Anopheles coluzzii: 120956945
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Entry
120956945 CDS
T07312
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
acoz
Anopheles coluzzii
Pathway
acoz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acoz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120956945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoz03019
]
120956945
03041 Spliceosome [BR:
acoz03041
]
120956945
Messenger RNA biogenesis [BR:
acoz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
120956945
Spliceosome [BR:
acoz03041
]
Complex B
Other components
Prp19-related factors
120956945
Complex C
120956945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
TPR_14
HAT_PRP39_C
Suf
TPR_12
TPR_2
TPR_10
Mad3_BUB1_I
ARM_TT21_C
PPR
ARM_TT21
NRDE-2
SNAP
Ribosomal_L27A
Motif
Other DBs
NCBI-GeneID:
120956945
NCBI-ProteinID:
XP_040234723
UniProt:
A0A6E8W665
LinkDB
All DBs
Position
3:complement(99038716..99041969)
Genome browser
AA seq
862 aa
AA seq
DB search
MPISSEVNLAEVFFNEEDLPYEEEILRNAYSVKHWMRYVEHKRNAPRFVINTVFERALKE
LPGSYKLWYNYLKTLRKQVKGKCITDGEYEEVNNAFERALVFMHKMPRIWMDYCAFMTAQ
CKITRTRQVFDRALRALPITQHHRIWPLYLDFLKRFDIPETAVRVWRRYLKLCPEDAEEY
VEFLQSIGHLDEAAQQLASIVDNEHFVSKHGKSNHQLWNELCELISKNPDKVHSLNVDGI
IRGGLRRYTDQLGHLWNSLAGYYVRSGLFDRARDIYEEAIQTVTTVRDFSQVFDAYAQFE
ELSLSKVMELLERNPNPTEDQEIDVELRMARFEYLMERRLLLLNSVLLRQNPHNVAEWHK
RVELYEGKPHEIINTYTEAVHTVQPKLAVGKLYTLWVAFAKFYETNKQLADARVVFEKAV
QVDYLKVDELASVWCEWAEMEIRQEQYEEALRIMQRATAMPKRKVAYHDDTETVQMRVYK
SLKLWSMYADLEESFGTFKTCKQVYDRIIDLKICTPQIIINYGMFLEEHNYFEEAFKAYE
KGIALFKWPNVYDIWNTYLTKFLSRYGGQKLERSRDLFEQCLDGCPPELAKNLYLLYAKL
EEQHGLARHAMAVYERATTAVKEEEMYAMFNLYIKKAADIYGIPRTRQIYEKAIEVLPEA
DSRKMCVLFAEMETKLGEIDRARAIYAHCSQMCDPRVTADFWQTWKEFEIRHGNEDTMRE
MLRIKRSIQATYNTQINMMSAALINAAVTTGEPPKDAMRALEVKAAETTARAIAAVGATG
GNIMFVRGETQGGAAKEDRVVNPDEIDIDDEEEEDDDDEAAGDENGEDIAKKIPIERQSI
PAKVFGSLRREVEEKEENDMAE
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgccgatctcatcggaagtgaatctggcggaagtgttcttcaacgaggaagacttgccg
tacgaggaggagatccttcgcaatgcctactcggtgaagcactggatgcggtacgtggag
cataagcgcaatgcgccccggttcgtcatcaacaccgtgttcgagcgggccctgaaggag
ctgcccggctcgtacaagctgtggtacaactatctcaaaaccctgcgcaagcaggtgaag
ggaaagtgcatcacggacggggagtacgaggaggtgaacaatgcgttcgagcgagcgctc
gtcttcatgcacaagatgccccgcatctggatggactactgcgcgttcatgacggcccag
tgcaagataacgcgcacgcggcaggtgtttgatcgggcgctgcgtgcgctcccgattacg
cagcaccatcgcatctggccgctgtacttggacttcctcaagcggttcgacatcccggag
acagcggtccgggtgtggcgccgctacctgaagctctgcccggaggacgcggaagagtac
gtggagtttctgcagtcgatcggccatctggacgaggcggcccagcagctggccagcatc
gtggacaacgagcacttcgtgtcgaagcatggcaaatcgaaccaccagctgtggaacgag
ctgtgcgagctgatttccaaaaacccggacaaagtgcactcgctcaatgtggacggcatc
atccgcggtgggctgcggcggtatacggatcagctcggccacctgtggaactcgctggcc
gggtattacgtgcgcagcgggctgtttgatcgcgcgcgcgatatctacgaggaagcgatc
caaacggtcacgacggtgcgcgactttagccaggtgttcgatgcgtacgcgcagttcgag
gagctgagcctgagcaaggtgatggagctgctggagcgcaacccgaacccgaccgaggat
caggagatcgatgtggagctgcggatggcgcggttcgagtatctgatggagcgccggctg
ctgctgctgaacagtgtgctgctgcgccagaacccgcacaacgtggccgagtggcacaag
cgggtggagctgtacgagggcaagccgcacgaaatcatcaacacctacacggaggcggtc
cacacggtgcagccgaagctggccgtcggcaagctgtacacgctgtgggtggcattcgcc
aagttttacgaaaccaacaagcagctggccgacgcgcgcgtcgtgttcgaaaaggccgtc
caggtggactatctgaaggtggacgagctggccagcgtgtggtgcgagtgggccgagatg
gaaattcgccaggagcagtacgaggaggcgctgcggatcatgcagcgcgcgacggcgatg
ccgaagcgaaaggtggcctaccacgacgacaccgagacggtgcagatgcgcgtgtacaag
tcgctcaagctgtggtcgatgtacgcggatctggaggaaagcttcggcacgttcaagacg
tgcaagcaggtgtacgatcgcatcatcgatctgaagatctgcacgccccagatcatcatc
aactatggcatgtttctcgaggagcacaactacttcgaggaggcgttcaaggcgtacgag
aagggcatcgcgctgttcaagtggcccaacgtgtacgacatctggaacacgtacctgacc
aagttcctgtcccggtacggcggccagaagctggagcgatcgcgcgatctgttcgagcag
tgtctggacggctgcccgcccgagctggccaagaacctgtacctgctgtacgcgaagctg
gaggagcagcacgggctggcccgccatgcgatggccgtgtacgagcgggccacgaccgcc
gtcaaggaggaggaaatgtacgccatgtttaatctgtacatcaaaaaggcggccgatatc
tacggcataccccggacgcgccagatctacgagaaggcgatcgaggtgctgcccgaggcg
gactcgcgcaagatgtgcgtcctgttcgccgagatggaaacgaagctgggggaaatcgat
cgcgcacgggccatctacgcacactgcagccaaatgtgcgatccgcgcgtaacggccgac
ttctggcagacgtggaaagagttcgaaatccggcacggcaacgaggacacgatgagggaa
atgctgcgcatcaagcgctcgatccaggcgacttacaacactcagatcaacatgatgtcg
gcggccctgatcaacgcagccgttacgaccggcgaaccaccgaaggatgcgatgcgtgcg
ctggaggtgaaggcggccgaaacgacggcacgtgcgatagcggcggtcggcgcgaccggc
ggcaacattatgtttgtgcggggcgaaacgcagggaggagcggcgaaggaagatcgtgtg
gttaatcccgacgaaattgacatcgacgatgaggaggaggaggacgacgacgatgaagct
gcgggcgatgagaatggggaggacatcgccaaaaagattccgatcgagcgccaaagcatt
ccagcgaaggtgtttggcagcttgcgtcgggaggtagaggagaaggaagagaacgatatg
gcagagtag
DBGET
integrated database retrieval system
