Anopheles coluzzii: 120950931
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Entry
120950931 CDS
T07312
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
acoz
Anopheles coluzzii
Pathway
acoz03440
Homologous recombination
acoz03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
acoz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120950931
03450 Non-homologous end-joining
120950931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acoz03032
]
120950931
03400 DNA repair and recombination proteins [BR:
acoz03400
]
120950931
DNA replication proteins [BR:
acoz03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
120950931
DNA repair and recombination proteins [BR:
acoz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
120950931
BRCA1-C complex
120950931
NHEJ (non-homologous end-joining)
MRX complex
120950931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
SbcC_Walker_B
AAA_15
SMC_N
DUF3450
AAA_21
DUF724
AAA_29
PspA_IM30
ABC_tran
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
120950931
NCBI-ProteinID:
XP_040225281
UniProt:
A0A6E8VGX3
LinkDB
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Position
2:complement(41394187..41398479)
Genome browser
AA seq
1308 aa
AA seq
DB search
MSTINKLEIRGIRSFGVDRADVQQINFRSPLTLIVGQNGCGKTTIIECLKYGLTGEVPPG
TNRGVGFVHDPKIFNTVESLGQVKLMVKDFTGNTVTAIRSMKITHKGKNPKFETMDSTIT
MENAQTKEKVTMTRSRVTDINNEMCDAMGVSKAILNNVIFCHQEDSCWPLEEPKELKKKF
DAIFGTTEYNRVIDKLIKISKEYNEKLKEKQGDLKLLQNVKAQAETKQLQLEDGERNMAR
LTQMIGELEEDIRPIQSKLEQLALVERQYSSLLAKKIEFNSKIKSKHEQSQQLRSKINKL
FEGSLPELEMEVRIFQQTSASKRSELEDEEAELQRLKLQDRSLQSKLQSIDGQKIELAEK
QKRERELQIERGKKIRALGDKLSLSLVEDYGAASVSASVVEAALGSIRNALKAQEATVQS
KSKAFEEEDAQAQKRIDKLRETKATLESDCTSKRKQIEQLEREKLQTAREVAEIERSAET
LKRLIDEIDRLEQEYETQVSTADLPAKRKELAERKLLRDQLQDQLDKLDERISSLDAVAM
KEQELTLKEQQCTGREAELRRLRNKHGDSLRRLFPDRTIESNYKSNLQNLYDELQKEVKT
VNEKVRRTQATVTEMETTRKSQKQQLDRLERELADAEEKIYSACRGNAYEEVLAKLNEKI
QKNNMEHGEARSAVVLYQKFIANIENDRCCPVCEKGLESEDAHEVSGKLGDEIRRLPEKI
ETLERTLKKDRADYDKLLALKPISERLEKQRKELPQLKQQLQDTEKRLSTASDELEEYQL
AVSEPTANMQLINAIVGDMSVLDKLGSELERMKRGVEELRAQLGPNMAEGVTIESLKSER
EALRAKFKTERNRTDELQNTIDTKTEKLNNLQARNNQMKSKKLKLQESVQSLEQKRASVN
ELGAKIATLEEEFKDAERRLTPVRQQLQQELEQKQRSKEQNNKELQRLRKALEELRWEET
AIVRLSGELDDLAALNLGVELSRLQAKREQTQQEQDQLKRTMDGKAKSIEKLRQDIANQH
LQERDLLDNRDLKRLMRETADLEAELAALVKSMGEMEVCSVQKERDRLIDLRDKLQARRS
ELNGQVGELQRQLNELRKELNRSEFRNAVRNYVTTLTESIVQRKIISDIKKYRDALESAL
REYHTEKMQEINRTIFSLWRDIYRGNDIDYIRINTVDDGVAERSDKRRAYTYGVVQAKND
VEIDMRGRCSAGQKVLASLIIRLALAETFSSNCGVMALDEPTTNLDRDNIDSLCESLRRI
VSEREGGHFLLIVITHDEEFVTKLEKFENYYRISRNSEGKSVIKEEQL
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgataaataagcttgaaatacgtggaatacgcagctttggagtggaccgtgcc
gatgtgcagcaaatcaatttccgctcgccgctcacgctgatcgtgggccagaacggttgc
ggcaagaccaccatcatcgaatgcctgaagtacgggctgacgggagaggtgccgccgggc
acgaaccggggcgtcggcttcgtgcacgatcccaagatattcaacaccgtggagagcttg
gggcaggtgaagctgatggtgaaggattttaccggcaacacggtgacggcgatccggtcg
atgaaaatcacgcacaagggcaagaaccccaagttcgaaacgatggactcgaccatcacg
atggagaacgcccagacgaaggagaaggtcacgatgacgcggtcgcgcgtcaccgacatc
aacaacgagatgtgcgacgcgatgggcgtctcgaaggccatcctgaacaatgtgatattc
tgccaccaggaggactcctgctggccgctggaggagccgaaggagctgaagaaaaagttc
gacgccatcttcgggacgaccgagtacaaccgggtgatcgataagctgatcaagatcagc
aaggagtacaacgagaagctgaaggagaagcagggcgacctgaagctgctgcagaacgtg
aaggcgcaggcggaaacgaagcagctgcagctggaggacggcgagcggaatatggcaagg
ctgacgcaaatgatcggcgagctggaggaggacatccggccgattcagagcaagctggag
cagctggccctggtcgagcggcagtactcgtcgctgctagcgaagaagattgagtttaac
tccaagataaagagcaagcacgagcaaagccaacagctccgttcgaagataaacaaactg
tttgaaggatcgttgcccgagctggagatggaagtgcgaatctttcagcaaacgtccgcc
tcgaagcggtccgagctggaggacgaagaagcggagctgcagcgcctcaaactgcaggac
cgttccctgcaaagcaagctgcagtcaatcgatgggcaaaagattgagctcgccgaaaag
cagaaacgcgaacgggagcttcagatcgagcgaggcaaaaagattcgggcgcttggcgat
aagctttcgctctcgctggtcgaagattatggtgctgcttcggtcagtgccagcgtagta
gaggctgccctcggctcgatccgcaatgcgctcaaagcgcaagaagcgacggtccaatcg
aagagcaaggcctttgaagaggaagacgcacaggcacagaagcgcatcgacaagttgcgc
gaaacgaaagccacgctggagagcgactgcacctccaagcgcaagcagatcgagcagctg
gagcgtgaaaagctgcagacggctcgcgaagtggccgaaatcgagcggtcggccgaaacg
ctgaagcgactgatcgatgaaatcgatcggctcgagcaagagtacgaaacgcaggttagt
actgcggatctgcccgcgaagcgcaaggagctggcggaaaggaagttgctgcgcgatcag
ctgcaggatcagctggacaagctggacgagcgcatcagctcgcttgatgcggtggccatg
aaggagcaggagctgacactgaaggagcagcagtgcaccgggcgggaggctgagctgcgt
cggctgcgcaacaagcatggcgacagcttgcggcgcctctttcccgaccgcacaatcgag
tcgaactacaagagcaatctgcaaaacctgtacgacgagctgcaaaaggaggtgaaaact
gtgaatgaaaaggtgcgccgcacgcaggccacggtgacggagatggaaacgacccgcaaa
agccagaagcagcagctcgatcggctggagcgtgagttggccgacgcagaggagaaaata
tacagcgcctgccggggcaacgcgtacgaggaggtgctggccaagctgaacgaaaagata
cagaaaaacaacatggagcacggcgaggcacggtcggccgtcgtgctgtaccaaaagttc
attgccaacatcgaaaacgatcgctgctgtccggtgtgcgaaaaggggctggagagtgag
gacgcgcacgaggtgagcggcaagctgggggatgagattcgacggctgccggagaagatt
gaaacgctcgagcggacgctcaagaaggatcgggccgattacgacaagctgcttgcactg
aaaccgatctcggagcggttggaaaagcaaaggaaggaactgccccagctgaaacagcag
ctgcaggatacggagaagcggctcagcaccgcgtcggacgagctggaagagtaccagctg
gcggtgtcagaaccgacggcaaacatgcagctgatcaatgcgattgtcggcgatatgagc
gtgctggacaagctgggcagcgagctggagcgcatgaagcgtggcgtagaggagctgcgt
gcccagctggggccgaacatggccgagggcgttaccatcgagtcgctcaaatcggaacgg
gaagctttgcgcgccaagttcaaaacggagcgaaatcgcaccgacgagctgcagaacacg
atcgatactaaaacggaaaagctgaacaatctgcaggctcgcaacaatcagatgaagtcg
aaaaagctgaagctacaggaatcggtccaatcgttggagcagaagcgcgcgtccgtcaac
gagctgggtgcaaaaattgccaccctggaggaggaatttaaagacgccgaacggcgactc
accccggtgcggcagcagctgcagcaggagctagagcagaagcaacgctccaaggagcaa
aacaacaaagagctgcagcggttgcgcaaagcgcttgaggagctgcgctgggaggaaacg
gcaatcgtacggctgagcggcgagctggacgatctggccgcactcaatttgggcgtcgag
ctgagccgactgcaggcgaaacgagaacagacgcagcaagagcaagaccagctaaagcgc
acgatggacggcaaggcgaaaagcatcgaaaagctgcggcaagacatcgccaatcagcat
ctgcaggagcgggatctgctggacaatcgcgatctgaagcgtttgatgcgcgaaacggcc
gacttggaggcggaactagccgcgctggtcaagagcatgggcgagatggaggtgtgcagt
gtgcagaaggagcgcgatcggctcattgatctgcgcgataagctgcaggcccgccggagc
gaactgaacggccaggtcggcgagctgcagcggcagctgaacgagctgcgcaaggagctg
aatcgcagcgagttccgcaacgccgtccgcaactacgtcacgacgctgaccgaatcgatc
gtgcagcggaagatcatcagcgacatcaagaagtaccgggacgcgctggaaagtgcactg
cgcgagtaccacacggagaagatgcaggagatcaaccggaccatcttttcgctgtggcgc
gatatctatcgcgggaacgacatcgactacattcgcataaacacggtggacgacggggtg
gcggagcggtcggacaagcgccgtgcctacacgtacggcgtggtgcaggcgaagaacgat
gtggagatcgatatgcgtggccgctgcagtgccgggcagaaggtgctggcctcgctcatc
atacggctggcgctggcggaaacgttcagcagcaactgtggcgtgatggcgctggacgaa
ccgaccactaacctggaccgggacaacatcgactcgctgtgtgaatcgttgcgtcgcatc
gtgtcggagcgggaaggaggccactttctgctgatcgtcatcactcacgacgaggagttt
gtgaccaagctggaaaagtttgaaaactactatcgcatttcgcgcaacagcgaaggcaaa
tcggtgattaaagaggagcaactttaa
DBGET
integrated database retrieval system