Anopheles coluzzii: 120958179
Help
Entry
120958179 CDS
T07312
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
acoz
Anopheles coluzzii
Pathway
acoz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acoz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120958179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acoz03041
]
120958179
Enzymes [BR:
acoz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
120958179
Spliceosome [BR:
acoz03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
120958179
Complex C
U4/U6.U5 tri-SnRNP related factors
120958179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
Flavi_DEAD
nSTAND3
T2SSE
AAA_30
Cas3-like_C_2
MgtE_N
Motif
Other DBs
NCBI-GeneID:
120958179
NCBI-ProteinID:
XP_040236727
LinkDB
All DBs
Position
3:complement(25196506..25200419)
Genome browser
AA seq
891 aa
AA seq
DB search
MSKNTDRRKSYSSEDSSDEERHRDLKERDEFSKRLKQRDESNTRNVAASSDKRGADAAKR
LRLETADREKLLPELRKQSRRQYLEKRKEDKVAELEADIRDDEYLFPEAEITERERRDRE
HKKRLLQIAKDHEKARELERVQRYRMPKDVKKGEMEEYVEVDERERMPHSEQKKWEAEQL
ASAVYGFGSKDAKERAAQQQEYELLLDEQIDFVEALQMAGTKKKDDKPELTEAQRKKMTI
EETQTSLPIYPFKEDLIAAIQAHNILIIEGETGSGKTTQIPQYLYEAGFTNEGKKIGCTQ
PRRVAAMSVAARVAEEMAVKLGNEVGYSIRFEDCTSERTVIKYMTDGTLHREFLSEPDLA
SYAVMIIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSDFFDKAPIFRI
PGRRYPVDIFYTKAPEADYIDACVVSVLQIHATQPLGDILVFLTGQEEIEACQEMLQDRV
KRLGSKLKELLILPIYANLPSDMQAKIFEPTPPNARKVILATNIAETSLTIDNIIYVIDP
GFAKQNNFNSRTGMETLLVVPISKASANQRAGRAGRVAPGKCFRLYTAWAYNNELEDNTV
PEIQRINLGNAVLMLKTLGIHDLLHFDFLDPPPHQTLILALEQLYALGALNHHGELTKLG
RRMAEFPVDPMMAKMLLASEKYKCSEEIVSIAAMLSVNGAIFYRPKDKIIHADTARKNFN
HRHGDHLSLMQVYNQWVESDYSTQWCYENFIQYRSMKRARDVREQLVGLMQRVEIEMVSG
ESDTTNVRKAITAGYFYHVARLSKSGNYKTVKHNQDVMIHPNSALFEDLPRWLLYHELVF
TTKEFMRSVIEIESKWLLEVAPHYYKPKELEDPTNKKMPKIVGRAEMTANS
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaaacacagatcgacgtaaatcttactcttccgaagatagcagcgatgaagag
cgccaccgtgacctgaaggagcgtgacgaattttccaagcgactgaagcaacgcgatgaa
agcaatacgcgcaatgtggcggcatcgtctgacaagcgcggtgccgatgccgccaaacgt
ctccggctcgaaacggccgaccgggaaaagctgctgccggagctacgcaaacagtcccgc
cggcagtacctcgaaaagcgcaaagaggacaaggtagccgagctcgaggcggacatccgg
gacgatgagtacctgtttccggaggccgaaattacggagcgcgaacggcgcgaccgggaa
cacaagaagcgtctgctgcaaatcgccaaagaccatgagaaggcccgagagttggagcgc
gttcagcgctaccgcatgccaaaggatgttaagaagggcgagatggaggagtacgtcgag
gtggacgagcgggaacgtatgccccactcggagcagaaaaagtgggaagcggaacagctc
gcgtcggccgtgtacgggttcggctcgaaggatgcgaaggaaagggccgcccagcagcag
gagtacgagctgctgctcgacgagcagatcgactttgtggaggcactgcagatggccggt
acgaagaagaaggacgacaagccggagctgaccgaggcacagcggaaaaagatgaccata
gaagaaacgcaaacgtcgctaccaatttacccgttcaaggaggatcttattgccgccatt
caagcgcacaacattcttattattgaaggtgaaacgggctcgggaaagacgacccagatc
ccccagtatctgtacgaggccggatttacgaacgaagggaagaagattggctgtacgcaa
ccgcggcgtgttgctgccatgtccgtggcggcacgcgttgccgaggagatggccgtgaag
ctcggtaacgaggtcgggtacagcatccgtttcgaggactgtacgtcggaacggaccgtt
atcaagtacatgacggacggtacgctacatcgtgagtttctgtccgagcccgatctggcc
tcctatgcggtgatgataatcgatgaggcgcacgagcgcacgctgcatacagatattctg
ttcggtttggtgaaggatattgctagatttaggaaggatttaaagctgctcatttctagt
gccacgctcgatgcggaaaagttttcggactttttcgataaagctcccatttttcgaatc
cctggacgacgttatccggtggacatattttacacgaaagcacccgaagcggattacatc
gatgcctgcgtggtttccgtgttacagatacacgccacccaaccgctgggtgacatctta
gtctttctaaccggtcaggaagaaattgaagcctgtcaagaaatgctgcaagatcgtgtg
aaacgtcttggatcgaaactgaaggagctgcttatattaccaatttacgcaaatttaccc
tccgatatgcaggcgaagatatttgaaccgacgccaccgaacgcacgcaaagtgattctc
gctactaacattgctgaaacgtccctaacaatcgacaatatcatctatgttatcgatcca
gggtttgcaaagcagaacaattttaattcgcgcaccggaatggaaacactgcttgtcgtt
ccaatttcgaaagcgtctgccaatcagcgggcaggtcgcgccgggcgtgttgcccctggc
aaatgtttccggctgtacacggcctgggcttacaataatgagcttgaagataataccgtg
ccggaaattcagcgtatcaatttgggtaacgcagtgctgatgcttaagacgcttggaatt
catgatttgttgcactttgattttctcgatcctccaccgcatcaaacgttaatccttgcg
ttggaacagctgtacgcgctcggtgcactgaaccaccatggcgagctgacgaagttgggc
cgtcgtatggccgaattccccgtcgacccaatgatggctaaaatgttgctggcaagtgag
aagtacaaatgctcggaagagatcgtctcgatcgcagccatgctgtcggtcaatggtgct
atattttaccgcccgaaagataaaatcattcacgctgatacggcacgcaagaactttaat
cacagacacggggaccatctgagccttatgcaggtgtacaatcaatgggtcgagtccgac
tacagcacgcaatggtgctatgaaaatttcatccaataccgttcgatgaagcgggcgcgt
gatgtgcgcgaacagctcgtggggcttatgcagcgggtagaaattgagatggtgtccgga
gagtctgacacgacgaacgtacggaaggcgattactgctggctacttttatcatgtggcg
cggctttccaagtcgggaaattataaaacagtcaaacataatcaagacgttatgattcat
ccaaattcggctctttttgaagatttgccacgctggctgctgtaccatgagctggtgttt
acaacaaaagagtttatgcgttccgttatagaaattgagagcaaatggttgttagaggtg
gcaccgcattactacaagccgaaggaattggaagatccgactaacaagaaaatgcccaaa
attgttgggcgggcggagatgacggcaaattcgtga
DBGET
integrated database retrieval system
