Anopheles coluzzii: 120948960
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Entry
120948960 CDS
T07312
Name
(RefSeq) poly(A)-specific ribonuclease PARN-like isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
acoz
Anopheles coluzzii
Pathway
acoz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acoz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120948960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoz03019
]
120948960
Enzymes [BR:
acoz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
120948960
Messenger RNA biogenesis [BR:
acoz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
120948960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
RNA_bind
R3H
Motif
Other DBs
NCBI-GeneID:
120948960
NCBI-ProteinID:
XP_040221789
LinkDB
All DBs
Position
2:111737569..111740258
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AA seq
633 aa
AA seq
DB search
MDITKQNFLEQLPSIREAIQNATFFAMDCEFTGLASDRTIFPFDTPEEVYLKMVENSPPY
IIVQFGLCAFRVEPPGEEEENEKKDGQPRVSYQCYNFYCYPKGRTNVFSCQGESMRFLAD
NGFDFNRLFREGLSYANETEEQRYRADLKDRQATRAANILAAAESDLTEEEPKLGEVNDV
NMIPVPPEHQQQVDDTAASIEEFLQSDRQELIVGSCNAFQRKLIYQMIEQRYQRKVSTST
VSLENNQKAIKVERKRSTEEEQALDEQRRTRENDDLETNIGLSLVLQELAKARKLIIGHN
MLLDLFYVLRQFFKPLPADYQEFKKLTKEYFPLLLDTKYLCTNAEIKVNVNSSVLAHVYD
AVSKAPFSIPTVHPELPDYQYSVDDEKKHEAGYDAYLTGLCFLGLVSKFKANLLQLPKDP
NLKHYLNRIFITRLTDVNYIYLNGKEPTQTREHIFYATFPETWRTGDIQNKFKPFGPVHV
SWLDNTSAFVALHNRSAASSVLKMIGYHSGFKVYNFAQFTQMKLQRPGAKRGRNGSSSAS
PGEDAGVRSAQPVNQRPSGEEKGQKEGQKIERPQTITTAAKRKGTDEATPPTNEADKDAT
AAKDDEHDNDEDNGGGWRTVKKARKTFTDNNDW
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggatatcaccaagcaaaatttcctcgagcaactcccgtctataagggaagcgatacag
aatgcaacgttctttgcgatggactgtgagttcactggacttgcctcggatcgtaccatt
ttcccattcgatacgccggaagaagtgtatctgaagatggtggaaaacagccccccgtac
atcatcgtacagttcgggctgtgtgcgttccgggtggaaccacccggcgaggaggaggag
aacgagaagaaggatggtcaaccgcgcgtatcctaccagtgttacaacttctactgctat
cccaagggccgcacgaatgtgttcagctgtcagggcgagagtatgcgcttcctcgccgac
aatgggttcgactttaatcgtctcttccgcgaaggactttcgtacgccaacgaaacggag
gagcaacgctatcgggcggatttgaaagaccggcaagctacgcgggcggccaacattctc
gctgcggcggagagtgacctgacggaggaagaaccgaagttgggggaagtgaacgatgtc
aacatgataccggtgccacccgaacaccagcaacaggtggacgatacggcggcgagtatt
gaggagtttttgcagtccgatcggcaggagctgatcgtcgggagctgcaatgcgttccag
cggaagctcatctatcagatgatcgagcaacggtaccagcgaaaggtgtccacttcgacg
gtttcgcttgagaacaaccagaaagcgatcaaggtggaacggaaacgttcgacggaagaa
gagcaggcgctggatgagcagcggcgaacgcgcgaaaacgacgatcttgagacgaacata
gggttgtcgctggtgctgcaggagctggcaaaggcacggaaactaatcattggccacaat
atgctgctggatttgttctacgtgctgcgccaattctttaaaccactgccggcggactat
caagagtttaagaagctgacgaaggaatatttcccacttcttctagataccaagtatcta
tgcacgaatgcggagattaaggtgaatgtcaactcctccgtactagcacacgtgtacgat
gcggtaagcaaggcaccattctcgatccctacggtgcatcccgagctaccggattatcag
tacagcgtggatgacgagaaaaagcacgaagcaggctacgatgcttaccttacggggtta
tgtttcttggggctggttagcaaattcaaagctaatctgctgcaacttcccaaagatccc
aacttgaaacactatctaaacagaattttcatcactcgcctaaccgacgtgaactatatt
tatctgaacgggaaagaacccacacaaacgcgggaacacatcttctacgcaacgttccca
gaaacctggcgcaccggggacatccagaacaagttcaaaccgttcggccccgtgcacgtt
agctggctggacaatacgtccgcgtttgtggcattgcacaaccgtagtgccgcgagctcg
gtgctgaaaatgatcggatatcactccggcttcaaagtgtacaactttgcacaatttacg
caaatgaaactgcaacgccctggagctaaacgaggacgaaacggttcgagtagtgctagc
cccggagaagatgcaggagttcgaagcgcacaaccagtcaatcaacggccgagcggggaa
gaaaaaggacaaaaagaaggccaaaaaatagagcgtccgcaaacgatcaccactgccgcc
aagcggaagggtacggatgaggcaacgccgcctacgaacgaggcggacaaggatgctact
gctgccaaggacgacgagcacgacaacgacgaagacaacggtggcggctggagaacggtg
aaaaaggcgcgcaaaacattcaccgataataacgattggtag
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