Anopheles coluzzii: 120957594
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Entry
120957594 CDS
T07312
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
acoz
Anopheles coluzzii
Pathway
acoz03022
Basal transcription factors
acoz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acoz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120957594
09124 Replication and repair
03420 Nucleotide excision repair
120957594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acoz03021
]
120957594
03400 DNA repair and recombination proteins [BR:
acoz03400
]
120957594
Enzymes [BR:
acoz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
120957594
Transcription machinery [BR:
acoz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
120957594
DNA repair and recombination proteins [BR:
acoz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
120957594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
SWI2_SNF2
TniB
Motif
Other DBs
NCBI-GeneID:
120957594
NCBI-ProteinID:
XP_040235811
LinkDB
All DBs
Position
3:96254489..96257274
Genome browser
AA seq
818 aa
AA seq
DB search
MGPPKKSSKKDKSGSGSGSASGFVENKWNKKRRTEDEAYAAFADDDDSNLGESDFVPDAA
TKNAEKNDDAIQEDEYGAKDYRSQMELKPDNESRPLWVAPNGHIFLESFSPVYKHAHDFL
IAISEPVCRPEHIHEYKLTAYSLYAAVSVGLQTHDIVEYLKRLSKTTIPEGIVEFIRLCT
LSYGKVKLVLKHNKYFVESPHPEVLQKLLKDPVIQSCRLRRTEEEGGDGFIKQTLEKGKG
ITAFGQTKLAPGQTTLPAPGATTTETGEKLAEGGETVTEEAAVPEDITNFYDKMDNEEEE
EEANLNTVSFEVNQEKIEVLQKRCIEIEFPLLAEYDFRNDTINADINIDLKPAAVLRPYQ
EKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGVSVEQWKQQFKM
WSTADDSMICRFTSEAKDKPMGCGILVTTYSMITHTQKRSWEAEQTMRWLQEQEWGIMVL
DEVHTIPAKMFRRVLTIVQSHCKLGLTATLLREDDKIADLNFLIGPKLYEANWLELQKRG
YIARVQCAEVWCPMAPEFYREYLIAKTSKKMLLYVMNPAKFRACQYLIRYHEKRGDKTIV
FSDNVFALKHYAIKMNKPYIYGPTSQNERIQILQNFKFNPKVNTIFVSKVADTSFDLPEA
NVLIQISSHGGSRRQEAQRLGRILRAKKGAIAEEYNAFFYTLVSQDTLEMGYSRKRQRFL
VNQGYSYKVITHLAGMESDPDLFYKTREEQGQLLQQVLSATDMDCEDERMPGDGTGVPRP
GGSKRTGGLSSMAGADDAIYYERKKSAHQHPLFKKFRC
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgggtcctccgaaaaagtcctccaaaaaggataaaagtggttccggatcgggcagtgcc
agcgggttcgtggagaacaagtggaacaaaaagcgacggacggaagatgaagcgtacgcc
gcgtttgcggacgacgacgacagcaacctgggcgagagtgacttcgtcccggatgcggcc
acgaagaatgcggaaaagaatgacgatgcgatccaggaggatgagtacggggcgaaggac
tatcggtcgcagatggagctgaagccggacaacgagtcccggccgctgtgggttgcgccg
aacgggcacatcttcctggagtcgttctcgccggtgtacaagcacgcgcacgacttcctg
attgccatctcggaacctgtttgtcgcccggagcacatacacgagtacaagctgaccgcg
tacagtctgtacgcggccgtgtcggtcggcctgcagacgcacgacattgtcgagtacttg
aagcggctcagcaaaacaaccattccggaaggcatcgtggagttcatccggctctgtaca
ctgtcgtacggcaaggtgaagctggtgctgaagcacaacaagtactttgtggagagtcca
catccggaagtgctgcagaagctgctgaaagacccggtcatacagtcgtgccggttgcgc
cgcactgaggaggaaggtggcgatgggttcataaagcaaacactggagaaggggaaggga
ataacggcattcggacaaacgaaactagctcccggacaaaccacactgcccgcccccggc
gcaacaacaacggagacgggtgaaaaactcgcggaaggtggtgaaacggtcaccgaggaa
gcggccgtaccggaagatataaccaacttctacgacaagatggacaacgaagaggaagag
gaggaagcaaacctcaacacagtttcgttcgaggtgaaccaggaaaagattgaagtgctg
cagaagcgctgtatcgagatcgagttcccgctgctggcggagtacgatttccgcaacgat
acgatcaacgccgacatcaacatcgacctgaagccggccgccgtgctgcgcccctaccag
gagaaaagtttgcgcaaaatgtttggcaacgggcgggcccgatccggagtgattgtgttg
ccgtgcggtgccggcaaatcgctggtcggcgtaacggcctgctgtacggtgcgcaagcgt
gccctcgtgctctgcaacagcggcgtgtcggtggagcagtggaagcaacagttcaagatg
tggtccacggcggacgacagtatgatctgtcggttcacgtccgaggcgaaggataaaccg
atgggttgtggcattctcgtgacgacctactccatgataacgcacacccagaagcgttcc
tgggaggcggaacagacgatgcgctggctgcaggagcaggagtggggcatcatggtgctg
gacgaggtgcacacgatcccggcgaaaatgttccgccgtgtgctgaccatcgtacagtcg
cactgtaagctcgggctgaccgcaacactgctgcgagaggacgacaaaattgccgacctt
aacttcctgatcggtccgaagctgtacgaagcgaactggttggagctgcagaagcgtggc
tacattgcccgggtccagtgcgctgaggtatggtgcccgatggcgcccgagttctaccgc
gagtatctcatcgcgaagacgtcgaaaaagatgctgctgtacgtaatgaatccggccaag
tttcgggcttgccagtacttgatacgctaccacgagaagcgcggcgacaaaacgatcgtc
ttcagcgacaacgtgtttgcgctgaagcattacgcgatcaagatgaacaaaccgtacatc
tacgggccgacgtcacagaacgagcgtattcagatcctgcagaacttcaaattcaacccg
aaagtgaacacaatcttcgtgtcgaaggtggctgatacgagcttcgatctgccggaagcg
aacgtgctgattcagatctcctcgcacggtggatcgcgtcgtcaggaggcgcagcgtttg
ggtcgtatcttgcgtgcgaagaaaggcgctatcgcggaagagtacaatgcgttcttctat
acgctcgtgtcgcaggacacgctcgagatgggatattcgcgcaagcgccagcggttcctg
gtgaaccagggctacagctacaaggtgatcacgcatctggccggcatggagagcgatccg
gatctgttctacaagacgcgcgaagagcagggccagctgctgcagcaggtgctgtccgcg
accgatatggactgtgaggatgagcgtatgccgggcgatgggacgggcgtgccacgaccg
ggtggatcgaagcgtaccggcgggcttagctcgatggccggtgcggatgatgcgatctat
tacgagcggaagaaatcggcccatcagcatccactgtttaagaagttccgctgctag
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