAIKARLKGKEGRIRGNLMGKRVDFSARTVITPD
PNLRIDQVGVPRSVAQNMTFPELVTPFNIDRMQELVRRGNSQYPGAKYIVRDNGERIDLR
FHPKSSDLHLQCGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTS
PYNADFDGDEMNLHVPQSMETRAEIENIHITPRQIITPQANKPVMGIVQDTLTAVRKMTK
RDVFIEKEQMMNLLMFLPTWDGKMPQPCILKPKPLWSGKQIFTLIIPGNVNMIRTHSTHP
EEENDGPFKWISPGDTKVMVEHGELIMGILCKRTLGTSAGSLLHIVFLELGHEIAGRFYG
NIQTVVNNWLLLEGHSIGIGDTIADPQTYSDIQRAIKKAKEDVIGVIQKAHNMELEPTPG
NTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSDINISQVIACVGQ
QNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFYFHAMGGREGLIDT
AVKTAETGYIQRRLIKAMESVMVNYDGTVRNSVGQLIQLRYGEDGLCGEAVEFQNLPTIK
LSNKVFEKRYRFDPTNERTLRRIFNEDVIKELTESTSVIQEIEAEYEQLLRDREALRQIF
PNGESKVVLPCNLQRMIWNVQKIFHINKRSPTDLSPLKVIQGVRDLLQRCVIVAGTDRLS
KQANENATLLFQCLVRSTLCTKYVAEEFRLNNEAFEWLIGEIETRFQQAQVNPGEMVGAL
AAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKRPKAPSLTVFLTGGAARD
AEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQRTVIAEDQEFVNVYYEMPDFDPTRISPW
LLRIELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNADKLVLRIRIMNEDNKFQE
NEEENMDKMEDDMFLRCIEANMLSDMSLQGIEAIGKVYMHLPQTDAKKRIVITPEGEFKP
IGEWLLETDGTSMMKVLSERDVDPVRTYSNDICEIFSVLGIEAVRKSVEKEMNNVLQFYG
LYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLNDAAAHAEVDP
MRGVSENIILGQLPRMGTGCFDLLLDAEKCKLGMEIPHTSILGGTGMFFGSAATPSMTPW
QQSATPGYGGWSPSGPASGMTPGGPSFSPSAQSDASGMSPSSWSPIRGSPSSPGPSMSPY
PPSSPSMSPSYSPSSPNYAPNSPGGASPSYSPTSPCYSPPSPQYSPGSSNYSPSSPNIHS
ATQNYSPTSPSYSPMSPMHPTSASAYGSPAYSPTSPSYSPTSPSYSPSSPVFSPTSPSYS
PSSPSYSPTSPSYSPTSPSYSPTSPNFTPVTPSYSPSSPNYSPTSPHYSPASPSYSPSSP
KYSPTSPSYSPTSPSYIGSPHYTPASPQYAQTSPNYSPTSPSYSPSSPQHSPGSSSNHYS
LGSSSYSQTPAPYSPNMSSYSPSSPKYSPTSPVYTSSSPTYSPSSPAYSPTPQGYSPSSP
ASPTYSPTSPSYDDSNED
NT seq
5637 nt
NT seq
+upstream
nt +downstream
nt
atgagtggagattcgaaggcaccgttgcgtacggtgaagcgcgtacagttcggcatccta
tcgccggacgagatccgccggatgtcggtgacggaaggtggcatacagtatgcggaaacg
atggagggtgggcggccgaagctgtgtggcctgatggacccacggcagggtgttatcgag
cgaacgtcgcgttgtcagacgtgtgcgggcaacatgaccgaatgcccgggccatttcggg
cacatcgatctcgccaaaccagtctttcacatcggtttcatcacgaagacgataaaaatc
cttcgctgcgtttgtttctactgctccaagatgctcgtctcaccgaccaaccccaagatt
aaggaaatcgtcatgaagtcgaaagggcaacctcgcaagcgcctcgcgtacgtttacgat
ctgtgcaaaggcaagaaaatctgcgaaggtggtgaagatatggacatgacgaaagatccg
agcgctgcggatgccagcaaaaagcagggccacggtggttgcggtcattatcagccctct
atccggcgcaccgggcttgacctgatggccgagtggaaggaggtgaacgacgaaaatcag
gagaagaaaatccaggtttcggccgagcgggtgtacgagatcctgaagcacattaccgac
gaagagtgctacgtgctcggtatggatccgaagttcgcccgtcccgattggatgatcatc
accgtactaccggtaccaccgttagccgtgcggccggccgtcgtaatgttcggggcgacc
aaaaatcaggacgatttgacgcacaaactttccgacatcatcaaggcgaacaacgagctg
aagaaaaacgaagcaaccggcgccgcggcacacgtgattgcggaaaacatcaaaatgctt
cagtttcacgtggccacgctagtcgataacgacatgccgggaatgccgaaggcaatgcag
aaaagcggcaaaccgcttaaggcgatcaaagcgcgtctgaagggaaaggaaggtcgtatc
cgtggtaatttgatgggtaagcgtgtagatttttcagcccgtaccgtcatcacaccggat
ccaaacttgcgaatcgatcaggtcggagtgccgcgttcagtcgcgcaaaacatgaccttc
ccggagttggtgaccccgttcaacatcgatcgcatgcaggagctagtgcgcagaggaaat
tcgcagtacccgggcgctaagtacatcgtgcgagacaacggtgagcgtatcgatctgcgc
tttcacccgaagtcatccgatctgcaccttcagtgcggctacaaggtggagcgccatcta
cgcgacgacgatctggtcatcttcaaccgacagccaacgctacacaagatgagtatgatg
gggcatcgtgtgaaggtgctaccctggtcgacgttccgaatgaacctcagctgtacctca
ccctacaacgccgatttcgacggtgacgagatgaacctgcacgtcccgcaatcgatggag
acgcgtgcggaaatcgaaaacattcacattaccccgcgccagattattacgccgcaggcg
aataaacctgtcatgggtattgtgcaggacacgctgacggcggtgcgaaagatgaccaag
cgggatgtgttcatcgaaaaggagcaaatgatgaacctgctcatgttcctgccgacctgg
gatggcaagatgccgcaaccgtgcatcctcaaaccgaaaccactgtggtcgggtaaacaa
atcttcaccctcatcattcccggcaacgtgaacatgatccgtacgcattcgacgcacccg
gaggaggaaaacgacgggccgttcaagtggatttcgcccggcgacaccaaggtcatggtc
gagcacggtgagctgatcatgggcatcctgtgcaaaaggaccctcggaacgtcggccggc
tcgctgctacacatcgtgttcctcgagctgggccacgaaattgccggacgattctacggc
aacattcagacggtcgtcaacaactggctgctgctggagggtcatagtatcggtatcggt
gatacgattgccgatccgcagacctattccgatattcagcgtgcgatcaagaaggccaag
gaggacgtgataggcgtgatccaaaaggcgcacaacatggagctcgaaccaacgcccggt
aacacgctgcgacagacgttcgagaaccaggtgaaccgtatcttgaacgacgctcgtgac
aaaactggtggctccgccaagaagtcgctcactgagtacaacaacctgaaggctatggtc
gtgtctggttcgaagggttccgacattaatatctcacaggttattgcttgcgtgggtcag
cagaacgtcgaaggtaagcggattccattcgggttccgcaagcgcaccctgccacatttc
atcaaggatgattacggtcccgagtcgcgtggcttcgtggaaaattcgtacctggccggg
ctgacgcctaccgagttttacttccatgccatgggtggtcgtgagggtttgatcgatacc
gccgtcaagacggccgaaaccggttatatccagcgtcgtctgatcaaggcgatggagtcg
gtaatggtcaactatgatggtacggtgcgtaactcggtcggtcagctaattcagctgcgt
tacggcgaagacgggctgtgcggtgaagcggtagagttccagaatctaccgacgatcaag
ctctcgaacaaggtgttcgagaagcgctaccgattcgatccaaccaacgagcgcacgctt
cggcggatcttcaacgaggatgtcatcaaggagctgacggaatcgacctcggtcatccaa
gagatcgaggcggagtacgagcagctgttgcgcgaccgggaagcgctccggcagatcttc
ccgaacggtgagtcgaaggtggtactgccgtgcaacctgcagcgtatgatctggaatgtg
cagaagattttccacatcaacaaacgctcaccgacggatctgtcgccactgaaggtgatc
caaggcgtgcgagatctgctgcagcgctgcgtcatcgtggccggcacggatcggctgtcg
aagcaggcgaacgaaaacgcaaccctgctgttccagtgtctcgttcgctcgaccctctgc
accaagtacgtcgcggaagagttccggctgaacaacgaggcgttcgagtggttgatcggt
gaaattgagacacgcttccagcaggcccaggttaacccgggtgaaatggtgggtgccttg
gccgcacagtcccttggagagccggccacacagatgacactgaacacgttccactttgcc
ggtgtgtcgtcgaagaacgtaacactcggtgtgcctcggttgaaggaaattatcaacatc
tccaagcgaccgaaggccccctcgctgacggtgttccttaccggtggtgcggcccgtgac
gcggagaaggcgaagaatgtgctctgtcggctggagcacacgacgctgcgcaaggtcacg
gccaatacggcaatctactatgatcccgacccgcagcgcacagtgatcgcggaggatcag
gagtttgtgaacgtgtactacgagatgcccgacttcgatccgacccgcatctcgccgtgg
ctgctgcgtatcgagctggaccgcaagcgcatgacggacaagaagctcacgatggagcag
atcgcggagaagatcaacgccgggttcggcgacgatctgaactgcatcttcaacgacgac
aacgcggacaaactggtgctgcgcatccgtatcatgaacgaggacaacaagttccaggag
aacgaggaggaaaacatggacaagatggaggacgacatgttcctgcggtgcatcgaggcg
aacatgctgtcggacatgtcgctgcagggcatcgaggcgatcggcaaggtgtacatgcat
ctgccgcagacggacgcgaagaagcggatcgtcatcaccccggagggtgagttcaagccg
atcggggagtggctgctcgagacggacggtacgtccatgatgaaggtgctgagcgagcgg
gacgtcgacccggtacgcacttacagtaacgacatctgcgagatcttctccgtgctcggt
atcgaggcggtgcgtaagtcggtcgagaaggaaatgaacaacgtgctgcagttctacggt
ctgtacgtgaactaccgccatctggcgttgctttgtgacgtgatgacggccaagggtcat
ctgatggccatcacccgacacggtattaaccgacaggatacgggcgcgctgatgagatgt
tcgttcgaggaaacggtggacgtgctgaacgacgcggcagcgcatgccgaggtcgatccg
atgcgtggtgtgtcggagaacatcatcctcggtcagctgccacgcatgggaaccggttgc
ttcgatctactgctggacgccgaaaagtgtaagcttggtatggagattccgcacacttca
attctgggcggaacgggaatgttctttggatcagcggccacaccaagcatgacgccgtgg
cagcagtcggccacacccggttacggtggttggtctccgtcgggaccagcaagtggtatg
acgccgggaggtccaagcttctctccctcggcacaatcggacgcatcgggaatgtcacct
tcatcttggtcaccgatccgcggatcaccgagttctccgggaccgtcgatgtcgccgtac
ccaccatcgtcaccctcgatgtcgccatcgtattcaccgagcagtccaaactatgccccg
aactctcccggcggtgcgtcaccgtcctactctccgacgagtccttgctactcaccgcca
agtccacaatattcccccggcagttcgaactactcgccaagcagccctaacattcactcg
gccacccagaactactctcccaccagcccctcgtactcgcccatgtctccgatgcatccg
acgagcgcctccgcctacggtagcccagcctactcccccaccagcccctcgtattcaccc
acctcaccgtcctactctccgtcgtcacccgttttctcacccaccagcccctcctactca
ccctccagcccgtcctactcacccaccagcccctcgtactcacctacctcgccgtcctac
tcgccaacatcgccaaactttacgcccgtcacgccgtcctactctccctccagtccgaac
tattccccgacctcaccgcactactctccagcctcaccgagctattccccctcttcgccc
aaatattcaccgacctcgccgagctattcgcccacctccccgtcgtacattgggagcccg
cactacaccccggccagcccgcagtacgcacaaaccagcccgaactattcgccaacgtca
cccagctactcgccctcgtcgccgcagcactcacccggcagcagcagcaaccactacagc
ctgggctcatcctcgtactcgcagacacccgctccctactcgcccaacatgtcctcgtac
tcaccgagcagcccgaagtactccccgaccagtcccgtctacacgtccagctcgcctacc
tactcgccatcgtcaccggcgtactcgcccacaccgcaaggctacagtccgtcgagtccg
gcaagtccaacctactcaccgaccagcccttcgtacgacgatagcaacgaggattaa
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integrated database retrieval system
