Acinetobacter corruptisaponis: QLH32_09395
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Entry
QLH32_09395 CDS
T10473
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
acot Acinetobacter corruptisaponis
Pathway
acot03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acot00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QLH32_09395 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acot03021
]
QLH32_09395 (rpoC)
03400 DNA repair and recombination proteins [BR:
acot03400
]
QLH32_09395 (rpoC)
Enzymes [BR:
acot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QLH32_09395 (rpoC)
Transcription machinery [BR:
acot03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QLH32_09395 (rpoC)
DNA repair and recombination proteins [BR:
acot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QLH32_09395 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Peptidase_M23
Apocytochr_F_C
Mis14
Motif
Other DBs
NCBI-ProteinID:
WHP04304
UniProt:
A0ABY8S294
LinkDB
All DBs
Position
complement(1980514..1984707)
Genome browser
AA seq
1397 aa
AA seq
DB search
MKDLLDIMRKKTDSDGHTPVEFDRIRIGLASPEMIKSWSHGEVKKPETINYRTFKPERDG
LFCAKIFGPVKDYECLCGKYKRMKYKGVICEKCGVEVTTAKVRRERMGHIELASPVAHIW
FLKSLPSRIGLLLDMTLRDIERVLYFESYVVTDPGMTPFEKYQLLTDEEYYNALEEHGDE
FTAKMGAEAVQDLLKDIDLEAEIARLREEIPQTTSETKLKKASKRLKLMEAFKESNNKPE
WMVMNVLPVLPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNE
KRMLQESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVI
TVGPTLRLHQCGLPKKMALELFKPFIFAKLQASGQATTIKAAKKMVERETAEVWDVLASV
IRQHPVMLNRAPTLHRLGLQAFEPILIEGKAIRLHPLVCAAFNADFDGDQMAVHVPLTLE
AQLEARALMMSTNNILSPANGEPIIVPSQDVVLGLYYITRDAVNAKGEGMVFADTHEVNR
ALATGKVNIHARVKVRVHQTVIDENGHREKQTIIVDTTPGRCLLWEVVPQGLSFDMINLE
MTKKNISKLINSCYRKLGLKDTVIFADQLMYLGFRQATRSGVSVGMEDMLIPPTKQVIID
KAETEVREIEQQFEQGFVTAGERYNKVVDIWARTNDQVAKAMMDNLSYTLVKNKQGEDEK
QKSFNSIYMMSDSGARGSAAQIRQLAGMRGLMAKPDGSIIETPIKANFREGLTVLQYFIS
THGARKGLADTALKTANSGYLTRRLVDVAQDLVITESDCGTAGGLVMTPFIQGGDVIEPL
RDRVLGRVTAEDVRRASDDEVVLPRGTLIDEKIAAQLEEAGVDEVKVRSVIACESTFGVC
AKCYGRDLARGHLVNPGESVGVMAAQSIGEPGTQLTMRTFHVGGAASRTSAANSVQVRNK
GTVRFHNVKTVQHAKGHLVSVSRSGEIGIADDLGRERERYKLPYGASILLKDGEAVEAGG
IVATWDPHTHPLVTEVAGKARFSQIADGVTATSKTDDATGMTTVEILPVTARPASGKDLR
PAIVLDTTDGGEQFYFLPQNTIVTVRDGETIGVGDVIGRVPQESSRTRDITGGLPRVADL
FEARKPKEHAILAEVSGIVSFGKETKGKNRLVITPDDGSEIYEELIPKWRQINVFEGEHV
NRGETISDGPQNPHDILRLKGEVALTNYIVNEVQDVYRLQGVKINDKHIEVVVRQMLRKV
DITDGGDTSFIKGEQVDYIRVVQENQAVLAQNKFPAKFERQLMGITKASLSTDSFISAAS
FQETTRVLTEAAVTGKEDDLRGLKENVVVGRLIPAGTGLAYHLERRRQEAEAAEFELHND
FSEVDQAFSQALNSDQF
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagacttgctcgatatcatgcgtaagaaaacggattcagatggtcatacaccagtt
gaatttgaccgtatccgtattggtcttgcgtcaccagagatgattaagtcatggtctcac
ggtgaagttaaaaagcctgaaaccattaactaccgtacttttaaacctgaacgtgacggt
ttgttctgtgccaagatctttggtccagtaaaagattatgaatgcttgtgtggtaaatac
aagcgtatgaaatacaaaggtgtcatttgtgaaaaatgtggcgttgaggtaacaaccgcc
aaagttcgtcgtgagcgtatgggtcacatcgaacttgcatctccagttgcgcatatctgg
ttcctgaaatcattaccgagccgtattggcttgcttcttgatatgacattacgtgatatc
gagcgcgtattgtatttcgaatcttatgtagtgactgatcctggtatgactccgtttgaa
aagtatcaacttttaacggatgaagaatactacaatgcacttgaagaacatggtgatgaa
ttcactgcgaaaatgggtgcggaagcagttcaggatttgttaaaagacatcgaccttgaa
gcggaaattgcacgtttacgtgaagaaattcctcaaacaacctctgagacgaaacttaaa
aaagcgtctaagcgtttgaaattgatggaagctttcaaggaatcgaacaacaagcctgaa
tggatggtgatgaatgtactgccagtacttccaccagacttacgtccgttggtaccactt
gaaggtggtcgtttcgcgacttcagacctgaacgatctataccgtcgtgtgatcaaccgt
aacaaccgtttgaagcgtcttcttgaccttgcagcgccagacattatcgtacgtaacgaa
aaacgtatgttgcaggagtctgtagatgcgttgctggataatggtcgtcgtggccgtgcg
attacaggttcaaacaaacgtccattgaaatctttggcagacatgatcaagggtaaacaa
ggtcgtttccgtcagaacttacttggtaagcgtgttgactattctggtcgttcggtgatt
accgttggccctactttacgtctgcaccaatgtggtcttccgaagaaaatggcacttgaa
ctgttcaagccattcattttcgcgaaactacaagcctctggtcaggcaacaaccattaaa
gctgcgaagaaaatggttgagcgtgagacagcagaagtttgggacgttcttgcttctgtg
attcgtcaacatccagtcatgttgaaccgtgcgccaacacttcaccgtctaggtcttcag
gcatttgaaccgatcctgatcgaaggtaaggcaatccgtcttcacccactcgtttgtgcc
gcgttcaacgccgacttcgatggtgaccaaatggcggtacacgttccattgacattggaa
gcacagttagaagcacgtgcactgatgatgtcaaccaacaacatcctgtcacctgcaaac
ggtgagccgatcatcgttccttctcaggacgtggtcctgggtctttactacatcacccgt
gatgcggtaaatgccaagggtgagggcatggtgtttgcggatacgcatgaagtgaaccgt
gccttggcgacaggtaaagtgaatattcatgcacgtgtcaaagtacgtgtacatcaaacc
gtgattgatgaaaatggtcatcgtgaaaagcagaccattattgttgatacaaccccaggc
cgctgcctgttgtgggaagtggttccacaaggcttaagctttgacatgatcaaccttgag
atgaccaagaaaaacatctcgaagttaatcaactcttgctatcgtaagcttggtttgaaa
gacacagttatcttcgctgaccagttgatgtatttgggcttccgtcaagcgacgcgttca
ggtgtgtccgtcggtatggaagacatgctgattccgccaaccaaacaggtcattattgac
aaggcagaaactgaagttcgtgaaattgaacaacagtttgagcaaggtttcgtaactgcg
ggtgagcgttataacaaggttgtcgatatctgggcacgtactaacgaccaggttgcgaaa
gcgatgatggacaacttgtcttatacccttgtgaaaaacaagcagggtgaagatgagaaa
cagaaatcattcaactcaatttatatgatgtctgactcgggtgcccgtggtagtgcggcg
cagatccgtcagcttgctggtatgcgtggcttgatggcgaaaccagatggctcgatcatt
gagacaccaattaaggcaaacttccgtgaaggtttgactgtacttcagtacttcatctcg
acacacggtgcgcgtaaaggtttggccgataccgcattgaaaactgcgaactctggttac
ctgacccgtcgtcttgtagacgtggcacaagatttagttattactgaatctgactgtggt
acagctggcggcctggtgatgacaccattcattcagggtggtgacgtgattgaaccatta
cgcgatcgtgtattggggcgtgtaactgcggaagacgtacgtcgtgcatctgatgatgaa
gtggttcttccacgtggtaccttaattgacgagaaaatcgctgcccagcttgaagaagcg
ggtgtcgatgaagttaaagttcgttcagttattgcgtgtgaatctacatttggcgtatgt
gcgaaatgttatggccgtgaccttgcacgtggtcacttggtgaacccaggtgaatctgtt
ggtgtaatggctgcacagtcaattggtgagccaggtacacagttaaccatgcgtacgttc
cacgtgggtggtgctgcgagccgaacctctgctgcaaacagtgttcaagtccgtaacaaa
ggtactgtacgtttccacaacgtgaaaactgtacaacatgccaaaggtcacttggtatct
gtttcacgttcaggtgaaattggtattgcggatgacttgggacgtgagcgcgagcgttat
aaacttccttacggtgcaagcatcttgttgaaagatggtgaagctgtggaagctggtggt
atcgtggcgacttgggatccacatacacatccactcgttaccgaagttgcaggtaaggca
cgtttcagccagatcgctgatggtgtaactgcaacctctaagactgatgatgcaacaggt
atgaccactgttgaaatcttgcctgtaacagcacgtcctgcttctggtaaagatttacgt
cctgcaatcgtgttggatacaaccgatggcggcgaacagttctacttcctgccacaaaac
acaattgtaactgtccgtgatggcgaaacaattggtgtgggtgacgttattggtcgtgta
ccacaggaatcttcacgtacccgtgacattacgggtggtctgccacgcgtagctgacttg
ttcgaagcacgtaagccgaaagagcatgcgatcttggcagaagtgtctggtatcgtgagc
tttggtaaagagaccaaaggtaagaaccgtttagtgatcacaccagatgatggttcggag
atctacgaagaattgattccaaaatggcgtcaaatcaacgtgttcgaaggtgagcatgtc
aaccgtggtgagactatttctgatggtccacaaaacccacatgacatcttacgcttgaaa
ggcgaagtggcattgaccaactacatcgtgaacgaagttcaggacgtttaccgtctgcaa
ggtgtaaaaatcaacgataagcacattgaagttgttgtacgtcaaatgttgcgtaaagtt
gatatcactgatggtggtgacacaagcttcatcaagggcgagcaagtggattacatccgc
gttgttcaggagaaccaggctgtcttggctcagaacaagttcccagcgaagtttgaacgt
caattgatgggtatcaccaaagcgtcgctttctactgactcattcatctctgctgcatcg
ttccaggaaacaacacgcgtgttaactgaagctgctgtaacaggtaaagaagatgactta
cgtggcttgaaagaaaacgttgttgtgggtcgcttgatcccagcaggtacaggtcttgcg
tatcacctagagcgtcgtcgtcaggaagcggaagctgctgaatttgaacttcacaatgat
ttcagtgaagttgatcaggcatttagtcaagcgttgaactcagaccagttctaa
DBGET
integrated database retrieval system
