Acinetobacter corruptisaponis: QLH32_03480
Help
Entry
QLH32_03480 CDS
T10473
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
acot Acinetobacter corruptisaponis
Pathway
acot03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QLH32_03480 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acot03400
]
QLH32_03480 (mfd)
Enzymes [BR:
acot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QLH32_03480 (mfd)
DNA repair and recombination proteins [BR:
acot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
QLH32_03480 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRCF
UvrB_inter
DEAD
Helicase_C
CarD_TRCF_RID
MFD_D3
ResIII
SNF2-rel_dom
ERCC3_RAD25_C
Glyco_tran_WecG
RecG_dom3_C
UB2H
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WHP06541
LinkDB
All DBs
Position
complement(689912..693373)
Genome browser
AA seq
1153 aa
AA seq
DB search
MFQQEISQLNLQQFKAGEKRWIGSLLGSSAALLFKEIATQSSNLYMVVARNNQHLVQLES
ELEFYGIKPTIFPDWEILPYDRLSPHQDIVSERLAILSNMPQKGILLISASTLAQRVAPY
SWVVGEHFDIKVGQKLDLEVQKKQLVQAGYRLVDTVYDHGEFAVRGSIMDIFASGQEQPI
RIDLFDDEIDSLKFFDPETQRTTESLKNFTVLPAKEFPLKEGRSTFRDRYAESFPTANPK
KNPIYQDVLEGIATPGLEFYLPLFFDKKLMEAQSILTTYLPKNCVVITNNEVEDELINFW
KEVVRRYEDRRHNIDQPILPPEELFLMPNHVLQALNQFPRILASAEAFEAKAGVLNLAAE
QPPKLAVDPKKQQPFEAVKHYVDQARHPVLLVAESAGRRETLKDALRAVLGEIQTVDSFA
QFQKNQLQVAITSAPLDRGLLLTDQLSVISENQLYEHRVVQRRRKRQQEVSEEFLVRSLT
ELSIGAPVVHIDHGVGRYAGLMTLEIDQQDHEFLQLDYADGAKVYVPVTNLHLISRYSGG
DPDLAPLHKLGTDTWNKAKRKALEQIHDVAAELLHIQARRQSKPGFAFEMDHTGYMQFAS
GFAYEETLDQANAIEATLHDMQLAKPMDRLVCGDVGFGKTEVAMRAAFVAVQNNKQVAVL
VPTTLLAQQHYESFKDRFADTAVRIEVLSRFGSNKTHLKTIEDLAEGKVDIVVGTHKILQ
ENIQFKNLGLMIVDEEHRFGVRDKERIKALRADVDMLTLTATPIPRTLNMAFSGMRDLSI
IATPPARRLAVKTFVQEHTDDSIKEAILRELLRGGQVYLLHNEVETIERAAETIRHLVPE
ARVAVAHGQMRERELEQVMQQFYHKDYNVLVCSTIIETGIDVPNANTIIIERADKLGLAQ
LHQLRGRVGRSHHQAYAYLLVPSIKHLKGDAEKRLDAIQRASTLGAGFMLATEDLEIRGA
GELLGEQQSGSMQAIGYSLYMEMLEKATKAIQKGKTPNFDAPLSLTAEINLHMPALIPDD
YLGDVHQRLLFYKRISNTDTQEKLDNIRMELIDRFGIPPQPVKQLFSVHQIRLRAEQLGI
TKVDINSNGGYIEFSPDTPVQAISIIQLMQKNPTYYRMEGGQRLKVMVQLAEYDKRIQFI
VELLNKLLGELHS
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaacaagaaatctctcaattaaacctacaacaattcaaagcaggcgaaaaacgc
tggatcggttcattgctggggtcatctgctgcattattatttaaagaaattgccacacaa
agctcaaatctatatatggttgtggcaaggaataaccagcatctggttcaactggaaagt
gaactggaattctatggcattaagcccaccatttttcctgactgggaaattttgccctat
gatcgtttgtcaccgcatcaggatattgtgtcagaacgtttggctattctgtccaatatg
ccacaaaagggcattttactgatttcggcaagtacacttgctcaaagggttgcaccatat
tcatgggttgtgggcgagcactttgatattaaggtgggtcagaaacttgatctggaagta
cagaaaaagcaattggtacaagcaggctatcggttggttgatacggtgtatgatcatggt
gaatttgcggttcgtggcagcatcatggatatttttgcttctgggcaagaacaaccaatc
cgtattgacttatttgatgatgaaattgacagtctaaaattcttcgatccagaaacgcag
cgcaccactgaatccttaaaaaactttactgttttacccgccaaagaatttccacttaaa
gaggggcggtctacctttagagaccgttatgcagaaagttttcccactgccaatcctaag
aaaaatccaatttatcaggatgtcctagagggcattgcgaccccaggtctggaattttac
ctaccattattctttgataaaaagctaatggaggcgcaaagtatcctcacaacctactta
ccaaagaattgcgttgtcattacaaataatgaagttgaagatgaactcatcaacttctgg
aaagaagtggttcgtcgttatgaggatcgtcgtcataacattgatcaaccgattcttcct
cctgaggaattatttttaatgccaaatcatgtgttgcaggcattaaatcaatttccacga
atcttagcctcagcagaagcatttgaagccaaagcaggtgtgctcaatctagctgctgaa
caaccacccaaacttgcagttgatcctaaaaagcaacagccttttgaggcagtgaaacat
tatgttgatcaagctagacatccagttttattggttgcggaaagtgcaggccgccgtgaa
actttaaaagatgctttgcgggcggtattaggtgaaattcaaaccgtagacagttttgcc
cagttccagaaaaaccagttacaggttgccattaccagtgcgcctttggatcgtggttta
ttgctgactgatcagctttcagtgatttctgaaaatcagctctatgaacatcgtgtggta
caacgtcgccgtaaacgccagcaggaagtgtctgaagagtttctggttcgtagcctgact
gagctgagcattggtgcgcctgtggtacatattgatcatggtgttggacgttatgcaggc
ttgatgacgctggaaattgatcagcaggatcatgagtttttacagcttgattatgctgat
ggcgcaaaagtttatgtccctgtgaccaatttacacctgatcagtcgttatagtggtggc
gaccctgatcttgcaccgctacataaattaggcacagatacttggaataaggcgaagcgt
aaagctttagagcaaatccatgatgttgcggctgagttgttgcatattcaggcacgccgt
cagtccaagccaggctttgcctttgaaatggatcatacaggctatatgcaatttgccagt
ggctttgcttatgaggaaacacttgatcaagccaatgccattgaagcgaccctacatgat
atgcaacttgctaaaccgatggatcgtctggtttgtggtgatgtgggctttggtaaaaca
gaagttgccatgcgagctgcatttgtggcagtacaaaataataaacaggttgctgtactg
gttccaaccacgctattggcgcagcagcattatgaatcctttaaagaccgctttgctgat
accgctgttcggattgaagtattatcccgttttggtagcaataaaactcatctcaaaact
attgaggatttagctgagggcaaagtggatatcgtggtgggaacacacaagattctgcaa
gaaaatattcagtttaaaaaccttggactgatgattgtcgatgaagaacatcgttttggg
gtgcgggataaggaacggatcaaggctttacgtgctgatgtcgatatgttgactttaact
gcgacaccgattccacgtaccctgaatatggcattttctgggatgcgtgatctctccatt
attgcgacaccgcccgcacgacgtttagcggtgaaaacctttgtacaggaacacacggat
gactcgatcaaggaagcgattctgcgtgaactgttgcgtggtggtcaggtctatttgctg
cataatgaagtggaaaccattgaacgagcagctgaaacgatccgtcatctagtgccagaa
gcacgagtggcagtggcgcatgggcaaatgcgtgaacgtgaactggaacaagtgatgcag
cagttctaccataaagattataacgttctggtttgttcaaccattattgaaacagggatt
gatgttccaaatgccaataccattattattgaacgagccgataaattgggtttagcgcag
ttgcatcaattgcgtggtcgtgtaggacgttcacatcatcaggcctatgcttatttgtta
gtgccttccattaaacatcttaaaggtgatgcggaaaaacgtctggatgccattcaacgt
gcttcaaccttaggcgctggatttatgctggcaaccgaagatctggaaatccgtggtgca
ggtgaattactgggtgaacagcaaagcggctcgatgcaggcgattggctatagcctgtat
atggaaatgctggaaaaagccactaaagccattcaaaaaggcaagactccgaacttcgat
gcgccattgtcattgacggctgaaatcaacctgcacatgccagccttgattcctgatgat
tatctgggtgatgtacatcaacgcttattgttctataaacgcatcagtaacaccgatacg
caggaaaaactcgataatatccgtatggagttgattgaccgttttggtattccaccacaa
cccgttaagcaactattcagcgttcatcaaatacgtttaagggcagagcaactgggcatt
accaaagtggatatcaatagcaatggcggttatatcgaattttcgcccgatacacccgtg
caggcgatcagcattattcagcttatgcagaaaaatccgacctactaccgtatggaaggt
ggtcagcgcctgaaagtgatggtacaactggctgaatatgacaaacgtattcagtttatc
gttgaactactgaataaattgctgggtgagttgcatagttag
DBGET
integrated database retrieval system
