Anopheles coluzzii: 120952847
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Entry
120952847 CDS
T07312
Name
(RefSeq) exosome component 10 isoform X1
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
acoz
Anopheles coluzzii
Pathway
acoz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acoz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120952847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoz03019
]
120952847
Messenger RNA biogenesis [BR:
acoz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
120952847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
120952847
NCBI-ProteinID:
XP_040228318
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All DBs
Position
2:18941686..18945168
Genome browser
AA seq
992 aa
AA seq
DB search
MAAKMTDNKKQKKAGKSNAQAAESNGIEMGSPSIKNDQASDNEGIREMCEQGQNAIIAGM
KAANAMPSGRSRDLYAAHPEFIKIMDTRANQVLHIIANILQLQGVQGNILHRDPDERLEM
IHDFNDNILERIHSNLDEMAGIRKVVPTVLVQSEVQVPVTPRYRLSGAWNERQKGEPVKA
TLITGTNIARPQVKFKVPVDNSRLNPFVPKIRDKPHSLKPLAVLPEYDEAGNIVSYLHPY
EFELDRFQPAKHVFERTTPQEPVPLERTPLMYVDQESQLAELVRELQAAKEIAIDLEHHS
YRSYQGFTCLMQLSTRTKDYIVDALALRDELHVLNEVFTDPKKLKVLHGSVSDIEWLQRD
LGLYLVNMFDTGEAARVLQFSRIGLQFLLKHYCNIDTDKAFQLADWRIRPIPENFIEYAR
KDTHYLLYIYDRMRNELLEKGESLLQTVYDKSTFMCKQRYQKPTMNEDTVMNIYRRSRYV
FDHRQMYAFREVLYWRDQIARLEDESPGYVLPQHMALDIASKLPREMQGIIACCTPVPSL
VRQHLHALHKIVLKARELPAVAGGNQAQTKEQHADTLYKMHSAFDFDNPLVCPHDDAGHG
TDDAGATNRPTLLGDLTNRMEATKPVPAINANLLKDVPDMGVLAVPKIRTIDTRGHVGLS
ESDVSEAKLTKLLALHTNHPQQDQSEDAGSENKASKYEQNKFNTPFERYLETCRLRQLKE
RNDEALQKQQNTGATSKQSTETPSADVLTLQQPNPPAPATVVVVKEEPSQKAPPQLLTQN
QLKRLEEAKERKSIAAGEKLCFNGTVIMEKPANQTPGKRKSFPMEINVSSSSYAIEQDLQ
PVAGEQKPADKLHMEPFKDQSKPAGPHNDSANWGEKPAKSKKDKQRQRNKAKSSVGQGGG
RQSSNKPVVPFDYNNVDFGRFQGGSKPLAGPRKGKRPGFAFTLADDPNEGSSGNNTNKKL
HPNSRIAKNIKKTQKMFNLSTSGGHGGGGKRK
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgaaaatgaccgataataaaaaacaaaagaaagctggcaagagcaatgcacag
gcggcggagagcaacggcatcgaaatggggtcaccatcgataaagaacgatcaagcctcc
gataatgaaggcatacgggagatgtgtgagcaaggacagaacgctatcatcgccgggatg
aaggcggcaaacgcgatgccgtcgggacggtctcgcgacctatatgcggcacatccagag
ttcatcaaaatcatggacacgcgggccaaccaggtgctgcatataatcgcgaacattttg
cagctgcagggagtacagggcaacattctgcaccgcgatccggacgagcggttagagatg
attcacgatttcaacgacaacatactggagcggatacactccaacctggatgagatggcc
ggcatacggaaggtcgtcccaaccgtgctggtccagtcggaggtgcaggtaccggtgacg
ccccgctatcggctgagcggtgcctggaacgaaaggcagaaaggcgaaccggtcaaagcc
accctcatcaccggcaccaacattgcccggccgcaggtaaagttcaaggtgccggtcgac
aattcacgcctcaacccgttcgtgccgaagatacgggataaaccgcactcgctcaaaccg
ctagccgtgctgccagagtacgacgaggcgggcaacatcgtaagctatctgcatccgtac
gagttcgagctggaccggttccagccggcaaagcacgtgttcgaacggacgacaccgcag
gaaccggtgccgctggagcgcacgcccctaatgtacgtcgaccaagagtcgcagctggcg
gagctggtgcgcgagctgcaagcggcgaaggagattgcaatcgatctcgagcaccactcg
taccgcagctaccaagggttcacctgtctgatgcagctgtccacgcgcaccaaggactac
atcgtggatgcgctagcgctgcgcgacgagctgcacgtgctgaacgaggtgtttaccgat
ccgaagaagctgaaggtgctgcacggctcggtcagcgatatcgaatggttgcagcgcgat
ctgggtctgtacctggtgaacatgttcgacaccggcgaggcggcccgcgtactgcagttc
tcgcgcatcgggctgcagtttctgctgaagcactactgcaacatcgacacggacaaagcg
ttccagctggcggactggcgcatccgcccgataccggaaaacttcatcgagtacgcgcgg
aaggacacacactatctgctgtacatttacgatcgcatgaggaacgagctgctcgagaag
ggcgaaagcttgctgcagaccgtgtacgacaagtcgacgttcatgtgcaagcagcgctac
cagaagccgaccatgaacgaggacacggtgatgaacatctatcgccggtcgcggtacgtc
ttcgaccaccggcagatgtacgcgttccgggaggtgctgtactggcgcgatcagatcgcc
cggctggaggacgaatcaccgggctacgtgctgccgcagcatatggcactggacattgct
tccaagttgccgcgcgaaatgcagggcattatagcgtgctgcacgccggtgccttctcta
gtgcggcagcatctgcatgcgctgcacaagatcgtgctgaaggcgcgcgagctgcctgcg
gtagcgggtggcaatcaggcacaaacgaaggaacagcacgcggacacgctctacaaaatg
cattcggcgttcgatttcgacaatcccttggtgtgtccgcatgacgatgcggggcacggt
acggacgatgcgggtgctaccaaccggccaacgttgctgggcgatttaaccaacaggatg
gaggcgacaaagccggtaccagcgattaacgcgaatctgctgaaagatgtccccgatatg
ggtgtattagccgtgccgaagatcagaacgatagacacccgcggacacgttggactgagt
gaaagcgacgtaagtgaggccaaacttacgaaactgctggcattgcacactaaccatccg
cagcaggatcaatcagaggatgcaggaagcgagaataaagctagtaaatacgaacagaac
aagttcaacacaccgttcgagcggtatctggagacgtgccgtttgcgtcagctaaaagaa
cgcaacgacgaagcgctacagaagcagcaaaacacgggcgccaccagtaagcaaagcacg
gaaacaccttcagccgacgttctgaccctccagcaaccgaatcccccagcaccggccacc
gttgtagtggtgaaggaagagccatcccaaaaggcaccgccccagctgctgacacaaaat
cagctcaaacggctcgaggaagcaaaggaacgcaaatcgatcgccgcaggtgagaagcta
tgcttcaacggaacggtcatcatggagaagcccgccaatcaaacgccgggcaaaagaaaa
tccttcccaatggaaattaacgtcagcagcagctcgtacgcgatcgagcaagatctgcag
ccggtggcgggtgagcagaagccggcagacaagctgcacatggaaccgttcaaggatcag
tcgaaaccggccggcccgcacaatgacagtgcgaactggggcgaaaagccggcgaaatcg
aaaaaagacaagcagcggcaacggaacaaagcgaaatcgtccgtcgggcagggcggtggg
cgccaatcgtccaacaaaccggtcgtaccgttcgattacaataacgtcgattttggccgc
ttccagggcggctcgaaaccgctcgccggaccgcgcaaagggaagcgtcccggtttcgcg
tttacgctagcggacgaccctaacgagggcagcagcggcaacaacaccaacaagaagctg
cacccgaacagccggatagcgaagaacattaaaaagacgcagaaaatgttcaacctcagc
acgagcggtgggcacggtgggggtggaaagcgcaagtaa
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