Alistipes communis: A5CBH24_12620
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Entry
A5CBH24_12620 CDS
T06592
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
acou
Alistipes communis
Brite
KEGG Orthology (KO) [BR:
acou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acou03032
]
A5CBH24_12620 (topA)
03400 DNA repair and recombination proteins [BR:
acou03400
]
A5CBH24_12620 (topA)
Enzymes [BR:
acou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
A5CBH24_12620 (topA)
DNA replication proteins [BR:
acou03032
]
Prokaryotic type
DNA Topoisomerases
A5CBH24_12620 (topA)
DNA repair and recombination proteins [BR:
acou03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A5CBH24_12620 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
MarR_2
Motif
Other DBs
NCBI-ProteinID:
BBL03949
UniProt:
A0A4Y1WUL8
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All DBs
Position
1554177..1556474
Genome browser
AA seq
765 aa
AA seq
DB search
MQENLVIVESPAKAKTIEKFLGKDFMVKSSFGHIRDLSKKDLGINLADGFAPVYEIPKDK
RKVVDELTRAAKDRTVWLASDEDREGEAIAWHLTEVLGLPVEGTKRIVFHEITKRAILEA
IENPRTVDMNLVNAQQARRVLDRLVGFELSPVLWKKVRPSLSAGRVQSVAVRLLVERERE
IIAFRSTPYFRVVAQFHAAGDKDRTLFKAELPTRFESREEAEAFLRSCVGATFTVAKVEE
KPVQRYPAPPFTTSTLQQEAGRKLGMSVSQTMSVAQHLYEQGLITYMRTDSVNLSTLALA
QCKEQITNLYGEKYSSYHNYKTKTKGAQEAHEAIRPSYIERQAIEGTPAEKRLYDLIWKR
TVASQMVSAELDRTTITIAIDGRREQFVATGEVVRFDGFLRLYSESTDEEPAEDSEGLLP
KLSAGDEVLYQTITATQRFTMPPARYNEASLVKRLEELGIGRPSTYAPTITTIINRGYVV
KQSKEGQKRTYEQLTLAGGSVSAKTLSESFGKEKNRLQPTDIGMLVNDYLEQQFAPIIDY
NFTANVEKEFDRVAEGDITWDKMIAAFYGPFHRMVDTAIETQSDKHGQARVLGADPKTGR
TVKARIGRYGPMVEIEGEGEEKPRFASLKKGQLIESITLDEALALFALPRTLGEWEGEPM
VVGLGRFGAYVRWGKSTFASLAKGDDPYTLTLERGVELIKAHQAQRTAANTPIRSFAEDP
DMLVKNGRYGAYIAYKGKNYRIPKGTKPEELTLDECLKIVAASKK
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaaatttagttatcgtcgagtcgccggccaaggccaagacgatcgagaagttc
ttgggtaaggatttcatggtcaagtcgagcttcggccatattcgcgacctctcgaaaaag
gatctgggaatcaatctcgccgacgggttcgcgccggtttacgagatcccgaaggataaa
cgcaaggtcgtggacgaactcacgcgcgccgcgaaggaccggaccgtgtggctcgcctcc
gatgaagaccgcgaaggagaggccatcgcatggcacctgaccgaagtgttgggtctcccg
gtcgaggggacgaagcggatcgtcttccacgaaattacgaagcgggccattttggaggct
atcgagaacccgcggacggtcgatatgaatctggtcaacgcccagcaggcgcgccgcgtg
ctggatcgtctggtcggtttcgagctgtcgcccgtgctgtggaagaaggtgcggccgtcg
ctgtcggcgggtcgcgtgcagagtgtcgccgtgcggctgctcgtcgagcgcgaacgcgag
atcatcgccttccggtcgaccccctatttccgcgtcgtggcgcagttccatgccgccggg
gacaaggatcggacgctcttcaaggccgagctgccgacgcgcttcgagtcgcgcgaggag
gccgaggcgttcctccgcagctgcgtcggcgcgaccttcacggtggccaaggtcgaagag
aagcccgtgcagcgctatcccgcgccgcccttcacgacctccacgttgcagcaggaggcg
gggcgcaagctggggatgtcggtttcgcagaccatgtccgtcgcgcagcacctctacgag
cagggtctcatcacctacatgcgtaccgactcggtgaacctctcgacgctggcgctggcg
cagtgcaaggagcagatcacgaatctctacggcgagaagtattcgtcgtaccataactac
aagaccaagaccaaaggggctcaggaggcgcacgaggcgatccgcccgtcgtatatcgag
cggcaggcgatcgagggtacgccggccgaaaagcggctctacgacctgatctggaagcgc
acggtcgcttcgcagatggtttcggccgagctggaccgcacgacgatcacgatcgcgatc
gacggccgccgcgaacagttcgtcgccacgggcgaagtggtgcgtttcgacggtttcctg
cggctctattcggagtcgaccgacgaggagccggccgaggacagcgaagggctgctgccc
aaactctctgcgggcgacgaggtgctctatcagaccattacggccacgcagcgtttcacg
atgccgccggcgcgctacaacgaggcgtcgctggtcaagcggctcgaagagctgggcatc
ggccgcccttcgacctatgcgccgaccatcacgacgatcatcaaccgcggttatgtggtc
aagcagagcaaggaggggcagaagcgcacctacgaacaactgacgctcgcgggcggcagc
gtgtcggccaagacgctcagcgagagcttcggcaaggagaagaaccggctgcaacccacc
gatatcggtatgctggtgaacgactacctcgaacagcagttcgcaccgatcatcgactat
aatttcacggccaacgtcgagaaggagttcgaccgcgtggccgagggcgacatcacgtgg
gacaagatgatcgccgctttctacgggccgttccaccgcatggtcgatacggcgatcgag
acgcagtccgacaaacacgggcaggcgcgcgtgctgggtgccgatcccaagacgggacgc
acggtcaaggcccgcatcggccgctacgggccgatggtcgagatcgagggcgaaggcgag
gagaaaccccgtttcgcctcgcttaaaaaagggcagctcatcgagtcgatcacgctcgac
gaggcgctggcgctcttcgccctgccccgcacgctgggcgaatgggagggcgagccgatg
gtcgtcgggctggggcgcttcggcgcttacgtgcgctggggcaagtcgaccttcgcctcg
ctggccaagggcgacgatccctacacgctgacgctcgaacgcggcgtggaacttatcaag
gcgcatcaggcgcagcggacggcggccaacacgccgattcggagcttcgccgaagatccc
gacatgctggtcaagaacggccgctacggtgcctacatcgcctacaagggaaagaactac
cgcatcccgaaggggacgaagcccgaagaactgacgctcgacgagtgcctgaaaatcgtc
gccgcgtcgaagaaatga
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