Anopheles coluzzii: 120955284
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Entry
120955284 CDS
T07312
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
acoz
Anopheles coluzzii
Pathway
acoz04382
Cornified envelope formation
acoz04512
ECM-receptor interaction
acoz04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acoz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120955284
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120955284
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120955284
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acoz04147
]
120955284
00536 Glycosaminoglycan binding proteins [BR:
acoz00536
]
120955284
Exosome [BR:
acoz04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
120955284
Glycosaminoglycan binding proteins [BR:
acoz00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120955284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
120955284
NCBI-ProteinID:
XP_040231938
UniProt:
A0A6E8VX98
LinkDB
All DBs
Position
3:complement(28202854..28215005)
Genome browser
AA seq
1778 aa
AA seq
DB search
MGTRIKWLVTTSLVVWFGQQTYAQFWASSNNNDNSGVGLFKRQEQEYPRQLAPQIDPSYS
IMDTASGPQGPPGKNCTSGGCCLPKCFAEKGNRGLPGPMGLKGAKGVRGFPGSEGLPGEK
GTKGEPGPVGLQGPKGDRGRDGLPGYPGIPGTNGVPGVPGAPGLAGRDGCNGTDGLPGLS
GLPGNPGPRGYAGIPGTKGEKGEPARHPENYNKGQKGEPGNDGLEGLPGPQGEVGPRGFP
GRPGEKGVPGTPGVRGERGDKGVCIKGEKGQKGAKGEEVYGATGTTTTTGPKGEKGDRGE
PGEPGRSGEKGQAGDRGQVGERGHKGEKGLPGQPGPRGRDGNFGPVGLPGQKGDRGSEGL
HGLKGQSGPKGEPGRDGIPGQPGIAGPAGAPGGGEGRPGAPGPKGPRGYEGPQGPKGMDG
FDGEKGERGQMGPKGGQGVPGRPGPEGMPGDKGDKGESGSVGMPGPQGPRGYPGQPGPEG
LRGEPGQPGYGIPGQKGNAGMAGFPGLKGQKGERGFKGVMGTPGDAKEGRPGAPGLPGRD
GEKGEPGRPGLPGAKGERGLKGELGGRCTDCRPGMKGDKGERGYAGEPGRPGASGVPGER
GYPGMPGEDGTPGLRGEPGPKGEPGLLGPPGPSGEPGRDAEIPMDQLKPIKGDKGEKGEN
GLMGIKGEKGFPGPVGPEGKMGLRGMKGDKGRPGEAGIDGAPGAPGKDGLPGRHGQTVKG
EPGLKGNVGYSGDKGDKGYSGLKGEPGRCASIPPNLEEAIRGPPGTQGEKGAPGIQGIRG
DKGEMGEQGRTGMQGNAGPPGAPGPVGPRGLTGLRGEKGNTGPLGPPGAPGRDGMPGAPG
LPGSKGGKGDPGLSMVGPPGPKGNPGLRGPKGDRGGMGDRGDPGQPGSVGYPGEKGDLGI
PGQPGFPGEVGPKGEPGPKGPAGHPGAPGRPGMDGVKGLAGLKGDVGAPGVIGLPGQKGE
MGQAGNDGLKGFQGRKGMMGAPGIQGVRGPQGAKGEPGEKGDRGEIGMKGLMGQTGPPGM
LGPKGDKGLAGLPGPACLPGLSGEKGDKGYTGPEGPPGEPGAASEKGQKGEPGVPGLRGN
DGLPGLEGPSGPKGDAGVPGYGRPGPQGEKGDVGLTGINGLPGLNGVKGDMGVPGFPGVK
GDKGTTGLPGVPGAPCMDGLPGAEGPAGPRGYDGEKGFKGEPGRIGERGELGEKGDQGLM
GPVGLMGRKGDRGVPGSPGLPATAAAIKGDKGEPGFPGAIGRPGKVGAPGLPGDMGTKGE
MGIQGLPGLPGPAGLNGLPGMKGDMGPMGEKGDSCPVVKGEKGLPGRPGKMGRDGPPGLL
GEKGDKGLSGLPGPMGPPGPPGPLGRQGEKGDRGDSGLMGRPGKDGLPGPQGQRGLPGPQ
GEKGDQGPPGFIGPKGERGERGRDGMNGLNGPQGLKGDRGMPGLEGVAGLPGMVGEKGDR
GLPGMAGLNGAPGEKGQKGETPQLPPQRKGPPGPPGFNGPKGDKGMPGLAGPAGIPGAPG
APGEMGLRGFEGARGLQGLRGDVGPEGRPGRDGAPGLPGPKGEPGRDCESAPYYTGILLV
RHSQSDEVPMCEPGHLKLWDGYSLLYVDGNDYPHNQDLGSAGSCVRKFSTLPVLACGQNN
ICNYASRNDRTFWLSTSAPIPMMPVTENEMRPYISRCTVCEAPTNVIAVHSQTLHIPECP
NGWDGLWIGYSFLMHTAVGHGGGGQSLSGPGSCLEDFRATPFIECNGGKGHCHYYETQTS
FWLVSLEDHQQFQRPEQQTLKAGNLLSRVSRCQVCIRR
NT seq
5337 nt
NT seq
+upstream
nt +downstream
nt
atggggacccgaataaaatggttagtcactacctcgctggtagtttggttcggacaacag
acgtacgcgcaattctgggcgtccagcaacaacaatgacaactccggcgtcggactgttt
aagcgacaggagcaggaatatccacgacagctagcgccacagatcgacccgagctacagc
ataatggacacggccagcggaccacagggaccaccgggcaagaactgcacctccggcggc
tgctgcttgccgaaatgtttcgctgagaagggcaaccgcggcctgcccggaccgatgggg
ctgaagggtgcgaagggtgtgcgcgggttccccgggtcggagggtttgccgggcgagaag
ggcaccaagggcgagccgggcccggtcgggctgcagggcccgaagggcgaccggggccgg
gacggtttgcccggctacccgggcatccccggcacgaacggtgtgccgggtgtgccggga
gcacccggtctggccggtcgggacggttgcaacggcacggacggtctgcccggtttgtcc
gggctgccgggaaatccgggcccccgcggttacgccggcatccccggcacgaagggcgag
aagggtgagccggcgcggcatccggagaactacaacaagggccagaagggtgagccgggc
aacgatggactggaaggactgccggggccgcagggcgaggtaggcccgcgcggtttcccc
ggccgacccggcgaaaagggtgtccccggtacgcccggtgtgcggggcgagcgaggcgac
aaaggcgtgtgcatcaagggcgagaagggccagaagggcgcgaagggcgaggaggtgtac
ggcgccacgggcacgacgacgacgaccggaccgaagggcgagaagggcgaccgcggcgag
ccgggcgaaccgggccgatccggcgagaagggacaggccggcgaccgggggcaggtgggc
gagcgaggccacaagggcgagaagggtttgcctggacagccgggcccgcgagggcgcgac
ggtaactttggaccggtgggcctgcccggccagaagggtgaccgcggctcggaaggactg
cacggactgaagggccagagcggaccgaagggtgagccgggccgggacggcattccgggc
cagcccggtattgctgggccggccggtgcgcccggcggcggcgaaggacgacccggcgcg
cccggtccgaagggaccgcgcggctacgaaggaccgcagggcccgaagggcatggacgga
ttcgacggagaaaagggcgagcggggacagatgggcccgaagggcggccagggtgtgcct
ggccggcccggtcccgaaggtatgccgggcgacaagggcgacaaaggcgagtcgggatcg
gtcggtatgccggggccgcagggcccgcgcggctaccctggccagcccggacccgagggt
ctgcgcggtgagccgggtcagccgggctatggcattcccggacagaagggtaacgccggt
atggctggattccccggactgaagggacagaaaggcgagcgtggcttcaagggtgtgatg
ggtacgcccggtgacgcaaaggaaggacgcccgggagcgccaggactaccaggacgtgat
ggcgaaaagggcgaacccggccgtccgggactccccggagcgaagggcgagcgcggtctt
aagggagagctcggtggacgctgtacggactgccggcccggaatgaagggcgacaaaggc
gaacgcggttatgccggcgaaccaggccgcccgggagcgagcggtgtgccaggcgaacga
ggataccccggtatgccgggcgaggacggaacaccaggactgcgcggagaaccaggcccc
aagggagagccgggtctgctcggtccccctggcccatcgggagagccgggtcgcgatgcc
gaaattccaatggaccagctgaaacccatcaagggcgacaagggcgaaaagggggaaaat
ggcctgatgggcatcaagggcgagaaaggattccccggaccggtcggaccggagggcaag
atgggactgcgcggcatgaagggcgacaagggacgaccgggcgaggcgggcattgacgga
gcgcccggcgcgccgggcaaggacggtctgcccggccggcacggacaaacggtcaagggt
gaaccggggctgaagggtaacgtaggctactcgggcgacaagggcgacaagggctactcc
gggctgaagggtgagccgggccggtgcgccagcattccaccgaacctggaggaagcgatc
cgtggaccaccaggcacacagggcgagaagggcgcccccggcattcagggaattcgcggc
gacaagggcgaaatgggcgaacagggacggacgggcatgcagggtaatgctgggccgccg
ggagcacccgggccggtaggaccgcgcggactgacgggactgcggggcgaaaagggtaat
acgggaccgctgggaccaccgggtgcgcctggccgcgacggtatgcccggagcaccggga
ctgcccggctcgaagggtggcaagggtgatccgggtctgtcgatggtgggtccgcccggc
ccgaagggtaacccgggcctgcgaggaccgaagggtgatcggggcggcatgggcgatcgg
ggcgatccgggacaacccggctccgtgggctatccgggcgaaaagggcgatttgggcatt
ccgggacagcctggcttcccgggcgaagtgggaccgaagggtgagccggggccgaaggga
ccggcgggacacccgggcgcaccgggccggcccggtatggacggtgtgaagggtttggcc
ggtctgaagggagacgttggcgcaccgggcgtgatcggcctgcccggccagaagggcgaa
atgggccaggcgggtaacgacgggctgaagggattccaaggtcgtaagggaatgatggga
gcgccgggcattcagggcgtacgaggaccacagggcgcgaagggcgaaccaggcgaaaag
ggcgatcggggcgaaatcggcatgaagggactgatgggtcagacgggcccgcccggtatg
ctcggaccgaagggagacaagggtctggccgggctgccgggaccggcctgtctgcccgga
ctgtcgggcgaaaagggcgacaagggatacactggaccggagggaccgccgggcgaaccg
ggtgccgcgtcggagaagggccagaagggtgagccgggcgtaccgggactacgcggtaac
gacggactgcccgggctggagggaccgtccggaccgaagggtgatgcgggcgtgcccggc
tacggtcgacctgggccgcagggcgaaaagggtgacgttggcctgacgggcatcaatggg
ctgccgggcttgaacggggtgaagggcgacatgggcgtccctggattcccgggcgtgaag
ggcgacaagggtacgaccggattgccgggtgtgcctggtgcaccgtgcatggacggactg
cccggagcggaaggtcccgctggtccgcgcggatacgacggcgagaagggcttcaagggc
gaaccgggccgcatcggcgagcggggcgaacttggcgaaaagggtgaccagggactaatg
ggaccggtggggctgatgggacgcaagggcgaccgtggtgtgccgggttcgcccggtctg
ccagctacggcggccgccatcaagggcgacaagggtgaaccgggcttcccgggtgcgatc
ggacgcccgggcaaggtcggtgcgccgggcctgccgggcgacatgggcaccaagggcgag
atgggcatccaggggctgcccggactgcccggaccggccggactgaacgggctgccgggc
atgaagggcgacatgggaccgatgggcgaaaagggcgactcctgtccggtggtgaagggc
gaaaagggtctgccgggccggccgggcaagatgggccgcgacgggccgcccggcctgctg
ggcgaaaagggcgacaaaggactgtctggcctgcccggaccgatgggaccgcccggaccg
cccggcccgcttggccggcagggcgaaaagggtgaccgaggcgattccggtttgatgggc
cgccccggcaaggacggactgcccggaccgcagggccagcgagggctgccgggaccgcag
ggcgaaaagggcgaccaggggccgccagggtttatcggaccgaagggcgagcggggcgaa
cggggccgggacggaatgaacgggctgaacgggccgcagggactgaagggtgaccggggc
atgccgggactggagggcgtggccggtctgcccggtatggtgggcgagaagggtgaccgc
ggtctgcccggtatggccggcctgaacggtgcgccgggcgagaagggccagaagggtgag
acaccacagctgcccccgcagcgcaagggaccgcccggaccgcccggattcaacggaccg
aagggtgacaagggcatgccagggttggccggaccggccggcattccgggcgctcccggt
gcgccgggcgagatgggactgcgcggattcgagggcgcgcgcggcctgcagggactgcgc
ggtgacgttggacccgagggacggcccggacgcgacggtgcgccgggtctgcccgggccg
aagggtgagccgggccgggactgcgagtcggcaccgtactacaccggcatcctgctggtg
cggcacagccagtcggacgaggtgccgatgtgcgagccgggccatctgaagctgtgggac
ggctactcgctgctgtacgtcgacggcaatgactacccgcacaaccaggacctcggttcg
gccggttcctgcgtgcgcaagttctccacgctgcccgtgttggcctgcggacagaacaac
atctgcaactacgcgtcccgcaacgatcggacattctggctgtcgacgtccgcgccgatt
ccgatgatgccggtgaccgagaacgagatgcgcccgtacatctcgcggtgcacggtctgt
gaggcaccgaccaacgtgatcgcggtgcacagccagacgctccatattccggaatgtccg
aacggatgggacggtctatggattggctacagtttcctaatgcacactgccgtcggccac
ggtggcggtggccagtcactgtccgggccgggctcgtgcctggaggacttccgcgccaca
ccgttcattgagtgtaacggtggcaagggccactgccattactacgaaacgcaaacctcc
ttctggctggtttcgctcgaggaccaccagcagttccagcggccggagcagcaaacgctc
aaggccggcaacctgcttagccgagtatctcggtgccaggtgtgcatccgccgctga
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