Anopheles coluzzii: 120953366
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Entry
120953366 CDS
T07312
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
acoz
Anopheles coluzzii
Pathway
acoz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acoz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
120953366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acoz03400
]
120953366
DNA repair and recombination proteins [BR:
acoz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
120953366
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
PilJ
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
120953366
NCBI-ProteinID:
XP_040229170
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Position
2:33811822..33815949
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AA seq
1199 aa
AA seq
DB search
MSKSKEKFPSSPNTLHNYFARSPASTKKPPGANPSTPTSALAAGPKAISSASSPQANSGT
PKSSKAAVKKEIESAGKEKRPTFVKKEIESAGKEKPPAFVKPDVDEGDEEPIGTQKKRRR
ILLLDDTSDNEEEDANGRNNENKPNNNNNQEGYDEQTGTKRFALLATFERPLETAETSER
QAGKGEKPLDGTDEGPVQKKIKLEALAEPHDEDPGAVLDEPTVWTHQKLDFLKPNKIKDI
HGNRPGSEKYDNRTLFVPDSYLNTLTPAMRQWWILKSKNFDCVLFFKVGKFYELYHMDAE
VGVTELGFSFMKGEFAHSGFPEAAYDRMSTTLVEKGYKVARVEQTETPDMMQERCKVERT
TSKYDKVVRREICQITVMGTEVFGQQVTITANHQPRYMLAITESGRQGMAGCRYGVCFID
TSIGLFHLGEFDDDNQQSRLLTFLSHYPPVLVLHERTTPSEGMQRIFKTLLANVKREALT
TGTQLWTGEKTLKYLAETVYGGSSSEGSKWPATLRTMLDETDSLGLTPKESYQLALKALG
GCVWYLQRCLLDQQVLSLATFEEYVPLDENREATETITKRIDDAARAKRFMVLDSITLNN
LKIVGSEGSLVDRMDHCCSKFGKRLLYNWVCAPSCIKEEILQRQEAVTELIENVDLLQDV
RQILGQLPDMERHLAQIHGFGLALRDHPARRAILYEEHVYGKKKMRDFIATLKGFQSLLP
LPQMFASVHSQLLVRLTQKANSNPAGAFPSMEKQIEFFESSFDHEKALKSGSIVPEKGLD
TEYDAIEQEIKDLNGELEAYLAEQSKFFGCTVKYFGNDKKRFQLEVPEGRAKKATGDYTL
EGTKTGKNATKRFHTEETRRFLKQMMLLEDRRKSVLKDLARRIFERFSRDYDMWKGCIEL
VATLDVLTSLAEYARTEGLSCVPVLLSKDETIGGKSFIEIEEGIHPCLSSEAAENFIPNG
TAIGGDGKANLVLLTGPNMGGKSTLMRQVGLLAVLAQIGSRLPAEACRMTLIDRIFTRLG
ASDDIMAGHSTFLVELNETSAILKHATADSLVLLDELGRGTATYDGTAVAGAVVHFLADL
KCRTMFSTHYHNLVDSFHEDPRIALGHMACMVENEEGDDPTQETVTFLYRYTDGACPKSY
GFNAAKLAGMPTAIIKRAYELSKTVEKEALKRKILMKLLKQAPQNEIKDLVVKLKSFQF
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaagcaaggaaaagtttcccagctccccaaacacactgcacaactactttgcc
cgttcgccggccagtacgaagaaacccccgggcgccaatccatcaacccctacgagtgcg
cttgccgctgggccaaaagcaatctcctccgcctcctcccctcaagccaacagcggtaca
ccgaaaagctcgaaagcagccgtaaagaaggaaatcgaatcagctggcaaagaaaagcgt
cccaccttcgtaaagaaggaaatcgaatcagcaggcaaagaaaagccccccgccttcgta
aagccggacgtcgacgagggagacgaagagccgatcggaacgcaaaagaagcgtcgccgt
atcctgctgctggacgatacatccgacaacgaggaggaggatgcaaacggtcgcaacaac
gagaacaaaccgaacaacaataacaaccaggaagggtacgatgagcagacggggacgaag
cggttcgcgctgcttgcgacctttgagcggccattagaaacggctgaaacgagcgaaagg
caggcaggcaagggggagaaaccgctcgacggaacggacgagggaccggtgcagaaaaag
atcaagctggaagcgctcgccgaaccgcacgacgaggaccccggagccgtgctggacgag
ccgaccgtttggacgcaccagaagctggactttttgaagcccaacaaaatcaaggacatt
cacggcaaccggccgggcagtgagaagtacgacaacagaacgctgtttgtgcccgattcc
tatctcaacacgctcacaccggccatgcgacagtggtggatcttgaagagcaaaaacttc
gactgtgtgctgttcttcaaggtgggtaagttttacgagctgtaccacatggacgccgag
gtgggtgtgaccgagctcgggttcagcttcatgaagggagagttcgcgcactccggcttt
cccgaggcggcgtacgaccgcatgtcgaccacgctggtggagaagggctacaaggtggcg
cgggtcgagcagaccgaaacgccggacatgatgcaggagcggtgcaaggtcgaacgcacg
accagcaagtacgacaaggtcgtgcggcgcgagatttgccagatcaccgtcatgggcacg
gaggtgttcgggcagcaggttaccatcacggccaaccatcagccgcggtacatgctggcc
atcacggagagtggccgccaggggatggcgggctgtcggtacggcgtttgctttatcgac
acctcgatcggactgttccatctcggcgagtttgacgacgataatcagcagtcccggctg
cttacgttcctgtcgcactatccgccggtgctggtactgcacgagcgaaccacgccgtcc
gagggaatgcagcgcatcttcaaaacattgctagcgaacgtcaagcgggaagccctcact
accgggacacagctttggacgggcgagaaaacgctcaagtatctggcggaaaccgtctac
gggggctcgtcgagcgaagggtccaaatggccagcaacgttgcgcaccatgctggacgag
acggacagtttgggattgacgccgaaggaatcgtatcagctcgcgctgaaagcactgggc
gggtgcgtctggtatttgcagcgatgcctgctagatcagcaggtcctgtcccttgccacc
ttcgaggagtacgtaccgttggatgagaatagagaggcaacggagacgatcacaaagcgg
atagatgatgctgcaagagccaaacggttcatggtgctggattcgatcacgctaaacaac
ctgaagatcgtcggttcggaaggctcgctggtggaccggatggaccactgctgcagcaag
tttggcaagcgactgctgtacaactgggtgtgtgcgccgagctgcataaaggaggagatc
ctgcagcgacaggaagccgtgaccgagctgatcgagaacgtggacttgctgcaggatgtg
cgtcagatactggggcaactgccggacatggaacggcatttggcgcagattcatggcttt
gggctcgcgctccgcgaccatcccgcccgacgggccatcctgtacgaagagcacgtgtac
ggcaagaagaagatgcgcgatttcatcgccacgctcaaagggttccaatcgctgctccca
ctgcctcaaatgtttgccagcgtacactcgcagctgctcgttcgcctcacacagaaagct
aactccaacccggccggtgccttcccatcgatggagaagcagatcgaattcttcgaaagc
tcgttcgaccacgagaaggcactcaagagcggcagcatcgtgccggagaaagggctcgac
acggagtacgatgcgatcgagcaggagatcaaagatttgaacggcgagctggaggcgtat
ctggcggagcagagcaaattctttggctgtaccgtcaagtacttcggcaacgacaagaag
cgcttccagctggaggtgccggagggcagggcgaagaaggccaccggcgactacacgctc
gagggcaccaagacgggcaagaacgcgacgaagcggttccacacggaggagacgcgtcgc
ttcctgaagcagatgatgctgctcgaggatcgccgaaaatcggtgctgaaagatctggcg
cgacgaatctttgagcgattttcgcgcgactacgacatgtggaagggctgcatcgagctg
gtggccacgctcgacgtgctgacgtcgctggcggagtacgcccgcaccgagggcctctcg
tgcgtgccggtgctgctgagcaaggacgaaacgatcgggggcaaatcgttcatcgagatc
gaggaaggcatccatccgtgcctgtcgagcgaggcggccgaaaatttcatccccaacggt
acggctatcgggggcgacgggaaggcgaacctggtgctgctcaccggcccgaacatgggc
ggcaagagtacgctcatgcggcaggtgggtttgctggccgtgctggcccagattggatcg
cgcttgccggccgaagcctgccgcatgacgctgatcgatcgcatcttcacgcggctcggc
gcgagcgatgacattatggccggccacagcactttcctggtggagctgaacgaaacgtcc
gccatcctgaagcatgccaccgccgacagtctggtgctgctggacgagctgggccggggc
acggcaacgtacgacgggacggccgtggccggtgcggtcgtccactttctggccgatctc
aagtgtcgcaccatgttctcgacccactatcacaacctggtggacagcttccacgaggat
ccacgcatcgcactggggcacatggcctgcatggtggaaaacgaagagggtgatgatccc
acgcaagagacggtcacgttcctgtatcgctacaccgatggggcatgcccgaaatcgtac
ggattcaatgcagccaagctggcgggaatgcccacagccatcatcaagcgtgcgtacgag
ctctctaaaactgtcgaaaaggaagcgctcaagcgcaagatactgatgaagctactcaag
caagcgccacaaaacgagatcaaggatctggtggtgaagcttaaatcattccagttttaa
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integrated database retrieval system
