Anopheles coluzzii: 120948690
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Entry
120948690 CDS
T07312
Name
(RefSeq) probable nucleoporin Nup54
KO
K14308
nuclear pore complex protein Nup54
Organism
acoz
Anopheles coluzzii
Pathway
acoz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
acoz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120948690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoz03019
]
120948690
Messenger RNA biogenesis [BR:
acoz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120948690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
PEARLI-4
ATG14
HEPN_Swt1
DUF1539
Motif
Other DBs
NCBI-GeneID:
120948690
NCBI-ProteinID:
XP_040221242
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All DBs
Position
2:complement(102923382..102927708)
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AA seq
628 aa
AA seq
DB search
MSFNFGNTSALGSTSTPAKPAFGNFSFGGQTSTPAFGAPAATGATSAFGQPAATSAFGAT
AAAATAFGAAPGTATTGTGAFGTLGFGGATGGTTTAFGATPASSAPTFGFGTNTATAATP
AFGGFGTATSTAGTGFGGFGATTATSTSAPAFGGFGATAQPFGSSIATTSAPSFFGGLGA
SQPQASTATGFGGFGTGNTFGASTFGQPAAGGLNFGQSAFGQQQQQQQLQQQQQLAQALS
PEEAFVQSVFNVSIFGDERDTVISKWNYLQAMLGTGKSFYSHNAPPVEITPSNFLCRFKT
MGYSKLPGRDNKTGLVGLTINKTVAQIKEQQQQFIASMNQIFGNKPNITIVVENVKSIND
TKVQVIIYIEEKSTISNEVKRVLATEVASYLNQPMPKQQLTQLGIESVVALVLPEEDQLK
EYLDNPPKGIDPRMWEQAKMDNPDPKRFIPVPMIGFQDLKWRIKCQENETEIHASYLAKV
EKEIAELKQRHMNTTAKIAEHRRNFAELSHRILRVIVKQESTRKLGLALSPEEEAIRTKL
ENMHALVSTPTQFRGRLSELLSQMRMQRNQWAHGNFLNEYTLDKDATQEMQSFLTMQQKA
VSFLIDTIHKDMKTLKIISEGMTQLVQS
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcaactttggaaacacatcggcgctcggctcaacgagcacgccggccaagccg
gcttttggcaatttctcattcggtggacaaacgtcgactccggctttcggtgcacccgcc
gccaccggtgcaacgtccgccttcggtcagccggcagccacgtccgcgttcggtgcaacg
gcggccgctgctaccgcattcggtgccgcgcccggaacggcaaccaccggcaccggcgcc
ttcggaacgctaggattcggcggggccaccggtggaacgacgacggcattcggagcgacc
cccgccagttcggcaccgacgttcgggttcggcacaaacactgctacggctgcaacaccc
gcgttcggtggattcggtacggccacatcgaccgctggtaccggattcggaggatttgga
gccaccactgccaccagcacgagtgctccagcgttcggtgggttcggcgcgaccgcacaa
ccgttcggcagttcgatagcgaccacctccgccccatcgttcttcggtgggcttggagcg
agccagccacaagcaagcacggccaccgggttcggtggcttcggcactggcaacacgttt
ggtgcgtcgacttttggccagccggccgccggcggattaaactttggacagtcagcgttc
gggcagcagcagcaacagcagcagctgcaacaacaacagcagctcgctcaagccctctcg
cccgaggaagcgttcgtccagtccgtgttcaatgtgtccatctttggcgacgagcgggac
acggtcatttcgaaatggaactacctgcaggcgatgctcgggacgggcaaatcgttctac
tcgcacaatgcaccgccggtcgagattacgccgtccaactttctgtgccggttcaagacg
atgggctacagcaagctgcccggccgggacaacaaaaccggcctggtgggtttgaccatc
aacaaaacggtggcacagattaaagagcagcagcaacagttcattgccagcatgaaccaa
atctttggcaacaaaccgaacattacgatcgtggtggagaacgtcaagtcgatcaacgac
acgaaggtgcaggtcattatctacatcgaggaaaagtcaaccatctcgaacgaggtgaag
cgcgtgctggccaccgaagtggccagctacctcaatcaaccgatgccaaagcagcagctt
acccagctcggcattgagtcggtcgttgcgttggtgctgccggaggaggaccagctgaag
gagtatctggacaatccgcccaagggaatcgatccgcgcatgtgggaacaggccaagatg
gataatcccgacccgaagcgattcataccggtgccgatgattggttttcaggatctcaaa
tggcgcatcaagtgtcaggagaacgaaaccgaaatccatgcctcgtacctcgcgaaggtg
gagaaagagatcgccgagctgaagcagcggcacatgaacacgaccgccaagatagcggag
catcggcgcaactttgccgagctgagccaccgcatactgcgcgtcattgtgaagcaggaa
agtacgcgcaagcttgggctggcgctgtccccggaggaggaagcgatacggacgaagctg
gaaaacatgcacgcgctcgtgtccaccccgacccagttccggggccggctgagcgagctg
ctgtcgcagatgcgcatgcagcggaaccagtgggcacacggcaacttcctgaacgagtac
acgctggacaaggacgccacgcaggagatgcaatcgttcctgacgatgcagcagaaggcg
gtctcgttcctgatcgacacgatacacaaggacatgaaaacgctcaagatcattagcgag
ggcatgacgcagctggtgcagagctag
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