Anopheles coluzzii: 120948473
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Entry
120948473 CDS
T07312
Name
(RefSeq) splicing factor 3B subunit 3 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
acoz
Anopheles coluzzii
Pathway
acoz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acoz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120948473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acoz03021
]
120948473
03041 Spliceosome [BR:
acoz03041
]
120948473
03036 Chromosome and associated proteins [BR:
acoz03036
]
120948473
Transcription machinery [BR:
acoz03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
120948473
Spliceosome [BR:
acoz03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
120948473
Complex B
120948473
Complex C
U2 SnRNP specific factors
120948473
Chromosome and associated proteins [BR:
acoz03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
120948473
TFTC complex
120948473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
120948473
NCBI-ProteinID:
XP_040220773
UniProt:
A0A9I3AMU9
LinkDB
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Position
2:82957795..82966574
Genome browser
AA seq
1217 aa
AA seq
DB search
MYLYNFILQRATGITHAVHGSFAGTKLQEILLAKGKGLELVRPDPNTGKVHTLLQTEVFG
VVRSLMSFRLTGGSKDYAVIGSDSGRIVILEYNPAKNQLEKVHQETFGKSGCRRIVPGQY
LAIDPKGRAVMIGAVEKQKLVYILNRDSEARLTISSPLEAHKSNTLTYHMVGVDVGFENP
MFACLEIDYEEADTDPTGEAATKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLISVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFICSATHRTKSMYF
FLVQTEQGDIFKVTLETDDDVVSEIKLKYFDTVPPATAMCVLKTGFLFVACEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFAPRQLKNLVMVDDIPSYAPILGCQVADLANEDT
PQLYLACGRGPRSSIRVLRHGLEVSEMAVSELPGNPNAVWTVKKRIDDEFDAYIIVSFVN
ATLVLSIGDTVEEVTDSGFLGTTPTLCCSALGDDALVQVYPDGIRHIRADKRVNEWKAPG
KKTIMKCAVNQRQVVIALSGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGSVPSGEQ
RSWFLAVGLADNTVRIISLDPTDCLSPRSMQALPSAAESLCIVEMGTVETSSEDDGVTIT
TGCIYLNIGLTNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIQMQGSEAVLAMSSRS
WLSYYYQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILALEKLGAVFNQITF
PLEYTPKRFAIHQETGKLIISETDHNAYTEETKTVRKKQMADEMREAAGEDEQELANEMA
DAFINEVLPEDVFSSPKAGTGMWASQIRVMDPINGHTYSKVQLAQNEAVLSLALVRFAVD
QKWYVVAGVAKDLQINPKISGGGFIDVYKVDSQTHQLEHMHRTEIDDAPGALCPFQGRLL
AGIGKVLRIYDLGKKKLLRKCENKHIPNQIVNIQGMGQRVYVSDVQESVYCIKYKRAENQ
LIIFADDTHPRWITSASLLDYDTVATGDKFGNIAILRLPHSVSDDVDEDPTGNKALWDRG
LLNGASQKAENICTFHLGEIVMSLQKATLIPGGSESLIYATMSGTVGALVPFTSREDYDF
FQHLEMHMRNENPPLCGRDHLSYRSYYYPVKNVMDGDLCEQFTSLDPAKQKSIASDLGRT
PSEVAKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgtacaacttcattctgcaacgtgccacgggcatcacgcacgcggtgcacgga
agcttcgccggcaccaagttgcaggaaattttgcttgccaagggcaaaggcctggagctg
gttcgtccggatccgaacacgggcaaagtgcacacgctgctgcagacggaagtgtttggc
gtggtgcgttcgctcatgtccttccggctgacgggcgggtcgaaagattatgccgtaatt
ggttcggattcgggtcgcatcgtgatcctcgagtacaacccggcaaagaatcagctcgaa
aaggttcaccaggagacgttcggcaaatcgggatgccggcgtatcgtgcccggccaatat
ttggccatcgatcccaagggtcgtgccgtgatgatcggagcggtcgagaagcaaaagctg
gtctacattctgaaccgcgattccgaggcccggctcaccatctcctcgccgctggaggcg
cacaaatcgaacaccctcacctaccacatggtgggcgtggacgttggtttcgagaatccc
atgttcgcctgcctggagatcgactacgaggaagcggacaccgatccaaccggtgaggcg
gccaccaagacacagcaaacgctcaccttctacgagctggatctgggcctgaaccatgtg
gtgcgcaagtactcggagccgctggaggagcacgccaacttcctcatctccgtcccggga
gggaacgatgggccgtcgggcgtgttgatctgctcggaaaactatctgacgtacaagaat
ctgggcgaccagcacgacattcgctgtccgattccgcgccgccgtaacgatctggacgat
ccggagcgtggcatgatcttcatctgctccgccacgcaccgtaccaagtcgatgtacttc
ttcctggtgcagacggagcagggcgacatctttaaggtgacgctcgaaaccgacgatgat
gtggtgtcggagattaagctgaaatacttcgacacggttccgcctgcgacggccatgtgc
gtgctgaagacgggctttctgttcgtggcgtgcgaattcggcaaccattatctgtaccag
attgcacatttgggcgatgacgatgatgagcccgagttcagttcagccatgccgctcgag
gagggcgatacgttcttcttcgccccgagacagctgaagaatctggtgatggtggacgac
attccgtcgtacgcaccgatccttggctgtcaggtggcggacttggcgaacgaggacaca
ccgcaactgtacctggcttgtggccggggtccacggtcatcgatacgtgtgcttcgccac
gggctggaagtgtcggagatggccgtatcggagctgcccggtaacccgaacgctgtgtgg
accgtcaagaagagaattgatgacgagttcgatgcgtacatcatcgtgtcgttcgtgaac
gctacgcttgtgctgagcattggcgacacggtcgaggaagtgacggacagtggcttcctc
ggcacgacaccgacactctgctgcagtgcgctcggcgatgacgctctggtgcaggtctac
ccggacggcatccggcacatccgggcggataagcgtgtgaacgaatggaaggcgccgggc
aagaagacgatcatgaagtgtgcggtcaaccagcggcaggtcgtgattgccctttccggc
ggcgagctcgtgtacttcgaaatggatccgaccggccaactgaacgagtacacggaacgt
aagaaaatgccgagcgaagtcatgtgtatggcgctcggatcggtcccgagcggcgaacag
cggtcgtggtttttagccgtcggtttggccgataacaccgtacgcatcatatcgctcgat
ccaaccgattgtctgtcgccccgctccatgcaggcactgccctcggcagccgagtcgctg
tgcattgtggaaatgggcacggtggaaacatcctccgaagatgacggagtcaccatcacg
accggctgcatctatctgaacattggactgacgaacggtgtgctgctgcggaccgtgctc
gaccccgtgtccggcgatctggccgacacccgcacgcgctacctcggttcccggccggtc
aagctgttccgcattcagatgcagggctcggaagccgtcctggccatgtcgagccggtcc
tggctgagctactactaccagaaccggttccacctgacgccgctgtcgtacgaaacgctc
gagtacgcgtccggcttttccagcgagcagtgctcggaaggtattgtggccatctcgacg
aacacgctgcgcattctggccctcgaaaagctcggcgccgtgttcaaccagatcaccttc
ccgctggagtacaccccgaaacggttcgccatccaccaggagacgggtaagctgatcatt
agcgaaaccgaccacaacgcgtacacggaggaaacgaaaaccgtgcgcaagaagcagatg
gcggacgagatgcgtgaggcggcgggtgaggatgagcaggagctggcgaacgagatggcg
gacgcgttcatcaacgaggtgctgccggaggatgtgttctcctcgccgaaggcgggcacg
ggcatgtgggcgtcgcagattcgcgtgatggatccgatcaacggccacacgtactcgaag
gtacagctggcgcagaacgaggcggtcctgtcgctcgccctcgtgcggttcgccgtcgac
cagaagtggtacgtggtggcgggcgtcgcgaaagacctgcagataaaccccaaaatcagc
ggtggcggctttatcgacgtgtacaaggtcgacagccagacgcaccagctcgagcacatg
catcgcacggagatcgacgacgcgccgggagcgctgtgcccgttccagggccggctgctg
gccggcatcggcaaggtgctgcgcatctacgacctcggcaagaagaagctgctgcgcaag
tgcgaaaacaaacacattcccaaccagatcgtgaacatacagggcatggggcagcgtgtg
tacgtgtcggacgtgcaggagtcggtgtactgcatcaagtacaagcgggccgagaaccag
ctgatcatcttcgccgacgacacgcacccgcgctggatcacgtcggccagcctgctcgat
tacgatacggtcgcgaccggcgacaagttcggcaacattgcgatcctccgcctgccgcat
tccgtgtcggacgatgtggacgaggatccgaccggcaacaaggcgctgtgggaccgtggg
ctgctgaacggagcgtcccagaaggcggaaaacatctgcaccttccatctgggggagatc
gtgatgtcactgcagaaggcaacgctcattccgggcggctcggaatcgctcatctatgcc
acgatgagcggtacggtcggggcgctggtgccgttcaccagccgggaggactatgacttt
ttccagcatctggaaatgcacatgcgaaatgaaaatccgccactgtgtgggcgcgaccat
ctgagctaccgcagctattactacccggtgaagaacgtgatggatggggatctgtgcgaa
cagtttacctcgctcgatccggccaagcagaaaagcatcgcctcggacctgggccgcacg
cccagcgaggtggcgaagaagctggaggatattcgcacacggtacgcgttctag
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