KEGG   Anopheles coluzzii: 120955736
Entry
120955736         CDS       T07312                                 
Name
(RefSeq) protein PAT1 homolog 1
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
acoz  Anopheles coluzzii
Pathway
acoz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:acoz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    120955736
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acoz03019]
    120955736
Messenger RNA biogenesis [BR:acoz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     120955736
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     120955736
SSDB
Motif
Pfam: PAT1 TFIIA
Other DBs
NCBI-GeneID: 120955736
NCBI-ProteinID: XP_040232784
UniProt: A0A6E8W0B9
LinkDB
Position
3:36434014..36438162
AA seq 1036 aa
MDSFFGFDTSLPGENDEEEEEEEEARRFFQAAPRRTAELHSPLQRRRCKEDISDEEEYDA
LNDETFGAADKGDWEDIHEHLVRLESGRNGGRTGSFLGEDEDDGGSSSVDLLFDDYELDL
QLSKLNLFYSNNNHGNSNNNNNSESGRSSVVAQSIGDEFASKLRLDPSIWGSPAKVPAPV
QPPYSEYRPSGTPFSALPPQQSAFRPPEPAHPIGGGGLPPKPPPSLPPGLFPPMKMLSVE
DIERTIIQHQHQQNQHQSMLQKQMSQQQQQQQQQHQLHYHHNQFHQHQQQQTLQPFRTPA
PVPAQPPAPVKAREHFTPAKEVKSMQPPIPMISSPVAAPPLRVPPALLTPPPSLLGARNA
GPAALFPPGPSQPTPPAPPPPMLNNANRLPLGLLPYNMLAARPYSTPINNLAMHPAFPQR
CSYGSPLQGFLGGPGPVQMGPPPPLPPRHPGPAPGGPPPFLMQRSPTPLPTNQFNQRLVQ
EIQQNHPLLAFNRQLAAASTLSVCGNGVNKAAPLVALPRAGFMKQQHHFQQQQQQRSRVG
NGMPSSTAGGGQPEERDEYANMMSNRDKQWLIGIQLTQLNSDAPYFNDYYFTVYKQRLAA
AKGEGDNRIYRENQLNHPFTQPKEHAQLLLLSLLSKNGKSGLLGTNRERRSSESRSNPNG
GSEGKDGSAPAGGGRAYTPLQFQNSLGKLQCGSVIAPRKLIDADVMGSDQLNGNGVPALE
PPPAAIQRKARHVLLLIETLYKLVLKLEDLGNPVAIEAMKALREKKMRERTSSTGSGSGV
ACLPEAGAKIGSNDGSTIASLSSDSAPSEPLEPEESYDELAGSLVAQLSQDKITSILGVR
KGRILLRRSLAVLHEHPGRWMLWGMIFVALPSLPRKDRDDADGLLLTLFGEFERQLRYGT
IKELLLVAKTIGTAGKVMQCIVSSKFLLSCIITIIFQMEMFCGKNPSALLKASEDGWWVS
FLGDVNRIVKESVGPIRSSSITINPDNNIVRTLIVHFARFGTRVDGTELLNFITDNGNGK
PKSGRKQSLQEPGVAK
NT seq 3111 nt   +upstreamnt  +downstreamnt
atggattcctttttcggcttcgataccagtctgccgggtgagaacgacgaggaggaggag
gaggaggaggaagctcgccgattcttccaggcagcaccgcggcgcaccgccgaactgcat
tcgccgctgcagcggcgccgatgcaaagaagacatctcggatgaggaagagtatgacgcc
ctgaatgacgaaacgttcggtgcggcggacaagggcgactgggaggacatccacgagcat
ctcgtgcggctggaaagtggcaggaatggggggcgaaccggttccttccttggagaggat
gaggacgacgggggcagcagcagtgtcgatctgctgtttgacgactacgagctggatctg
cagctatcgaagcttaatctcttctatagcaacaacaatcacggcaacagcaacaacaac
aacaacagcgagagcggccgtagcagtgtggtagcccaaagcattggcgatgagttcgcg
agcaagctacggctggatccgagcatctggggcagcccggcgaaggtaccggctccggtg
cagccaccgtacagcgagtatagacccagcggtacgccattttctgccctgccaccacag
cagagcgcctttcgaccaccggaaccagcgcatccgatcgggggaggtggcctgccgcca
aaaccgcctccctcactgccaccgggcttgtttccacccatgaagatgctgtcagtggag
gacattgaacgaaccatcatccagcatcagcatcagcaaaatcagcatcaaagtatgctg
caaaagcaaatgtcacagcagcagcagcagcaacaacaacaacaccaactccattaccat
cacaaccaatttcaccagcaccagcagcagcagacactgcaaccattccgcacaccggca
ccggtcccggcccaaccaccagcaccagtgaaagctcgcgaacatttcacacccgccaag
gaggtaaagagtatgcagccgccgatcccgatgatctcctcgccagtagcagcaccaccg
ttacgggtaccaccggcgctgctcaccccgccgccctcgctgctgggcgcccgaaacgcc
ggtcccgctgccctgttcccgcctggaccgtcgcagccaacaccgccggcacctccgcct
cccatgctgaacaacgcgaaccgtcttccgcttggtttgctgccgtacaacatgctagcc
gcccgaccatactcgacgccaatcaacaacctggcgatgcatccagcattcccgcagcgc
tgctcgtacggttccccgctgcaagggtttctgggtggccccggccccgtacagatgggt
ccgccaccgccgctacctccccgccatccgggaccagcgccgggtgggccgccgcccttt
ttgatgcagcgcagcccgacgcccctgccgacgaaccagttcaaccagcggctggtgcag
gaaattcaacaaaaccatccgctgctcgcgttcaacagacagctcgctgcggccagcacg
ctcagcgtttgcggcaatggcgtgaacaaagcagccccgctagtagccctgccaagggcg
ggttttatgaagcagcagcaccatttccagcagcagcagcagcaacgatcccgagtaggc
aatggaatgccatcgagcactgcaggcggcgggcagccagaggagcgcgatgagtacgca
aacatgatgagcaatcgcgacaagcagtggctaatcgggatacagctgacgcagctcaac
tcggacgcgccctactttaacgattactatttcaccgtgtacaagcagcggctggcagcg
gcgaagggcgagggcgataatcggatctatcgcgaaaatcagctcaaccatccgttcacc
cagccgaaggagcatgcgcagctgctgttactatcgctgctgtcgaaaaacggcaagagc
ggactgctcggcacgaaccgggaacgtcgcagttccgaatcccgctcgaacccgaacggc
ggtagcgagggaaaggatggctcagcgccggcgggtggtggtcgagcgtataccccgctc
cagtttcaaaattcgctcggcaagctgcagtgcggtagtgtgatagcgccgcgaaagctc
atcgacgccgacgtgatgggcagcgaccagctgaacggaaatggcgtgccggcacttgaa
ccgccgcccgccgctatccagcgcaaagctcgccatgtgctgctgctcatcgagacgctg
tacaagctggtgctcaagctggaagatctcggcaatcccgttgcgatcgaagcgatgaaa
gcgctgcgcgaaaagaaaatgcgcgagcgaaccagcagcaccggcagcggcagcggtgtg
gcgtgtttgccagaagcgggcgccaagattggttcaaacgacggttccacgattgcgtcg
ctatcgagcgattccgcgccgagtgagccgctcgagccggaagagtcgtacgacgagctg
gccgggtcgctcgtagcgcagctttcgcaggacaaaatcacctccatactgggcgtgcgc
aaggggcgcatactgctgcgccgctcgttggccgtcctgcacgagcatccgggccggtgg
atgctgtggggcatgatcttcgtcgcgctgccctccctgccgcggaaggatcgggacgat
gcggacgggctgctgctgacgctgttcggtgagttcgagcgccagctgcggtacggcacg
atcaaggagctgctgctggtggcgaaaacgatcggcactgccggcaaggtgatgcagtgc
atcgtcagcagcaagttcctgctctcctgcatcatcacgatcatctttcagatggagatg
ttctgtggaaagaacccgtccgcgctgctgaaagcttccgaggatggctggtgggtatcg
ttcctcggggacgtgaatcgcattgtgaaggaaagcgtgggaccgatccgcagcagcagc
attacgatcaacccggacaacaacattgtccgtactctgatcgtgcactttgcgcggttc
ggcacgcgggtcgatgggacggagctgctgaacttcattaccgacaatgggaacggcaag
cccaagtcgggtaggaaacagtcactgcaagagccaggcgttgccaagtga

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