Anopheles coluzzii: 120958184
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Entry
120958184 CDS
T07312
Name
(RefSeq) general negative regulator of transcription subunit 4-like isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
acoz
Anopheles coluzzii
Pathway
acoz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acoz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120958184
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoz03000
]
120958184
03019 Messenger RNA biogenesis [BR:
acoz03019
]
120958184
04121 Ubiquitin system [BR:
acoz04121
]
120958184
Enzymes [BR:
acoz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120958184
Transcription factors [BR:
acoz03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
120958184
Messenger RNA biogenesis [BR:
acoz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120958184
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
120958184
Ubiquitin system [BR:
acoz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120958184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-UDP
zf-CCCH_2
C1_2
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
120958184
NCBI-ProteinID:
XP_040236741
LinkDB
All DBs
Position
3:42994774..42998990
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AA seq
553 aa
AA seq
DB search
MMNNSSGDEQVECPLCMEPLEVDDLNFYPCTCGYQICRFCWHRIRTDENELCPACRKAYP
ENPADFTPLSQEQIAAFKAEKRQRDQQRRAKISENRKHLANVRVVQKNLVFVVGLPPRLA
DPEILKKHEYFGKYGKIHKVVINPSTTYAGVQGPSASAYVTYINNNDALRAIQSVNNIMI
DGRLIKTSLGTTKYCSHFMKNQTCPKPDCMYLHELGDQEASFTKEEMHQGKHQEYEKRLH
DAMQAQLGLTSAAGGHGSNGSGSAAATAATAASSGGGTATAAPTAGLVSSTAAAVVAASA
TTAAAAVAAGTTAAVNGNSAGNKENSNRSDRKHETKSRSKGGKNKQQQQQQQQQHNNKNS
HDNSSNHKDSTSNVTSANGVVAAAKGGSAALVNGKGSKASNGKQQQRNGASNAPEAHEHA
IVNGNSKEAQNNSKNLKQQQREREREQREQQSLLKGSSDSGEQQLQQKQQQPPQSKKREA
NGTSNGPTATSISNGNANGNGHIINNDLDDDDDELDFEDLDNDALSSDNDGKTDSPSLSS
SASSRNGVDSRDS
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacaacagcagcggcgatgagcaggtcgagtgtccactgtgcatggagccgcta
gaggtggacgatctgaatttctacccctgtacctgtggatatcagatctgtcgcttttgc
tggcaccggatccgcacggacgaaaacgagctgtgcccggcgtgccggaaggcgtacccg
gaaaacccggccgactttacgcccctgtcgcaggagcagattgcggcgttcaaggcggag
aaacggcagcgggaccagcagcggagggcgaagatttccgaaaaccgcaaacacctggcg
aacgtgcgggtggtgcagaagaacctggtgtttgtcgtggggttgccgcccagattggcc
gatccggagattctgaagaaacatgaatacttcggaaagtatggtaagatccataaagtg
gtcatcaaccctagtacaacgtatgccggtgtgcagggtccctcggcgtcggcgtacgtg
acgtacatcaacaacaacgacgcgctgagggcgatccaaagcgttaacaacatcatgatc
gatggtcgactgataaagacgagcttaggtacgacgaagtactgtagccactttatgaaa
aaccaaacctgtcccaagccggactgcatgtacttgcacgagctcggcgaccaggaggct
agctttacgaaggaggagatgcaccaagggaagcatcaagagtacgagaagcggctgcac
gatgccatgcaggcgcagttaggtctgacgtctgcagcaggagggcatggcagcaacggc
agtggtagtgcggcggcaacggcagcgacggcggcgtcctctggcggtggtacggccacc
gcggccccgaccgccggcctggtgtcgtcgacggcggcggcagtggtggcggcgtcggcg
acgacggcagcggcggctgttgcggcgggaacaactgcagcagttaatgggaatagcgcc
ggcaacaaggaaaactcgaaccgaagcgaccgaaagcacgaaacgaaatctcgctcgaaa
ggaggcaaaaacaagcagcagcagcagcaacagcagcaacaacacaacaacaaaaatagt
cacgacaattccagtaatcataaagatagtacaagcaacgtgactagtgccaacggtgtt
gttgctgctgcgaagggaggcagtgcggcgttggtaaacggcaagggaagcaaggcttcg
aacggaaagcagcagcagcggaacggtgctagcaacgccccagaagctcacgagcatgcg
attgtgaacggtaacagcaaggaggcacagaacaatagcaaaaacctgaagcagcagcag
cgcgaacgcgaacgggaacagcgggagcagcaatccctgctcaagggaagcagtgatagc
ggcgagcagcagctgcagcagaaacagcagcaaccaccacagagcaaaaagcgagaagct
aacggcaccagcaatggccccacggcgaccagcattagcaatgggaacgcaaatggaaac
ggccatattatcaataatgatctggacgatgacgatgacgagctggactttgaggatctg
gacaatgacgcactgtcgtcggacaatgatggcaaaacggattcgccttcgttaagtagt
tcggcttcctcccggaacggagtggacagtagagacagctag
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integrated database retrieval system
