Anopheles coluzzii: 120955903
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Entry
120955903 CDS
T07312
Name
(RefSeq) intraflagellar transport protein 140 homolog
KO
K19672
intraflagellar transport protein 140
Organism
acoz
Anopheles coluzzii
Brite
KEGG Orthology (KO) [BR:
acoz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
acoz03037
]
120955903
Cilium and associated proteins [BR:
acoz03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
120955903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
TPR_2
TPR_7
TPR_8
WD40_Prp19
Beta-prop_EML
TPR_12
TPR_GEMI5
WD40_WDHD1_1st
TPR_1
TPR_COPA_B
Beta-prop_WDR75_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
SNAP
TPR_IFT80_172
WDR55
TPR_19
Beta-prop_WDR90_POC16_2nd
EIF3I
MIT
Motif
Other DBs
NCBI-GeneID:
120955903
NCBI-ProteinID:
XP_040233057
LinkDB
All DBs
Position
X:12187658..12199891
Genome browser
AA seq
1482 aa
AA seq
DB search
MTLYFDTKVQFLDSEAISTVSSWHPVEPIFAVASYSNERGGSVTIFDDTGIPLRDVSFPV
HPTSQATVLTWHPERKILLTGWENGEIHAWFEGKRDFASVNGPHKSPIMLLEFSEKGGRV
ITADAMGVLTGWRFDGQAQFLTMFNHDLRDPLLHITFRRSIQSASSKELTNLARAAVAGD
EAALDQLTSWRPRTAVRNLAHASVHDNYCFYACTQAGILYYINQTGTCTEIVRGDTIPIM
QILWHPKQDSIVILMEDITIGHYEVDTNGQIAELDRVKLSGKVSGSKSAITWVAGCALAI
LTGDLSVRIWDIETNDNYVLSMELTATGADRPPVTGATGAAAAQEVFTCVAYCADTQTLS
AGTSQGNLYTWRRAAGSYGRSYAGTENQWQLTNVTPVRGTIKSLVWGTTEANRACMMVNC
LSSVFILKEQSLLSAHARQLWATQKKSNELLIRHANGREALLHTDISIIHLALNELHLVV
TNGRTVAVYRIDPAGTMRGTRAGPDAGAEPDALAVSHVDSFAVECGAVYLYEQSIVALGT
EQVKIYSLSGIILQELVFNANEGKPIGVDLVGPYLTVFTLHGYIRLYDVSRHDIRLLQPP
KSAYDLFEKFGEIIMARTNANGTYVAITIANEQLLPDGKLYLWNLESNVLTAREFHTPEP
SGRTRWLKDGQGEGASSSAPNGHHCLPVAFFWDAEDARLLACETKPLPRQQQQQQQSRTL
QPESQIHVLFVDAPKSELAELELLDPNGAPGEQLELIGLCVPHLIVLRRNEIARLSLRDF
KGLDTCDLATREMVLNFSLNVAQENMDQAFSCIRSLRSDTVWANLARLCVQTGRLDVAKV
CLGHLRRARSVRALRRATEDATLEQEARVAVLAIELGMMEEAEALYKRCGRYDLLNKLYQ
ASGRFEEALEVAEHFDRVHLRNTYHRYAEWLKECGKTQKAIQYYERTTSLMHNISQLLMD
DPGALKQYMQATTDPELLRWWAQYVESSGDMEGAFKIYQRSGDWFSQVRILCFIGQVGRA
DEIARASGDRAACYHLGRYYENSGKLQEAIQFYTRAQTYGNAVRICKEHELPDDLWTVAC
TARARDKASAAAYYEESGDYRRAVELYHRAGMLHKAVEMAFRSQQPESLQVIASELDASS
DPDLVGRCADFFVGIEQPYKAVQLLANARQLARALAVCAEHRVPVTETLAELLTPGKDDL
AEGERTALLLRLGDILQEQGDYHAATKKFTQAGDRVRAMKSLLKSGDTDKIIFFAGMSRQ
KDVYVMAANYLQALNWQSDAKILKNIVTFYTKGQAYSQLANFYANCAQAEIDEFRDYDKA
LNALQEAVKSLSRAAPGAAGGSQPAALDALQLAMAEVRRVIELQDATERQEYSNVIKLIK
VRLEERQEPAPPVRVWDLLALLVECLVATGQHSEALYYVRELAQRKPDWYHQELLDKAVL
DRLVAETGVNLEPYVNVTKVKRPTTATISTMSDDEEIQEVFE
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atgacgctttacttcgacaccaaggtacagtttctggacagtgaggcgatcagtacggtc
agctcatggcacccggtggaaccgatctttgccgtcgcctcgtacagcaatgagcggggc
ggctcggtcacgatcttcgacgacacgggcataccgctgcgcgacgtatcgttcccggtg
catccgacgtcgcaggcgaccgtgctgacgtggcacccggagcgcaagatactgctgacc
gggtgggagaacggcgagatccacgcctggttcgagggcaagcgggactttgccagcgtg
aacgggccgcacaagtcgccgatcatgctgctcgagttcagcgagaagggcggccgggtg
atcacggcggacgcgatgggcgtgctgaccggctggcggttcgacgggcaggcccagttt
ctgacgatgtttaaccacgatctgcgcgacccgctgctgcacatcacgtttcgccgatcg
atccagagcgccagcagcaaggagctgaccaacctggcgcgggcggcggtggccggcgat
gaggcggccctggatcagctgaccagctggcggccccggacggcggtacgcaatctggcg
cacgcgagcgtccacgacaactactgcttttacgcgtgcacccaggccggcatactgtac
tacatcaaccagaccggcacgtgcacggagatagtgcgcggcgacaccatcccgatcatg
cagatactgtggcacccgaaacaggactcgatcgtgatactgatggaggacattacgatc
gggcactacgaggtcgacacgaacgggcagattgccgagctggaccgggtgaagctgtcc
ggcaaggtgtccggctcgaagagcgccatcacgtgggtggccggctgcgcactggcgatc
ctgaccggcgacctgtccgtccgcatctgggacatcgagacgaacgacaactacgtgctg
tcgatggagctgaccgcgaccggtgcagatcgacccccggtgaccggggcaaccggtgcc
gccgccgcccaggaagtgttcacctgcgtcgcgtactgtgccgacacgcaaacgctcagt
gccggcacgagccagggcaacctgtacacgtggcgccgggcggccggttcgtacggccgg
tcgtacgccggcaccgagaaccagtggcagctcacgaacgtgacgccggtgcggggcacc
atcaagagcctggtctggggcacgaccgaggcgaaccgggcctgcatgatggtcaactgc
ctgtcgagcgtgttcatactgaaggagcagtcgctgctgtccgcccacgcccgccagctg
tgggccacgcagaagaagtcgaacgagctgctgatccggcacgcgaacgggcgcgaggcg
ctgctccacaccgacatctccatcatccatctcgcgctgaacgagctgcacctggtcgtg
acgaacgggcgcacggtggcggtgtatcggatcgatccggccggtacgatgcgcggtacg
cgggcgggccccgacgctggcgcggaaccggacgcgctggccgtgtcgcacgtggacagc
ttcgcggtggaatgcggtgcggtgtacctgtacgagcagagcatcgtcgcgctcggcacg
gagcaggtcaagatttactcgctgagcggcatcatactgcaggagctggtgttcaacgcg
aacgaaggcaaaccgatcggcgtggatttggtcggcccgtatctaaccgtgttcaccctt
cacggctacatccgcctgtacgatgtgtcgcggcacgacatccgcctgctgcagccgccc
aaaagtgcgtacgatctgttcgagaagtttggcgaaatcattatggcgcgcacgaacgcg
aacgggacgtacgtggcgatcaccatcgcgaacgaacagctgctgcccgacggcaagctg
tacctgtggaacctggagagcaacgtgctaacggcgcgcgaattccacacccccgaaccg
agcggccggacccgttggctcaaggacggccaaggggagggagcgtctagtagcgccccg
aatggccatcactgtctgccggtggcatttttctgggacgcggaagacgcccgactgctc
gcgtgcgaaacgaagcccctgccgagacagcagcagcagcaacagcagtctcgcacgctc
cagccagagtcccagatacacgtgctgtttgtggacgcgccaaagtcggaactggccgag
ctggagctgctagacccgaacggtgcgccgggtgagcagctcgagctgatcgggctgtgc
gtgccgcacctgatcgtgctgcggcgcaacgagatcgcgcggctatcgctgcgcgacttc
aaggggctcgacacgtgcgatctggccacgcgcgaaatggtgctcaacttcagcctgaac
gtggcgcaggaaaacatggaccaggcgttcagctgcatccggtcgctgcgttcggacacg
gtttgggcgaatctggcccggctctgcgtgcagacgggccggctggatgtggcgaaggtg
tgcctggggcatttgcggcgtgcccggtcggtgcgggcgctgcgccgtgcgaccgaggac
gccacgctcgagcaggaggcccgcgttgcggtgctggcgatcgagctcggcatgatggag
gaggcggaagcgctgtacaagcggtgcggccggtacgatctgctcaacaagctgtaccag
gcgtccgggcggttcgaggaggcgctcgaggtggcggaacacttcgaccgggtgcacctg
cgcaacacgtaccaccggtacgcggagtggctgaaggagtgcggcaagacgcagaaagcg
atccagtactacgagcgcaccaccagcctgatgcacaacatcagccagctgctgatggac
gatccgggcgcgctgaagcagtacatgcaggcgacgaccgacccggagctgctgcgctgg
tgggcccagtacgtcgagagcagcggtgacatggagggcgcgttcaagatctaccagcgg
tcgggcgactggttctcgcaggtgcgcatcctctgcttcatcgggcaggtcggccgggcg
gacgagatagcgcgggcgagcggggaccgggccgcctgctaccatctcgggcggtactac
gagaacagcggcaagctgcaggaggcgatccagttctacacgcgcgcgcaaacgtacggc
aacgcggtgcgcatctgcaaggagcacgagctgccggacgacctgtggacggtcgcgtgc
acggcccgggcccgggacaaagcgtccgccgccgcctactacgaggagtcgggcgactat
cggcgggcggtcgagctgtaccaccgggccggcatgctgcacaaggcggtcgagatggcg
ttccggtcgcagcagcccgagtcgctgcaggtgatcgcgtccgagctggacgcgtcgtcc
gacccggacctggtcggccggtgtgcggacttcttcgtcggcatcgagcaaccgtacaag
gcggtgcagctgctcgcgaacgcccgccagctggcccgtgcgctggccgtctgtgccgag
caccgggtgccggtgacggaaacgcttgccgagctgctcacccccggcaaggacgacctg
gcggagggagagcgcacagcgctgctgctgcgcctcggcgacatactgcaggagcagggc
gactaccacgcggcgacgaagaagtttacgcaggcgggcgaccgggtgcgcgcgatgaag
agtctgctcaagtcgggcgacacggacaagatcatcttctttgccggcatgtcgcgccag
aaggacgtgtacgtgatggcggccaactacctgcaggccctcaactggcagagcgatgcg
aagatactgaagaacatcgtcacgttctacacgaaggggcaggcgtacagccagctcgcc
aacttttacgccaactgtgcgcaggcggagattgacgagttccgggactacgacaaggcg
ctgaatgcgctgcaggaggcggtgaagagcttgtcgcgtgctgcgcccggggcggccggt
ggatcgcagccggccgccctcgatgcgctgcagctggcgatggccgaggtgaggcgcgtg
atcgagctgcaggacgcaacggagcggcaggagtacagcaacgtgatcaagctgatcaag
gtgcggctggaggagcggcaggaaccggcgccgcccgtgcgcgtctgggatctgctggcc
ctgctggtggagtgtctggtcgcgaccggtcagcactccgaggcgctgtactacgtgcgc
gagctggcccagcgcaagccggactggtaccatcaggagctgctcgacaaggccgtgctc
gatcggctggtcgcggagacgggcgtcaatctggagccgtacgtgaacgtgacgaaggtg
aagcgtccgacgacggccacgatatccacgatgagcgatgatgaagaaattcaggaggtg
tttgagtag
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integrated database retrieval system
