Acinetobacter corruptisaponis: QLH32_03870
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Entry
QLH32_03870 CDS
T10473
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
acot Acinetobacter corruptisaponis
Brite
KEGG Orthology (KO) [BR:
acot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acot03019
]
QLH32_03870 (hrpA)
Enzymes [BR:
acot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
QLH32_03870 (hrpA)
Messenger RNA biogenesis [BR:
acot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
QLH32_03870 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
WHD_HA2
AAA_22
AAA_19
nSTAND3
T2SSE
NACHT
nSTAND_NTPase5
PhoH
ResIII
AAA_25
SLFN-g3_helicase
AAA_30
TsaE
SRP54
AAA_23
Motif
Other DBs
NCBI-ProteinID:
WHP06615
UniProt:
A0ABY8S4K0
LinkDB
All DBs
Position
complement(773406..777260)
Genome browser
AA seq
1284 aa
AA seq
DB search
MQSHLNVDQWVMARDRHRLNRLRKDKKTQPAEIEKLFEQSNHKVKQRLARLPKIKLNQDL
PVTQYADRLIEAIQKHQVIIVAGETGSGKTTQLPQIAMLAGRGLTGMIGHTQPRRLAARS
VSQRIAEEVGEKLGESIGFKIRFNEQGSQDSIVRLMTDGILLAELTNDRFLSKYDTIIID
EAHERSLNIDFIMGYLKQLLPKRPDLKVIVTSATLDVNRFSQYFNDAPIFEVEGRSFPVE
VRYRPISEMSIVGSDDDEFDDFEENLPRAVVQAVEECFADAEEKGHPEHADILIFASTEQ
EIRELQETLQKHGPRHTEVLPLYARLALAEQQKIFSPSGKGRRIIIATNVAETALTVPNI
RYVIDSGFSRISRYNYRSRVQRLPIEAISQAAANQRKGRCGRIAAGVCIRLYSEEDFLSR
PEFTEPEIKRTNLASVILQMQSLGLGNLEDFDFIEPPDFRLVNDGRKLLVELGALSERKN
ELTKVGQMMARMPIDPRLARMIIGGAHFGVLKETLIIVSALAIQDPRERPADKQMQADQK
HALFKEADSDFLFYLKLWNTLQTSPDTQSENKRRQFARQHFLSWLRLREWKQTHQQLVEL
AENLKLSFNEKGANYENLHRALLTGLLSFIANKTDERNTFMAVRQQKAKVFPASTLHKTN
TAWVMAFEMVETSQVYLRTLAKIDPEWILLAARDLLKYHYFEPHWSKKAGIVNAYAQISL
FGLIIEPKRLVNFEKVDQPAAHEIFLRDALTTGNLGVTPPFLKHNLLKLEEVERVEDKLR
RRDLVVDEETIYQFYAEKVPEEIASRRSFEDWRATVETENPRYLFVEDDALWMNDRPTTQ
QFPDYLHNGQLRLAASYRFDPSHDEDGATVKIPVQALPQVDEKQWSWGIPGWRQDLIEAL
LKALPKDKRRNLVPIPDTARKLMQGVDATHLREHLFSYLAFALRGEQITEKDFSFERIDQ
YLVPFIKVLDEKGKSIAQGRDLDELKARCRVETHRPVKQQKGEFQTFPESFVFEASQKVT
GVIVKQYQALVPTKVFAELDAKDESGVVIQTFNDQDEAIKQHREGIIRLVHMQLGDLIRQ
LKKQISKPLALAYSPLGERARLEQMLVYATLQVSIQELPKNADEFQKLLMDTKKHFLGNG
QQVLTDITEIFTQWQKIRRELLVLDQNIFGRSVDDIEDQLDLMSLADFVYSRPAEIWQEY
PRYLKALLLRLDRLPNNLQRDLAAIDDVDPWMDKVFKFKNDPRIKELYLMLEELRISLFS
QPMKTKLPISPTRLQKLWDRLAIG
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
gtgcagagtcatttaaatgtagatcaatgggttatggcacgtgaccgccaccgtttaaat
cgactgcgcaaagataaaaaaacacaaccagcagaaatcgaaaaactgtttgaacagtct
aaccacaaagtcaagcaacgtcttgcacgtctccccaagatcaagctcaatcaggattta
cctgttacccagtatgcagatcgcttgatcgaagcgattcaaaagcatcaggttattatt
gtggcaggtgaaacagggtcgggtaaaacgactcagctaccgcagattgccatgctggca
ggtcgtggtcttacgggcatgattgggcatactcagccacgtcgtctggctgcgcgtagt
gtttcgcagcgtattgccgaagaggtcggcgagaaattgggtgaatccatcggctttaaa
atccgttttaatgaacagggttcgcaggattcgattgttcgtttaatgactgatggtatc
ttgttggctgagctgaccaatgaccgatttctttcaaaatacgacaccattattattgat
gaggcgcatgagcgttcactcaatattgacttcatcatgggctatctcaagcaactttta
cccaagcgcccagatttaaaagtcatcgtgacttccgcgaccttggatgtaaatcgtttt
agtcaatactttaatgatgctcccattttcgaggtcgaaggacgaagctttcccgttgaa
gtgcgttatcgtccaatttccgaaatgagcattgtcggtagtgatgatgacgagtttgat
gactttgaagaaaacttaccgcgtgcagttgttcaggctgtagaagagtgctttgctgat
gccgaagaaaagggtcatcctgaacatgcggatattttgatttttgccagtaccgagcag
gaaattcgcgagttacaggaaaccttacaaaaacacggtccacgtcataccgaagtattg
cctttatatgcacgtttggcactggctgaacagcaaaagatttttagtccgagtggcaaa
ggacgacgcattattattgcgaccaatgtggcggaaacagcactgacagttccgaatatt
cgctatgtcattgatagcggtttttcccgtatctcccgttataactatcgttcacgggta
caacgtttaccgattgaagccatttcacaggcagcagccaatcaacgtaaagggcgttgt
ggtcgtattgcggcaggtgtatgtattcgtttatacagtgaagaggactttttaagccgt
cctgagtttaccgaaccagaaattaaacgaaccaacttggcatcagttattttgcaaatg
caaagtcttggcctgggcaatctggaagattttgattttatcgagccaccagattttcgt
ttggttaatgatggtcgtaaactcttggttgagttgggtgcactcagcgagcgcaagaat
gaactgaccaaagtcggtcagatgatggcacgtatgccaattgacccacgcttggcacgt
atgattattggaggggcacattttggcgtgctcaaagaaaccctgattattgtcagtgcc
ttggcgattcaagacccacgtgaacgtcctgccgataaacaaatgcaggccgatcaaaag
catgctttattcaaagaagcggactcagactttttattctatttaaagctttggaataca
ctgcaaaccagtccagatacgcagtcggagaacaagcgccgtcaatttgcccgtcagcat
ttcttaagctggttgcgtttgcgtgagtggaagcagacccatcagcaattggtggagttg
gcagaaaatttaaaacttagttttaatgagaaaggtgccaattatgaaaacttgcatcgt
gcattattaacaggtttactttcattcattgccaataaaactgatgaacgtaacaccttt
atggcagtacgccagcagaaagccaaagtgttcccagccagtaccttacataagaccaat
actgcctgggtgatggcttttgagatggtggaaacctctcaagtgtatttgagaacctta
gccaaaattgatccagaatggattttgctggcggcacgtgatttattgaaatatcactat
tttgaaccgcactggtcgaaaaaagcgggtattgtgaatgcctatgcccaaatctcacta
tttggtttgatcattgaaccaaaacgtttagtgaactttgaaaaggtggatcaacccgcg
gcacatgaaatctttttacgtgatgcactgactacaggcaatttaggtgttacgccacca
tttttaaagcataacttactgaaacttgaagaagtcgagcgcgttgaggataagttgcgt
cgccgtgacttggtggtcgatgaagaaaccatttaccagttttatgcagagaaagtgcct
gaggaaattgccagccgccgtagttttgaggattggcgagcaacggtagaaacagaaaat
ccgcgttatctgtttgttgaagatgatgcgttgtggatgaatgatcgtcccaccacacaa
caatttcccgattatttgcataatgggcaattgcgtttggctgcaagttatcgttttgat
ccaagccatgatgaagatggagcaacagttaaaatcccagtgcaggctttaccacaggtc
gatgagaagcaatggtcatggggtattccaggttggcgtcaggacttgattgaagcttta
ctcaaggcgttgcctaaagataaacgccgtaatctggtgccgattcctgatactgcgaga
aagctgatgcaaggcgtggatgcaacgcatttacgtgaacatttgtttagttatctggct
tttgctttacgtggtgagcagatcacggaaaaagatttttcttttgaacgtattgaccag
tatctggtgccttttattaaagtgctggatgaaaaaggcaagtcgattgcgcaggggcgt
gatctggatgagttaaaagcacgttgtcgggttgaaacccatcgccctgtgaaacagcaa
aagggtgaattccagacttttccagaaagttttgtatttgaggcatcgcagaaagtcacg
ggtgttattgtcaagcaatatcaggcgctcgttcccacaaaagtctttgctgagttggat
gccaaagatgagtcgggtgtggtgattcaaacctttaatgatcaggatgaggccatcaag
caacatcgtgaaggaattattcgccttgtgcatatgcaattgggcgatttaatccgccag
ttgaaaaaacagatttccaaaccactggctttggcctattcacctttaggcgaacgggcg
agactggagcaaatgctggtttatgcaactttgcaggtttcgattcaagaattgcctaaa
aatgcggatgaattccaaaaattattaatggacaccaaaaagcatttcttgggtaatggc
cagcaggtcttaactgatatcacggaaatctttacccaatggcagaaaattcgccgtgag
ttactggtattggaccagaatatctttggtcgaagtgtggatgacattgaagaccaactt
gatttaatgtcattggcagactttgtttatagccgacctgccgagatttggcaggaatac
ccgcgttatttgaaagcgttgctattgcgtttagaccgattgcccaataatctacaacgt
gaccttgctgcaattgatgatgtcgatccatggatggacaaagtatttaaatttaaaaat
gatcctagaatcaaagaattgtatttgatgttggaagaactcagaatttccttgttttct
cagccgatgaaaacaaagctgcctatttcaccaactagattacaaaaactatgggatcgt
ttagcaatcggttaa
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