Anopheles coluzzii: 120948090
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Entry
120948090 CDS
T07312
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13191
RNA-binding protein 16
Organism
acoz
Anopheles coluzzii
Brite
KEGG Orthology (KO) [BR:
acoz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acoz03021
]
120948090
03041 Spliceosome [BR:
acoz03041
]
120948090
Transcription machinery [BR:
acoz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
120948090
Spliceosome [BR:
acoz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120948090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
120948090
NCBI-ProteinID:
XP_040220005
LinkDB
All DBs
Position
2:36915073..36924962
Genome browser
AA seq
1444 aa
AA seq
DB search
METVRVFNQELSGLYESKPPISKAKMASITRSAMKAIKFYKHVVQSVEKFIQKCKCEYKI
PGLYVIDSIVRQSRHQFGPEKDVFAPRFARNMESTFAHLFRCPPEDKSKIIRVLNLWQKN
MVFLPEVIQPLFDLANPDHPIHQQYNAQVLQEQAAGANGMNPGGLPHDSPVGGSMGGGMD
DHGGQLQMGETKQLDPSTIRQLQQFQQILMRQTSGDQANAVSKDQVKFNKKLLDFDYGSD
DDDDKNSPSVPLPANAGMPDLSQVPAGNIAQILSDPNVLKQLQNLQKLKQQEEKQTKLSE
MMLKEEKFEKHLASVLMKLPFANECDLSRQPPIDVNAGHSKDVDTDNDVSITGVEILGDP
IPVGGSRGGGIGLGGSGTASGSGNNDRYKSSSSSSRRKSRSRSPRDRRGGGTSGRRGRSH
SRSRSASPRSSRRRSSRDRGGTSAKDREREKEHERERKRKGLPEMKKEHLSVCSTTLWVG
HLSKLVQQEELSDTFGKYGDIVSIDMIPPRGCAFIVMNRRQDAFKCMQSLKNHKMHGRTI
TISWAAGKGVKSKEWKDYWDLDLGVSYIPWSKLSPSTDLETLEDGGMFDEDTIPQWMKEK
STAGGTAAAGPSAAAAAAAAAAAMGLGLAPGMGLKKLDGSDLSSAAAAAAAAAAAGMLNP
SLFPLSAVDTSQPPPTAMMGMGMPPFPMGPVARLPIPMGIPMGPNMVPGLGINVPPPGMM
MPGNPPPLPMGGFGVLPPPPPSSSSSAAPGMMGNGGGAANLMSSSSNMSKSSADDMDIEM
EDEHTSNPAPMVGGGQGAGAFFNQPPPPLMPPTANLGPQPGPPGNVAGFFGGSAAGPNMP
GSGPNMPDNGGMLDGGSDDADGEANMAGGRGARDGFLHGSDEARDNLRGRGGSDRSRDRD
QRGGGFERGAGGDGGGRRDRGDRGSRWGGGGNDRGGGNNFRGTGGGNNQQDDRPLSERLR
ELAGVLEFNNQQQRAGGVGVGGGRLFARVGNDGDDFGNRDADFTRRGGNFQQNRFNNNAA
GGNGDLAGRNQGRNGPFGNQQQGGRGGMFGNRLGRNNNQQQQRGGQFFNEDRQQQQGGFF
DRNEDSNGYDSGGNNNGPNNRRNWNDRAGGRGNNGGNNRDEGNRGRGRQQNWRSGDESAG
EGGGSGGGQRFNNARGGGNNNRGNGGGNRPGAAARWDDDNESWDDANNRPTTGRQTQFGA
SNRQRRNSGGNDEQENDQQEQRREGQSENDDMAICDDQSRHSENDTARDMHNVPLNRHED
DGDAMGDRRFQRNHHRRNDDADDERPQPILYSPEPEEEPDEMGGNDQYAREDNTNYHQGD
DNGGQDHPNRGVEATDEVMNQCQSQEDSSQFGGATADDRFEEQREQEQAAPSSAMEQGVR
DEDNDYSHQEKQQDLPEDDRNETAAASSSSPTMPTPCQEQNNEPSVQSNDTAEEESASGE
PAAC
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atggagacggtccgggtcttcaaccaggagctgtccgggctctatgagtcgaagccgccc
atttcgaaggccaaaatggcctcgattacccgcagtgcaatgaaggcgatcaagttctac
aagcatgtggtgcagagtgtggaaaagtttatccagaagtgcaagtgcgaatacaagatt
cccggcctgtacgtgatcgattcgattgtgcgccaatcgcgtcatcagttcggtccggag
aaggatgtgttcgcaccgcggtttgcacgcaacatggagtccacgtttgcgcatctgttt
cgctgcccgcccgaagataagagcaaaattatccgggtgctaaatctctggcagaagaac
atggtctttttgcccgaagtcatccaaccgctgtttgacctcgcgaatccggaccacccg
atccaccagcagtacaatgcacaggtgctgcaggagcaggcggcgggggcgaacgggatg
aacccgggcgggctgccacacgactcgccggtaggaggttcgatgggtggtggcatggat
gaccacggcggtcagctgcagatgggcgaaacgaaacaactcgacccgtccaccatccgg
cagctgcagcaatttcagcaaattctgatgcgccaaacgtccggcgatcaagccaacgca
gtgtcgaaggatcaggtgaagtttaacaagaagctgctggacttcgattacggcagcgat
gatgacgacgataagaactcgccatcggtaccgttaccggcaaacgccggtatgcccgat
ctgtcgcaggtgcccgccggcaacattgcgcagattttgtccgacccgaacgtgctgaaa
cagctgcagaacctgcagaagctgaagcagcaggaggagaagcaaacgaagctgtcggaa
atgatgctgaaggaggagaagttcgagaagcatcttgccagcgtcctgatgaagttaccc
ttcgccaacgagtgcgatcttagtcggcagccaccgattgatgtaaatgccggtcactcg
aaggatgttgatactgataacgacgtctcaataacaggagttgagatactgggagatccc
ataccggttggtggcagccgcggcggaggcatcggactgggaggcagtggaaccgctagt
ggaagtggcaacaacgatcgctacaaatcatcgtcgtcctcgtcgcggcgtaaaagcaga
tcccgatcaccgcgcgatcgtcggggcggtggaaccagcggacgtcgcggtcgttcgcat
tcccgttcgcggtcagcttcgccaagatcgtcccgcaggcgttcgtcccgcgatcgcggt
ggcacgtcggccaaggatcgggaacgggagaaggaacatgagcgggagcgcaaacggaag
ggtttgccggagatgaaaaaagagcacctgagtgtttgtagcacgacactgtgggtcggg
catctctccaagctggttcagcaggaggagctatcggacacgttcggcaagtatggtgac
atcgtgagcatcgatatgataccgcccaggggctgtgcgtttatcgtcatgaaccggagg
caggatgcgttcaagtgcatgcaaagcctcaagaaccataagatgcacgggcgcaccatc
acgatctcttgggccgccggcaaaggcgtcaagagcaaggaatggaaggactactgggat
ctggatctgggcgtaagctacattccctggtccaagttaagccccagcacggatctggaa
acgctggaagatggtggcatgttcgacgaggatacaattccccagtggatgaaggagaaa
tcgaccgcaggcggaacggctgcagccggaccatcggcagcagcagcagcagcagctgcc
gccgcagccatgggccttggtttggcaccgggcatgggcttaaagaagctggacggttcg
gacctgtcgtcggcagcggcggcagctgcagctgctgcggccgccggaatgctaaatccg
tctctgttcccactgagtgcggtcgacacaagtcagccaccgccaaccgctatgatggga
atgggaatgccacccttcccgatgggcccagtggcaagactgccaattccgatgggtatc
ccgatgggaccgaacatggtgcctggcttgggaatcaatgtgccccctccagggatgatg
atgccaggcaatcccccgccgctgccgatgggcggtttcggtgtgctgcctccgccgccg
ccttcgtccagttcatctgctgctccgggtatgatgggtaatggtggtggtgcggcaaat
ctgatgagttctagctccaatatgagtaaatcgtccgcagatgatatggacatcgagatg
gaggacgaacacacttccaaccctgccccgatggtcggcggtggccagggtgccggtgca
ttctttaatcagccaccgccaccgttgatgcctccgaccgcaaaccttggcccccaaccg
ggaccaccgggtaatgttgctggtttctttggcggttcggcggcagggccaaacatgccg
ggttccggaccaaatatgcccgacaacgggggcatgctggatggaggcagcgatgacgcc
gacggcgaagcgaacatggcaggtggtcgcggtgcgagagatggctttctgcacggcagc
gacgaggcgcgagataatcttcggggtcggggcggtagcgaccgtagcagggaccgtgat
cagcgaggcggtggcttcgaaagaggagctggcggtgatggtggtggtcgacgcgatcga
ggtgatcggggcagccggtggggtggcggtggaaatgatcgcggaggaggcaataatttc
cgcggcaccggtggcggcaacaaccagcaggacgaccgaccgctgtcggagcggctgcgg
gagctggccggcgtgttggaattcaataatcaacagcaacgcgccgggggcgttggtgtc
ggcggcggtcgtctcttcgcgcgagtgggcaatgatggagacgattttggcaaccgggac
gcagactttacgcgacgcggcggaaacttccagcagaataggttcaacaacaatgcggct
ggtggaaacggcgacctcgccgggcgcaaccagggtcgcaatggaccgttcggcaaccag
cagcagggtggacgcggcggaatgtttggcaaccggctcggaagaaataacaaccagcag
caacagcgtggtggtcagtttttcaatgaagaccggcaacagcagcagggtggcttcttc
gatcgcaacgaagatagcaatggttacgattctggtggtaacaacaatggccccaacaat
cgtcgcaactggaacgatcgcgcgggcggtcggggcaacaacggaggcaacaaccgcgac
gaaggtaaccgtggacggggaaggcaacagaattggcgcagtggcgatgaaagtgcgggt
gaaggtggtggctctggaggaggacagcggttcaataatgcccgcggaggaggcaacaat
aatcgtggcaatggtggaggcaatcgccccggtgctgcggcccgatgggacgatgacaac
gagtcgtgggacgatgctaacaataggccgaccaccggacggcaaacacagttcggagca
agcaaccgccagcgtagaaactcgggcggaaatgacgagcaagagaacgatcagcaggag
caacgccgagaaggacaatcggaaaatgacgacatggcgatttgcgatgaccagtcccga
cacagtgaaaacgataccgccagagatatgcacaatgtcccgctgaacagacacgaagat
gacggcgatgccatgggcgatcgacgattccagcgcaatcatcatcgccgaaacgatgat
gcagatgacgaaaggccacagcccatcctgtactccccagaaccggaagaggagcccgac
gaaatgggtggcaatgaccagtatgctcgggaggataatacaaactaccaccaaggggac
gataatggtggccaagatcatcctaatcgtggagtggaagcaaccgatgaggtgatgaat
caatgtcagtcacaggaagatagctcgcaattcggcggagcaacggcggacgatcggttc
gaagagcagcgagaacaggagcaagcagctccttcgtctgccatggaacaaggtgtacgg
gacgaggataatgactactcccatcaggaaaagcaacaggatctgcccgaggacgatcgc
aatgagactgcagcagcatcttcatcttccccgacgatgcccaccccctgccaggaacaa
aacaatgagcctagtgttcaatcgaatgacaccgccgaagaggaatcagcttctggcgaa
cctgctgcatgttga
DBGET
integrated database retrieval system
