Anopheles coustani: 131271375
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Entry
131271375 CDS
T10908
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
acos Anopheles coustani
Pathway
acos03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acos00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131271375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acos03021
]
131271375
03019 Messenger RNA biogenesis [BR:
acos03019
]
131271375
Transcription machinery [BR:
acos03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
131271375
Messenger RNA biogenesis [BR:
acos03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
131271375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_3
zf-CCHC
zf-CCCH_4
zf-CCHC_4
Nab2-like_zf-CCCH_
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
131271375
NCBI-ProteinID:
XP_058128768
LinkDB
All DBs
Position
3:42820725..42822161
Genome browser
AA seq
291 aa
AA seq
DB search
MDLLIANVDSWTFKIEKDLNEQYGALALPFPGMDKSTAAVCLFFNASDGTECQKGNACPF
RHIRGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDP
ESKIKDCPWYDRGFCRHGPNCRHRHVRRVLCNNYLAGFCPDGPECKYMHPRFELPPPPEI
KDQTPKRPTTCHYCGELGHKASYCPKMPQEQREATQRMEDAKYRALGYYKHRMHQEGGNN
AGGEEGAFVPQKPPPRPIEEITCFKCGLKGHYANKCTKGHLAFLSNSVQRK
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggatctactaatagcaaatgttgatagttggacatttaagattgaaaaagatctgaac
gagcaatatggagctctcgcacttcctttccccggcatggacaaatccaccgccgccgtc
tgtctatttttcaatgcatcggatggaacagaatgccagaaaggaaacgcgtgccccttc
cggcacatacgcggcgatcgcaccatcgtgtgcaaacattggctgcgaggtctatgcaaa
aagggcgaccagtgtgaattcctgcacgaatacgatatgaccaagatgcccgaatgttac
ttctactctcgcttcaacgcgtgccacaacaaggaatgtcccttcttgcacatcgatccg
gaaagtaagataaaagattgtccctggtacgatcggggattctgccggcacggtccgaac
tgtcgacaccggcacgtccggcgagtgctgtgtaataactaccttgccggcttctgtccc
gatggtccggaatgtaagtacatgcacccgcggtttgagcttccaccacctcccgaaatc
aaggatcaaacaccgaaacgtccaaccacctgtcattactgtggagaactgggtcacaaa
gcatcgtactgcccgaaaatgccccaagagcaacgggaagctacacaacgcatggaagat
gcaaaataccgtgcacttggatattacaaacatcgaatgcaccaggaaggaggaaacaat
gctggcggagaagagggtgcttttgttccacagaaaccaccgccacgtccaatcgaggaa
attacttgctttaaatgcggcctcaagggacattacgcgaataagtgtacaaaaggccac
ctggctttcctttccaacagtgtacaaaggaagtag
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