Anopheles coluzzii: 120955736
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Entry
120955736 CDS
T07312
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
acoz
Anopheles coluzzii
Pathway
acoz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acoz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120955736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoz03019
]
120955736
Messenger RNA biogenesis [BR:
acoz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120955736
mRNA degradation factors
5'-3' decay
Decapping complex
120955736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAT1
TFIIA
Motif
Other DBs
NCBI-GeneID:
120955736
NCBI-ProteinID:
XP_040232784
UniProt:
A0A6E8W0B9
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All DBs
Position
3:36434014..36438162
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AA seq
1036 aa
AA seq
DB search
MDSFFGFDTSLPGENDEEEEEEEEARRFFQAAPRRTAELHSPLQRRRCKEDISDEEEYDA
LNDETFGAADKGDWEDIHEHLVRLESGRNGGRTGSFLGEDEDDGGSSSVDLLFDDYELDL
QLSKLNLFYSNNNHGNSNNNNNSESGRSSVVAQSIGDEFASKLRLDPSIWGSPAKVPAPV
QPPYSEYRPSGTPFSALPPQQSAFRPPEPAHPIGGGGLPPKPPPSLPPGLFPPMKMLSVE
DIERTIIQHQHQQNQHQSMLQKQMSQQQQQQQQQHQLHYHHNQFHQHQQQQTLQPFRTPA
PVPAQPPAPVKAREHFTPAKEVKSMQPPIPMISSPVAAPPLRVPPALLTPPPSLLGARNA
GPAALFPPGPSQPTPPAPPPPMLNNANRLPLGLLPYNMLAARPYSTPINNLAMHPAFPQR
CSYGSPLQGFLGGPGPVQMGPPPPLPPRHPGPAPGGPPPFLMQRSPTPLPTNQFNQRLVQ
EIQQNHPLLAFNRQLAAASTLSVCGNGVNKAAPLVALPRAGFMKQQHHFQQQQQQRSRVG
NGMPSSTAGGGQPEERDEYANMMSNRDKQWLIGIQLTQLNSDAPYFNDYYFTVYKQRLAA
AKGEGDNRIYRENQLNHPFTQPKEHAQLLLLSLLSKNGKSGLLGTNRERRSSESRSNPNG
GSEGKDGSAPAGGGRAYTPLQFQNSLGKLQCGSVIAPRKLIDADVMGSDQLNGNGVPALE
PPPAAIQRKARHVLLLIETLYKLVLKLEDLGNPVAIEAMKALREKKMRERTSSTGSGSGV
ACLPEAGAKIGSNDGSTIASLSSDSAPSEPLEPEESYDELAGSLVAQLSQDKITSILGVR
KGRILLRRSLAVLHEHPGRWMLWGMIFVALPSLPRKDRDDADGLLLTLFGEFERQLRYGT
IKELLLVAKTIGTAGKVMQCIVSSKFLLSCIITIIFQMEMFCGKNPSALLKASEDGWWVS
FLGDVNRIVKESVGPIRSSSITINPDNNIVRTLIVHFARFGTRVDGTELLNFITDNGNGK
PKSGRKQSLQEPGVAK
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggattcctttttcggcttcgataccagtctgccgggtgagaacgacgaggaggaggag
gaggaggaggaagctcgccgattcttccaggcagcaccgcggcgcaccgccgaactgcat
tcgccgctgcagcggcgccgatgcaaagaagacatctcggatgaggaagagtatgacgcc
ctgaatgacgaaacgttcggtgcggcggacaagggcgactgggaggacatccacgagcat
ctcgtgcggctggaaagtggcaggaatggggggcgaaccggttccttccttggagaggat
gaggacgacgggggcagcagcagtgtcgatctgctgtttgacgactacgagctggatctg
cagctatcgaagcttaatctcttctatagcaacaacaatcacggcaacagcaacaacaac
aacaacagcgagagcggccgtagcagtgtggtagcccaaagcattggcgatgagttcgcg
agcaagctacggctggatccgagcatctggggcagcccggcgaaggtaccggctccggtg
cagccaccgtacagcgagtatagacccagcggtacgccattttctgccctgccaccacag
cagagcgcctttcgaccaccggaaccagcgcatccgatcgggggaggtggcctgccgcca
aaaccgcctccctcactgccaccgggcttgtttccacccatgaagatgctgtcagtggag
gacattgaacgaaccatcatccagcatcagcatcagcaaaatcagcatcaaagtatgctg
caaaagcaaatgtcacagcagcagcagcagcaacaacaacaacaccaactccattaccat
cacaaccaatttcaccagcaccagcagcagcagacactgcaaccattccgcacaccggca
ccggtcccggcccaaccaccagcaccagtgaaagctcgcgaacatttcacacccgccaag
gaggtaaagagtatgcagccgccgatcccgatgatctcctcgccagtagcagcaccaccg
ttacgggtaccaccggcgctgctcaccccgccgccctcgctgctgggcgcccgaaacgcc
ggtcccgctgccctgttcccgcctggaccgtcgcagccaacaccgccggcacctccgcct
cccatgctgaacaacgcgaaccgtcttccgcttggtttgctgccgtacaacatgctagcc
gcccgaccatactcgacgccaatcaacaacctggcgatgcatccagcattcccgcagcgc
tgctcgtacggttccccgctgcaagggtttctgggtggccccggccccgtacagatgggt
ccgccaccgccgctacctccccgccatccgggaccagcgccgggtgggccgccgcccttt
ttgatgcagcgcagcccgacgcccctgccgacgaaccagttcaaccagcggctggtgcag
gaaattcaacaaaaccatccgctgctcgcgttcaacagacagctcgctgcggccagcacg
ctcagcgtttgcggcaatggcgtgaacaaagcagccccgctagtagccctgccaagggcg
ggttttatgaagcagcagcaccatttccagcagcagcagcagcaacgatcccgagtaggc
aatggaatgccatcgagcactgcaggcggcgggcagccagaggagcgcgatgagtacgca
aacatgatgagcaatcgcgacaagcagtggctaatcgggatacagctgacgcagctcaac
tcggacgcgccctactttaacgattactatttcaccgtgtacaagcagcggctggcagcg
gcgaagggcgagggcgataatcggatctatcgcgaaaatcagctcaaccatccgttcacc
cagccgaaggagcatgcgcagctgctgttactatcgctgctgtcgaaaaacggcaagagc
ggactgctcggcacgaaccgggaacgtcgcagttccgaatcccgctcgaacccgaacggc
ggtagcgagggaaaggatggctcagcgccggcgggtggtggtcgagcgtataccccgctc
cagtttcaaaattcgctcggcaagctgcagtgcggtagtgtgatagcgccgcgaaagctc
atcgacgccgacgtgatgggcagcgaccagctgaacggaaatggcgtgccggcacttgaa
ccgccgcccgccgctatccagcgcaaagctcgccatgtgctgctgctcatcgagacgctg
tacaagctggtgctcaagctggaagatctcggcaatcccgttgcgatcgaagcgatgaaa
gcgctgcgcgaaaagaaaatgcgcgagcgaaccagcagcaccggcagcggcagcggtgtg
gcgtgtttgccagaagcgggcgccaagattggttcaaacgacggttccacgattgcgtcg
ctatcgagcgattccgcgccgagtgagccgctcgagccggaagagtcgtacgacgagctg
gccgggtcgctcgtagcgcagctttcgcaggacaaaatcacctccatactgggcgtgcgc
aaggggcgcatactgctgcgccgctcgttggccgtcctgcacgagcatccgggccggtgg
atgctgtggggcatgatcttcgtcgcgctgccctccctgccgcggaaggatcgggacgat
gcggacgggctgctgctgacgctgttcggtgagttcgagcgccagctgcggtacggcacg
atcaaggagctgctgctggtggcgaaaacgatcggcactgccggcaaggtgatgcagtgc
atcgtcagcagcaagttcctgctctcctgcatcatcacgatcatctttcagatggagatg
ttctgtggaaagaacccgtccgcgctgctgaaagcttccgaggatggctggtgggtatcg
ttcctcggggacgtgaatcgcattgtgaaggaaagcgtgggaccgatccgcagcagcagc
attacgatcaacccggacaacaacattgtccgtactctgatcgtgcactttgcgcggttc
ggcacgcgggtcgatgggacggagctgctgaacttcattaccgacaatgggaacggcaag
cccaagtcgggtaggaaacagtcactgcaagagccaggcgttgccaagtga
DBGET
integrated database retrieval system