Alistipes communis: A5CBH24_04220
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Entry
A5CBH24_04220 CDS
T06592
Name
(GenBank) DNA-directed RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
acou
Alistipes communis
Pathway
acou02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
acou00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
A5CBH24_04220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acou03021
]
A5CBH24_04220
Transcription machinery [BR:
acou03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A5CBH24_04220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_40
HTH_24
HTH_28
HTH_Tnp_ISL3
UPF0122
HTH_50
HTH_AsnC-type
HTH_10
HTH_5
HTH_23
HTH_38
HTH_11
Fib_alpha
Motif
Other DBs
NCBI-ProteinID:
BBL03109
UniProt:
A0A4Y1WS81
LinkDB
All DBs
Position
487693..488244
Genome browser
AA seq
183 aa
AA seq
DB search
MLDRFRQGDAKAFASLYRTHWNQVFRFSRLYLKNDEDAEDVVQEVFIRLWQIHERIHPDG
NFSGLLFIITRNLIFNRFHKQINPLSFKVSVLAALESSDDIESEVSARDLAEYIDRLIDL
MPARQRQVFNMSRREHKSYREIAEELNLSQKTVEAHMHEALRFLRDNLALLLWLALFNDG
PVC
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaccgcttccggcaaggcgatgccaaagcattcgccagtctctatcgcacccac
tggaatcaggttttccgtttcagccgcctctacctgaaaaacgacgaggatgcggaggac
gtcgtacaggaggtgttcatccgtttgtggcagattcacgaacgcatccaccccgacggc
aatttttcgggactgcttttcatcatcacgcgcaatctgatcttcaaccgctttcataaa
cagatcaacccgttgagtttcaaggtatccgtcctcgcagccctcgaatcatccgacgac
atcgaatccgaagtgagcgcccgcgaccttgcggaatacatcgaccgactgatcgacctg
atgcccgcccgtcagcggcaagtcttcaacatgagccgccgcgagcacaagagctaccgg
gagatcgcagaagaactgaacctttcgcaaaaaaccgtcgaagcgcacatgcacgaagcg
ctgcgtttcctgcgcgacaacctcgcgctgctgctctggctcgcgcttttcaacgacgga
ccggtctgctaa
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integrated database retrieval system
