Anopheles coluzzii: 120948905
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Entry
120948905 CDS
T07312
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
acoz
Anopheles coluzzii
Pathway
acoz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acoz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120948905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoz03019
]
120948905
Messenger RNA biogenesis [BR:
acoz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
120948905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
HBS1_N
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
Ras
Roc
DUF4844
Motif
Other DBs
NCBI-GeneID:
120948905
NCBI-ProteinID:
XP_040221692
UniProt:
A0A6E8VBB6
LinkDB
All DBs
Position
2:23725842..23730381
Genome browser
AA seq
705 aa
AA seq
DB search
MSRHRNVRNAVYDDYDDDDYQYGQSVEDDCISPTDASQWIYDRAKGQQSMSEFLANNRDI
EEEDDDELAAETGREGPAHKRRDSECFQMPELNDEDRARLMSCMDEIRDIVGETCSDRQM
VEAIMKHDYECSKALDEILNSNKTPPAALGAKPGSKLTAGTAMEKGIGERLLERSEKKLQ
AAGRNVPIIVATPSADVRPSNDAASTVIITPNASVAKKTLAFEVTSSPRMQSPSVSGRNT
PEITEEAARQQQQQSFKSTPKEPSRNAKELFGKERGDRKDHIHMVVIGHVDAGKSTLMGH
LLYDTGNVSQRIMHKHEQESKKLGKSSFMYAWVLDETGEERERGITMDVGSTRFETAKKE
ITLLDAPGHKDFIPNMISGANQADVALLVVDATRGEFETGFEQGGQTREHALLVRSLGVS
QLGVVVNKLDTVGWSKERFDEIVNKLKVFLKQAGFRDADVTYVPCSGLTGENLVKDPTDP
ALTAWYSGPTLLKVIDSFKTPDRAIDKPFRLSVADIFKGTGSGFCLCGRIESGMVCVNDK
VLVCPSKEQAMVKNITIDELPQQTAFAGDQVSLTLANIDINNISVGYILSDIYHPVPLAT
RILARIVVFNIKVPITRGYPVLLHHQSLIEPATIRKLKAQLHKGTGEVIKKNPRCLGNNS
CALVEIEFQRPIGMERYADFKDLGRIMLRVEGVTIAAGLVTEIVK
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccaccgaaatgtgcgcaacgctgtctacgatgattacgacgatgacgactat
cagtacgggcagtcggtggaggacgattgtatctcgcccaccgacgcctcgcaatggatc
tacgaccgtgccaaagggcaacaaagtatgtccgaatttctcgccaacaatcgcgacatc
gaagaagaagacgacgatgagctggcggctgagacgggtcgcgaaggcccggcacacaag
aggcgcgattcggagtgctttcaaatgccggaactaaacgatgaagatcgcgcacggttg
atgtcctgtatggatgagatccgggatattgtcggcgaaacgtgcagcgaccggcagatg
gtggaagcgatcatgaagcacgattacgaatgcagcaaggcgctggacgagatactgaac
agtaacaagacgccacccgcggcgctgggtgcgaaacccggcagcaaactgacggcgggt
actgcgatggaaaaaggtattggtgaacgtttgctagaacgctcggagaagaagcttcaa
gctgctggccgcaacgtaccgatcatcgtcgcaacgccctcggccgacgtgcgcccttcg
aacgatgcagcctcgaccgtgatcataacgcccaacgcttcggtggcgaagaaaacgctc
gcctttgaggtgaccagcagcccccggatgcagtcacccagtgtgtctggacgcaatacg
cccgaaattaccgaggaagccgcccggcagcagcagcagcagtcgttcaaatccaccccg
aaggaaccgtcgcggaatgcgaaggagctgtttggcaaggaacggggcgatcggaaggat
cacatccacatggtggtgattgggcacgtggatgcgggcaagagcacactgatgggacat
ttgctgtacgacacgggcaatgtttcccagcgcatcatgcacaaacacgagcaggagagt
aaaaagctcggcaaatcgagcttcatgtatgcctgggtgctggacgaaacgggcgaggag
cgcgagcggggcatcacgatggacgtcggtagcacgcggttcgagacggccaagaaagag
attacactgctcgatgcaccaggacataaggactttatcccgaacatgatatcgggcgcg
aatcaggcggacgtggcactgctcgttgtggacgcgacacgtggtgagtttgaaaccggc
ttcgagcagggtggccaaacacgggagcacgccctgctggtgcgctcgcttggtgttagt
cagctgggcgtggtcgtcaacaagctggacacggtgggttggtcgaaggagcgattcgat
gaaatcgtgaacaagctgaaggtgttcctcaagcaggcagggttccgcgatgcggacgtt
acctacgtaccttgctctgggcttaccggcgagaatctggtaaaggatccaacggatcca
gcattgaccgcgtggtacagtggaccgacactgttgaaagtgatagattcctttaaaaca
ccggaccgtgctatcgataaaccgttccgcctgtcggtggcagacatattcaaaggtacc
ggttccggattctgcctctgcggtcgcatcgagtcgggcatggtgtgcgttaacgataag
gtgctggtgtgcccgagcaaggagcaggccatggtcaagaacattaccatcgacgagcta
ccacagcagaccgcgtttgcgggtgatcaggtctcgctaacgcttgccaacatcgacatc
aacaacatttcggtcggctacatcctgtccgacatttaccatccggttccgctcgccacc
cggatactggcacgaatcgtcgtgttcaacatcaaggtgccgatcacgcgcggctatccg
gtgctgctgcatcaccagtcgctaatcgagccggccaccatacgcaagctgaaggcacag
ctgcacaagggcaccggagaggtcatcaagaagaatccacgctgtctgggaaacaattcg
tgcgcgctggtggagattgaatttcagcgaccgatcggcatggagcggtatgccgatttt
aaggatctcggcagaattatgctgcgcgtggagggtgtgacgattgctgccgggctggtg
acggagattgtaaagtag
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