Acinetobacter corruptisaponis: QLH32_06775
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Entry
QLH32_06775 CDS
T10473
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
acot Acinetobacter corruptisaponis
Pathway
acot02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
acot00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QLH32_06775 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acot03021
]
QLH32_06775 (rpoD)
Transcription machinery [BR:
acot03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QLH32_06775 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
TMPIT
Motif
Other DBs
NCBI-ProteinID:
WHP07154
UniProt:
A0ABY8S9M7
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All DBs
Position
1411191..1413074
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AA seq
627 aa
AA seq
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MSDMNSPTSQVAALISRGKEQGYLTYAEVNDHLPDSITESEQIEDIIQMLQDVGIPVHER
APETDDTMFGESTEAADEVAEEEAAAVLASVESEPGRTTDPVRMYMREMGTVELLTREGE
ISIAKRIEEGIRDVLHSIAYWPNAVEVVLKEYNDFLTGERRLADILSGYLDPETDEDIPE
VLEEEAELEEDENATSTTKEVKLDDDDEEEESEGDDDSEGDSGPDPEVAKVRFSELETAW
NQTKSVIEKHGRNSDEAKAALESLAAVFMMFKFTPRLFDIISEMIRGTHDQIRANEREIM
RYAVRRGRMDRNQFRMTFPEQESNPAWLDEQIAKAPAEIKGHLEKVRPDVLAFQQKIADI
EKELDLNVKDIKDISKRMAVGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQE
GNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKINRVS
RQLLQEMGREPTPEELGERLEMDEVKVRKVLKIAKEPISMETPIGDDEDSHLGDFIEDSN
ITSPVDAATSEGLKEATREVLENLTEREAKVLKMRFGIDMPTDHTLEEVGKQFDVTRERI
RQIEAKALRKLRHPSRSEHLRSFLEND
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatatgaattcccctacttcgcaagtagcggctctgattagccgaggcaaagaa
caaggttacttaacttacgctgaggttaacgatcatctaccagactcaattacggaaagt
gagcagattgaagacatcatccagatgcttcaggacgttggtattcctgtgcatgaacgt
gcgcctgaaaccgatgacaccatgtttggtgaatctaccgaggctgccgatgaggttgcc
gaggaagaggctgctgccgtactggcatcggttgaaagtgaaccaggccgtaccacagac
cctgtacgcatgtacatgcgtgaaatgggcacggttgaacttcttacgcgtgaaggcgag
atcagcattgcaaaacgcatcgaggaaggtatccgtgacgttttacactcaatcgcttac
tggccaaatgcagtggaagtcgttttaaaagaatataatgattttttaactggcgagcgc
cgtcttgctgatattctttcaggctatttagaccctgaaaccgatgaggatattcctgaa
gttcttgaagaagaagcggagcttgaggaagatgaaaacgcgacttctaccaccaaggaa
gtcaagcttgatgatgatgacgaagaggaagagtctgagggcgatgatgattctgaaggt
gattcaggtccagaccctgaagtggccaaagttcgtttctcggaattagaaactgcctgg
aaccaaaccaaatctgtcattgaaaaacatggtcgcaatagtgacgaggcaaaagctgca
ctagagtctttggctgccgtgtttatgatgttcaaatttacacctcgcctgtttgacatc
atttcagaaatgattcgtggtacccatgaccaaatccgtgccaatgaacgtgaaatcatg
cgttatgcggtacgtcgtggccgtatggatcgcaaccagttccgtatgactttcccagaa
caggaatcaaacccagcctggctggatgagcagattgccaaggcacctgctgaaatcaag
ggccatctggaaaaagtacgcccagatgtgttggcattccagcaaaagattgctgacatt
gaaaaagaactggatttaaacgttaaggatatcaaggatatttctaaacgtatggctgtt
ggtgaggcgaaagcccgccgtgccaaaaaagagatggttgaggccaacctacgtttggta
atttcgattgcgaagaaatacaccaaccgtggcttgcagttccttgacctgattcaggaa
ggcaacatcggtttgatgaaagcggtggacaagtttgaataccgtcgtggttacaagttc
tcaacctatgcaacctggtggattcgtcaggcgattacccgttcgattgcggatcaggcg
cgtaccattcgtattccagtacacatgattgaaaccattaacaagatcaatcgtgtttcc
cgccagttgcttcaggaaatgggccgtgagccgacccctgaagagttgggcgaacgtctg
gaaatggatgaggttaaagtccgtaaggtgctaaaaatcgccaaagaaccgatttcgatg
gaaacaccgatcggtgatgatgaagattcacatcttggtgactttattgaggattccaac
atcacttctccagtagatgctgcgacctctgaaggcttaaaggaagcgacccgtgaagtg
cttgaaaacctgactgaacgtgaagcgaaagtgttgaaaatgcgttttggtattgatatg
ccaaccgaccataccttagaggaagtgggcaagcagtttgacgtgacgcgtgagcgtatt
cgtcagattgaggcgaaagcactgcgtaaactacgtcacccctctcgttcagagcaccta
cgttcattccttgaaaatgactag
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