Anopheles coluzzii: 120952374
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Entry
120952374 CDS
T07312
Name
(RefSeq) endoribonuclease Dcr-1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
acoz
Anopheles coluzzii
Brite
KEGG Orthology (KO) [BR:
acoz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acoz03036
]
120952374
Chromosome and associated proteins [BR:
acoz03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
120952374
microRNA pathway
RISC loading complex
120952374
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_dsRBD
Dicer_platform
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
Dicer_PBD
dsrm
Motif
Other DBs
NCBI-GeneID:
120952374
NCBI-ProteinID:
XP_040227609
LinkDB
All DBs
Position
2:28073522..28081407
Genome browser
AA seq
2336 aa
AA seq
DB search
MSLFHWTDGNIHTTALTPRDYQTELLATAREENLIVCIAHNSAKEFLAVKLIQSMRTNRW
SSHPEAPGKAIYLTRMDRSLLSSMVSNLTDLQVANVDDVEDSEGSHEPDGASNTPVTDVA
SADVLFFGSETTLLQYIEQGTVRVQDISLMIVDECHKNYGRQELWEICARLTHQAPSSDR
PAQRTRILGLAGPLHGAGCTPERLCWELHYLERCLRARIETASDITSVLRFSTKPTELIL
ECIPPKPSNLTQLLRMLIQRQIAFLKQHRYEPLAVYGLDGNDSASDKPDTDGEPEKDEEN
DDLRRELRSIPDPTVGPLSYLKQYLELLDEFGPWGADRGALELLTTIDQEKVKVPYDRHF
LLFCMVYTTLLQARATVASVFAQHDTELERIKRYSTPKVRRLLEVLAWFGEQRNRPKDRN
QPATLHHHQQVHNQQRILYCFCRNVECKELEKSYHTFGAQIADVDERIKQLDGLLASVRK
RTERLNLKHKAVDNASAEGGGTLGVQSPRHGHESRANNFRRKRFAGGGHSHHRSNDTTDA
LCGLIFCNNRAMARILYVLLYEVSRSQREFEFISPQYTVDKVATNPQNCLKQTAIEHRKQ
EEVLKRFRMHECNLLIGTSVLEEGIELPKCNLVIRWNSPANYRSYAQCKGRAKAPGAYHV
LFVTPENAASRNEQQEDMASIEDVSLDGMIPEGPEDDNTRETIDDQDRRMIETATDAMIE
QVAIYREVEKLLLAKCRNGEPPDWELKHADCFNHCLEVYRPGSGGAVALQSNGTCASLWL
GNAIQTLNKYCAKLPSDTFTKLTPIWRCATTVRKGRKLYQYTIRLPINSPWKEDILGLPM
PTETLARRLAAYMTCRMLHAAGELDNSFQPFGKEAFRAFEADWENFELEESDAKILSENS
DPRPGTTKRRQYYYKRIASVFNECRPDAETVAYLYHIRMELICPIPEEQNTRGRKIYAPE
ESAQGFGILTTKLIPKISSFPIFTRSGEVKVSLDLCPQRVKLSAHQLEMVNCFVKYTFTK
VLRLQKSLMLYDANATENCFFIVPTVRQAVAGAAGKDEPPLQSDDVMVDWEFVEKIATNV
HRSGPTFIPDEARKGYTFDVGKFRDAVVMPWYRNRDQPQYFYVAEICNHLSPKSTFPGSN
YATFEEYYHRKYKIHIQNQRQPLLDVDHTSARLNFLTPRYVNRKGVALPTSSEETKRAKR
ENLEQKQILVPELCTIHPFPASLWRAAVCLPCVLYRINALLLADEIRRQVARDLRLGWEN
VDELQEGQFQWPMLSFGWNLADVLRKTKEQKIAQAQEAIDASAPEAEDEVELDKEVPNVR
DAAEVDEEDGLKMENGVIAEVEKSQVDGEDDTGDKKTDSDGTLLEIGTWSNEMAVGVGTD
NDMGEEGRRGASSPSFLRYDSDCSSNSSANFYSSDEYDEEDDYYLYDGSEKPKNAIEPSQ
EAVSGTDNANDSGDKPGSRNRTITQSQDTVVNLGGRLKIEFKSETDAEAIDSECDLQRQR
TQQSIIERSRQNDMLYQSSKNAVDGFCYSPSDRQCAEEREQAEQRFERQKNHTKDTIRQQ
GSLVRWNEPLSVSHWRSKLDESEAATLGALMDDLGGQPFTELVPYVEPEQLFELLVRNGS
SGERWLRLHDLYCLNRPFFPERYTIFRGGSQFDNFLDESCQEGEGASSPPKVIELTIGDP
FPAIAAGQMACNYKPKQHSMRSDEANKNGHDSAGVLSTTDEAGGVDYFSFDYQPDLSQHP
GPSPAIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCRYDNVHEGKLSHLRSKQ
VSNLNLYRLGRRKRLGDCMIAAKFEPHDNWLPPCYYVPKELEQTLIDAKIPACHWNLADL
PDIKRLSCAEICQLVKERARAKRREDVDRFDLQHADSNGGEDGNEDDDDDDDDDEDDTTT
GEGNEHEADNGSCYIPYNLVTQHSIPDKSVADCVEALIGAYLIECGPRGALLFMAWLGIR
VLPIREPPGKLNSNNETALTPYKATGQNDGPLSIGVTIAEYGHWVAPPSPMVRANITFGG
IETGAAATSRELARLLQGFEEFEQALGYRFRDRSYLLQAMTHASYSPNRLTDCYQRLEFL
GDAILDYLITRHLYEDRRQHSPGALTDLRSALVNNTIFASLAVRHGFHKYFLHLSPGLQE
VIDRFVRIQQENGHRITEEEYYLPDEDDELGEYGAMGEDGPGEGRGVGEAEDVEVPKALG
DVFESIAGAIFLDSDMSLDTVWKVYRKMMGPEIEKFSSSVPKSPIRELLEMEPETAKFGK
PEKLTDGRRVRVTVEVFGKGTFRGIGRNYRIAKCTAAKCALRQLKKLGYANHHKRR
NT seq
7011 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgttccactggacggatggcaacatccacaccacagccctcacgccccgggac
tatcagaccgagctgctggctacggctcgggaagaaaatcttatcgtctgtatagcgcac
aattccgccaaagagttcctggccgtaaagttgatccagtcgatgcgcaccaatcgctgg
agcagtcaccctgaagcaccgggaaaagccatctacctcacgcgaatggatcgaagcttg
ctgtcgtcgatggtttcgaatttgaccgacctacaggtcgccaacgtcgatgatgtggag
gacagtgaagggtcacacgaaccggacggtgcttccaacacgccagtgacggatgttgct
tcggccgatgtgctgttcttcggcagtgaaacaacgttgctgcagtacatcgaacaaggt
acggtacgggtgcaagacataagcctgatgattgtggacgaatgccacaaaaactacggt
cgacaggaactgtgggagatctgtgctcgactgacgcatcaggcaccgtcgtccgatagg
cccgctcaacggacgagaatcttgggattagctggtccattgcacggtgcgggctgtaca
ccggaacggttgtgctgggagctgcattaccttgaacgatgcttgcgtgcacgtatcgaa
actgcgagcgacatcacaagcgttctcagattcagcacaaaacctacggaactaatcctg
gaatgcatcccacccaagccatccaatttgacgcagcttcttaggatgttaatacagcgt
cagatcgctttcctgaagcagcatcgctacgaaccgctagccgtgtacggactggacggt
aacgatagcgctagtgataagccggacacagacggggaaccggagaaggatgaggaaaac
gatgacctgcgccgtgagctaagatccatccccgatcccacggtcggtccgttgagctac
ctaaagcagtatctcgagctgctggacgagttcggaccctggggcgctgatcgcggtgca
ctcgaacttctaacgaccatcgaccaggagaaggtgaaagtgccttacgaccggcacttt
cttctgttctgcatggtgtacaccacgcttctgcaggcaagagcgacggtggcgtccgtc
ttcgcacagcacgacaccgaactggagcgcatcaagcgctattcgacgcccaaggttcgc
cgcctgctcgaggtgctggcatggttcggtgaacaacgcaaccggccgaaagatcgcaac
caaccggccacactgcaccatcatcagcaggtgcacaatcagcagcgcatattgtactgc
ttctgccgcaacgtcgagtgtaaagagctggagaaaagctaccacactttcggcgcccaa
atagcggacgttgatgagcggatcaagcagctggacggtttgctagcgtccgtgcgcaag
cgaaccgaacggttgaacctaaagcacaaagccgtcgacaatgcgtccgccgagggtggt
ggtacgctaggagtgcagtcaccccgccacggtcacgagagccgagcaaacaatttccgc
cgcaagcgattcgcgggcgggggacattcgcaccaccgatcgaacgacacgaccgatgcg
ctgtgcgggttaattttctgcaacaaccgggcgatggcccgcattctttacgtgctgctg
tacgaggtgtctcgttcgcagcgcgaatttgagttcatcagcccacagtacacggtggac
aaggtggccaccaatccgcaaaactgcctcaagcagaccgccatcgagcatcgcaagcag
gaggaggtgctgaaacgcttccggatgcacgaatgcaacctgttgattgggacgtccgtg
ttggaggaaggcatcgagctgccaaagtgtaacctagtaattcgctggaacagtcccgcc
aactatcggtcctacgctcagtgcaagggtcgggcgaaagcgccgggcgcgtaccatgtg
ttgtttgtcacgcccgaaaatgctgcctcgcgcaacgaacaacaggaggatatggcatcg
atcgaggatgtttcacttgatggcatgattcccgaagggccggaagacgacaatacgcgc
gaaacgatcgatgatcaggaccgaagaatgatcgaaacagcaacagatgcgatgatcgag
caagttgccatctaccgtgaagtggaaaagcttttacttgccaagtgccgcaatggagag
ccgcccgattgggagctgaagcatgccgactgcttcaaccactgtctagaagtctatcgt
ccgggtagtggtggtgccgttgcacttcaatccaacggaacgtgcgcctcactgtggctg
ggaaatgccatccaaacactcaacaagtactgtgccaagctgccgagcgatacgttcact
aagcttactccgatttggcgctgtgccactaccgtccggaaggggcgcaagctgtaccaa
tacaccattcgcctgcccataaactcgccctggaaagaagacatattgggattgccgatg
cctacggaaacgctagcacgcaggctggctgcctatatgacctgccggatgctgcatgcc
gctggggagcttgacaattcctttcaaccgttcggcaaggaagcctttcgtgcgttcgaa
gcggactgggaaaactttgagctggaggaatcggacgcaaaaatactgtccgaaaacagc
gaccccagaccgggcacaacaaaacggcggcaatattactacaaaaggatcgcttctgtg
ttcaacgagtgtcgaccggacgctgaaaccgtcgcctatctctaccacatacgcatggag
ctgatctgccccatccccgaggagcagaatacgcgcgggcgcaaaatatacgcaccggaa
gaatctgcacaagggtttggcattctgaccacgaagctgataccaaagataagctccttt
cccatattcacccggtccggcgaggtgaaagtgtcgctcgatctgtgcccgcagcgggtt
aaactgtccgcccaccagctggagatggtaaactgtttcgtgaagtacacgttcaccaag
gtgttgcgcttgcagaagagcctgatgctgtacgatgcgaacgcaacggagaactgtttc
ttcatcgttccgacggtcaggcaagctgttgcgggtgcggctggtaaagacgaaccaccg
ctccaatcggacgacgtgatggtggactgggagtttgtggaaaagattgccacgaacgtg
catcgcagcggaccaacattcataccggacgaggcacgcaagggctacacgttcgatgtg
ggcaaatttcgggacgccgttgtaatgccgtggtatcggaaccgcgaccagccgcagtac
ttttacgtggcggaaatatgcaaccatctgtcgccgaagagcacctttcccgggtcgaac
tacgcgacgttcgaggagtattaccatcgcaagtacaaaatccacattcagaaccaacgc
cagccgctgctggacgttgaccataccagtgcgcggctaaacttcctgacgccccggtac
gttaaccggaagggtgtagcgttgccgaccagctcggaggaaacgaagcgggccaagcgt
gaaaacttggagcagaaacagatcctcgttccggagctgtgcacgatacatccgttccct
gcctcgctgtggcgtgcggccgtctgcctgccgtgcgtactgtaccgcatcaacgcgctg
ctgctggcggatgagatacgacgccaggtggcacgcgacctgcggctgggatgggaaaat
gtcgacgagctgcaggagggccagttccagtggccaatgctaagctttggctggaatctg
gccgatgtgctgcgcaaaacgaaggagcagaaaattgcgcaagctcaggaagcgatcgat
gccagtgcgccggaagcggaggatgaagtggagctagacaaggaagtgccgaacgtgcgt
gatgctgcggaggttgatgaggaagatgggctaaagatggaaaacggtgttattgctgag
gttgaaaagagtcaggtggatggagaggatgatactggcgataaaaagactgatagcgat
ggaacgctgcttgaaattggtacatggtcgaacgaaatggcggtgggcgttggaaccgat
aacgatatgggtgaagaaggtaggagaggcgcatcgtcaccctcgttcctgcggtacgat
tccgactgttccagcaacagcagtgccaatttttactcttcggacgagtacgacgaggag
gacgattactacctgtacgatggttcggaaaagccgaaaaatgcgatagaaccgagccag
gaggcagtatcgggcacggacaatgcgaacgactcgggcgataagccgggcagtaggaac
cggaccatcacgcagtcacaggatacggtggtgaatctgggtgggcggttgaagatcgag
ttcaagtcggaaaccgatgccgaagcgatcgattccgagtgtgatctgcagcggcagcga
acgcagcagagcatcattgagcggtcacgccagaacgatatgctctatcagagctcgaaa
aacgcggtcgatgggttctgctactcgccgagcgatcggcagtgcgccgaggagcgggag
caagcggagcaacggtttgagcggcagaaaaatcacaccaaagacaccatccgccagcaa
ggcagcttggtgcgatggaacgaaccgctgtccgtaagccactggcgatcgaagctggac
gagtcggaagcggccacccttggcgcactgatggacgatttgggcgggcaaccgttcacg
gagctcgtaccgtacgtcgagccggagcagctgttcgagctgcttgtgcgaaacggtagc
agcggggaacgatggctccgattgcacgatctctactgcttgaatcgaccgttcttcccg
gaacggtacaccatcttccggggcggttcacagtttgataactttctggacgaaagctgc
caggaaggtgagggtgctagttcgccaccgaaagtgatcgagctgactattggcgatcct
tttccggcgatagccgccgggcaaatggcttgcaactacaaaccgaaacaacattccatg
cggagcgacgaagcgaacaagaacggccacgacagtgcgggtgtgctcagtacgacagat
gaggccgggggtgttgattacttcagtttcgattatcagccagatttgagccaacatccc
ggtcccagtccggctattattctacaagcgctaaccatgtcgaacgccaacgatggcatc
aacctggagcgattggaaacgattggcgattcctttctgaagtacgccatcaccacctac
ctttactgccggtacgacaacgtgcacgagggcaagctaagccacctgcggtcgaagcag
gtgtccaatctgaacctttaccggctgggtcgcaggaagcggttaggcgactgcatgatt
gcggccaaatttgaaccacacgataactggctgccaccctgctactacgtgccgaaggag
ctagaacaaacgttgattgatgcaaagattcctgcctgccattggaatctggccgatctt
ccagacatcaagcgtctgtcgtgcgctgaaatctgtcaactagtcaaggaacgtgcacgg
gccaaacgtagagaggatgtcgaccggtttgacctacaacatgcagacagtaacggtggt
gaggacggaaatgaagacgacgatgacgacgacgacgacgatgaagacgatacaaccact
ggcgaagggaacgagcacgaggcggacaatgggtcctgctacatcccgtacaatttggta
acgcagcacagcattcccgacaaatcggtggctgactgtgtggaagccctgatcggtgcc
tacctcatcgaatgtggcccccgcggagcgctcctctttatggcatggcttggcatacga
gtgctccccatccgtgagccgccgggaaagcttaattcaaacaacgagacggcgcttact
ccttacaaagctactggacagaatgatggaccgctgtccattggcgtcacgattgctgag
tatggtcactgggttgcaccgccctcgcccatggtgcgggccaacattacgttcggtggc
atcgaaaccggtgccgcggcaacgtcccgcgagctggcccggctgctgcaagggttcgag
gagttcgagcaggcgcttggctaccgctttcgtgaccgttcctacctgctgcaagccatg
acgcacgcttcgtacagcccgaaccggctgacggattgctaccagcggctagagtttctg
ggcgatgctatcctcgactacctcatcacgcgccatctgtacgaggaccgcaggcagcat
tcaccgggcgcgctcacagacttgcggtcggcgctggtgaacaataccatctttgcttcg
ctcgcggtacgtcacggatttcataagtacttcctgcacctgtcgcccgggctgcaggag
gtgatcgatcgtttcgttcgcatccagcaagagaacgggcatcgcatcacggaggaggaa
tactacctgccggacgaagatgacgagctgggcgagtacggtgcgatgggggaggacggt
cccggcgagggccgcggtgtgggggaggcggaagatgtggaagtgccgaaagcgttgggc
gacgtgttcgaatcgattgccggtgccattttcctcgattccgacatgtcgctcgatacg
gtgtggaaggtgtatcggaaaatgatgggaccggaaatagagaaattcagcagctcggtc
ccgaaatcgccgatacgcgaactgctcgagatggaaccagagacggccaaatttggcaaa
ccggagaagctgacggacggacgacgcgtgcgggtaacggtggaagtgttcggcaaaggt
acattccgtggcattggaaggaactatcgcatcgccaagtgtacggcggcaaagtgtgcc
cttcgccagctcaagaagctcggctatgccaaccatcacaagcgccgatag
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integrated database retrieval system
