Alistipes communis: A5CBH24_02020
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Entry
A5CBH24_02020 CDS
T06592
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
acou
Alistipes communis
Pathway
acou03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acou00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A5CBH24_02020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acou03019
]
A5CBH24_02020
03400 DNA repair and recombination proteins [BR:
acou03400
]
A5CBH24_02020
Enzymes [BR:
acou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A5CBH24_02020
Messenger RNA biogenesis [BR:
acou03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A5CBH24_02020
DNA repair and recombination proteins [BR:
acou03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A5CBH24_02020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Cas3-like_C_2
DprA_WH
HTH_41
DUF5805
Motif
Other DBs
NCBI-ProteinID:
BBL02889
UniProt:
A0A3D3YLE9
LinkDB
All DBs
Position
239447..241366
Genome browser
AA seq
639 aa
AA seq
DB search
MQPLDDIHAELLGTLKRYWGYDSFRPVQEEIIRSVCQGRDTLALMPTGGGKSLTYQVPTM
LREGLCIVVTPLIALMKDQVDRLRRLGINAAAIHSGLSMRQIDIVLDNCVYGDVKFLYVA
PERLVTEAFRLRVERMRVSLLAVDEAHCISQWGYDFRPSYLRIAELRERLPEVPVLALTA
SATPAVARDIMRQLRFAEPHVLRSSFARPNLSYAVRHDEDKNEQLLRVVRNVAGSGIVYV
RTRDGCEQLTEFLRDAGVAATCYHGGLANAERSIRQEEWLAGRTRIMVATNAFGMGIDKA
DVRFVVHYSMPDSLESYYQEAGRAGRDGKRAYAVLLVAPDDAERVQRRFDLQFPPLDEIR
DIYEKVCSYLQIGIGDGEQASFVFNIHDFCAKFRLFGGKVASALKLLQQNGYLTLTDEMR
NPARILFCISRDDLYKLRVVRNDLDHFIRTVLRLYDGVFTDFRPIDEQEIAAASGYKVEH
VKELFKRLWQMRVIRYIPANQAPMLFFDCERLPAADLYIAPETYRRRQELAEERFSHMIA
YAANETECRSTVLERYFGAADPAPCGVCDICLAARKRAKSAEAPLDEEILRQLDAEPLAV
KELAARFRCDAERVLEAVERLQHAGKISTAESGKLAINR
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccgctggacgacatacacgccgaactgctcggcacgctcaaacgctactggggc
tacgacagcttccgtcccgtgcaggaggagatcatccgctccgtctgccaggggcgcgac
acgctggcgctgatgcccaccggcggcggcaagtcgctcacctatcaggtgccgacaatg
ctgcgcgaaggtttgtgcatcgtcgtaacgccgctgatcgccctgatgaaggaccaggtc
gaccgcctcaggcggctcggcatcaacgcggcggcgatccattcgggactttcgatgcgg
caaatcgacatcgtgctcgacaactgcgtctacggcgatgtcaaattcctctacgtggct
cccgaacggctcgtgaccgaggcgttccgtctgcgcgtggagcggatgcgggtctcgctg
ctggccgtcgacgaggcgcactgcatctcgcagtggggctacgacttccgcccctcctac
ctgcgcatcgccgaactgcgcgaacggctgcccgaagtgccggtgctggcgctcacggca
tcggccacacccgctgtcgcccgcgacatcatgcggcagctgcgcttcgccgaaccgcac
gtcctgcgcagctcgttcgcacggcccaacctctcctacgccgtgcggcacgacgaggac
aaaaacgagcaactgcttcgcgtggtgcgcaacgtggccggcagcggtatcgtctacgtg
cgcacgcgcgacggctgcgaacagctcaccgaattcctgcgcgacgcaggcgtcgccgcg
acctgctaccacggcggcctggccaacgccgaacgctcgatccggcaggaggagtggctc
gcgggccgcacgcgcatcatggtggccaccaacgccttcggcatgggaatcgacaaggcc
gacgtgcgtttcgtcgtccactactccatgcccgactcgctcgaaagctactatcaggaa
gcgggccgtgcgggacgcgacggaaagcgcgcctatgccgtgctgctcgtcgccccggac
gacgccgagcgcgtgcagcgccgcttcgacctgcaattcccgccgctcgacgagatccgc
gacatctacgaaaaggtctgctcctacctgcaaatcggcatcggcgacggcgagcaggcg
tcgttcgtcttcaacatccacgacttctgcgcgaagttccgcctcttcggcggcaaggtc
gccagcgcgctgaaactgttgcagcagaacggttatctgacgctcaccgacgaaatgcgc
aaccccgcgcgcattctcttctgcatcagccgcgacgacctctacaaactgcgcgtggta
cgcaatgacctcgaccacttcatccgtaccgtgctgcggctctacgacggcgttttcacc
gatttccgccccatcgacgagcaggagatcgccgcggcgagcggctacaaggtcgagcat
gtcaaggagctgttcaagcggctgtggcagatgcgcgtgatccgctacattccggccaat
caggcgccgatgctcttcttcgattgcgaacggctgccagcggccgacctctacatcgcc
cccgagacctaccgccgccgtcaggagctggccgaagagcgcttctcgcacatgatcgcc
tacgccgccaacgaaaccgagtgccgcagcacagtgctggaacgctatttcggtgcggcc
gaccccgcgccgtgcggtgtctgcgacatctgtctggcggcgcgcaaacgcgcgaaatcg
gccgaagctccgctcgacgaggagatcctgcgacagctcgacgccgaaccgctcgcggtc
aaggagctggcagcgcgcttccgctgcgacgccgaacgggtgttggaggccgtcgaacga
ttgcagcacgcaggtaaaatttcgacggcggagagcggaaaactcgcaattaatcgataa
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