Anopheles coluzzii: 120959038
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Entry
120959038 CDS
T07312
Name
(RefSeq) collagen alpha-1(III) chain
KO
K06237
collagen type IV alpha
Organism
acoz
Anopheles coluzzii
Pathway
acoz04512
ECM-receptor interaction
acoz04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acoz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120959038
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120959038
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acoz04147
]
120959038
00536 Glycosaminoglycan binding proteins [BR:
acoz00536
]
120959038
Exosome [BR:
acoz04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
120959038
Glycosaminoglycan binding proteins [BR:
acoz00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120959038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
120959038
NCBI-ProteinID:
XP_040238099
UniProt:
A0A6E8VZ84
LinkDB
All DBs
Position
3:28215196..28244915
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AA seq
1813 aa
AA seq
DB search
MLWPADPTLTGGLERKDIVQRRRRSSAGSVTRGVALFVTSVLLIIQPSTAAVCNQTVCDC
KGVQGPPGQIGPHGVPGQFGDPGDIGYDGPPGLRGDRGNRGEMGTSGPKGYRGDTGERGP
LGAPGYAGLPGEPGYRGPYGIDGCNGTDGAMGTPGYPGPPGERGPQGPPGVPGPRGTSGE
GGINSKGTKGDRGVAGVPGVMGQQGWQGGRGADGFDGTTGETGDAGLDGPKGEQGEPSED
FCPGEPGDPGEPYYYLVGKNETVNIGMKGPKGDRGYDGMAGLQGMKGDSGMQGDRGQKGF
KGEEGKLGDRGKQGKEGPPGAPGDKGEKGAPGYAGLDGMPGDKGPSGDDGRPGLPGVQGP
PGPKGEYRPELAPIVIGPQGPQGDMGPPGRPGNVGIPGNKGLRGPMGPPGPPGDPGLNGR
PGPKGISPPGQRGDDGEGGPPGPLGIRGIPGLAGAKGQVGFPGRNLQGAKGEPGTNGLNG
DFGEKGDQGDDGEPGDKGLPGIGVNVTGPPGPAGLPGRAGPPGDWGFNGYNGPKGDKGLR
GDDCGTCPPGPKGVKGEDGDIGRPGLDGYDGNRGLPGPRGLQGPAGKQGLKGLLGRKGER
GDFGERGVPGEPGRPGVLRRAKNFIDLTPEMGDRGDRGQRGDQGVPGDLGDFGAVGYPGR
PGEQGEYGDDGDSGRPGLDGLPGMDGRNGAPGRDAFVNEYNIWSIRGTPGVPGDKGAKGE
RGDQGDRGEPGAMSEMTYSIAGPKGLPGVPGDVGPKGEKGYKGEMGLHGMRGQDGPAGLP
GVSRQGPEGYKGYYGVIGDHGPAGMPGEDGRPGPDGMPGLQGLRGQRGDPGRPILMGEKG
VEGEGGFYGEIGDKGFKGPEGIRGTTGMPGVKGERGDPGPLGKPGLRGNKGQMGDIIYGD
RGAPGLPGRDGLQAPYGDKGERGEPGMEGFPGPKGERGEIGRDGLPGLPGDDGLPGERGL
QGRMGDMGEEGYQGERGPTGDPGYPGLTGARGLAGLRGLAGPTGDPGDMGFPGRDGAPGR
KGERGDFGDVGPRGRKGSASFSGMKGENGEPGMMGPPGYNARPGQMGRKGEEGDAGQVID
GYPGVKGQKGAPGFPGIPGRPGAKGERGDVGVFGPKGISGDKGRDGYPGIAGRPGRPGPR
GPLGPRGEQGSRGETGEPGEDGLRGYAGEKGLRGDVGPVGPTGLTGMVGDPGLPGIPGNV
MMRSAQQGDRGDPAPEGPEGDEGPPGLKGQRGYPGRKGEQGLPGFVGMVGIEGHDGPKGQ
RGDPGMKGQPGELETRPERGDQGDAGYDGLTGRPGLPGNKGAPGDYGDNGPMGLAGMPGF
VNGALKGMRGDTGYEGAPGLDGLPGLPGLDGVMGPAGPRGMPGSIGAIMPGFRGDPGEDG
LPGLDGMAGPPGFPGDRGLTGLPGLRGLPGPKGLQGEVGLEGYHGMVGLKGMKGEVGDLP
NLSNWRPTQPGDRGTPGLRGEPGDEGDMGPPGYPGSRGPKGMQGLQGEQGATGEVGFKGE
QGIAGAPGRSGIEGLPGLPGLPGEPAAPPPPPKNLGYLFARHSQKVTIPECPINTYKLWD
GYSLVNVIASSRSVGQDLGAAGSCLRRFSTMPFMFCDINNVCNYASNNDDTIWLATPEPM
PMSMAPIPADQVERYISRCSVCESNTRVMALHSQSMSIPDCPEGWEELWLGYSYAMHTSD
NSGGFGQDFVSPGSCMEEFRPQPVIECHGHGTCNFYDGISSFWLTIIDDAMQFNRPQPQT
LKAHQTSKVSRCIVCRRKAGIMRTLHGGSTITASALRRANTSTVYPPPPPQPAPGSRRRV
SPGRQRNRNRYQG
NT seq
5442 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggcccgcggaccccacgctcacggggggtctggaacgtaaggacatcgtccaa
cggaggcgccgaagctctgctgggtcggtgacgcgcggtgtggcgcttttcgtcacttcg
gtgcttctgataatacagccatcaacggcagcggtctgcaaccagacggtatgtgactgt
aaaggagtgcagggaccgccgggacagattggaccgcacggtgtaccagggcagtttggc
gatccgggcgatattgggtacgatgggccgccgggactacgcggcgatcgtggaaatcga
ggcgaaatgggcacgagtggaccgaaaggatatcgtggtgacactggcgagcgaggaccg
ctgggagccccgggctatgcgggacttccgggcgaacccggctaccgcggcccgtacggt
atcgacggttgcaacggcacggacggtgcgatgggaacacccggctacccgggaccaccg
ggcgagcgtggcccccaaggtcctccaggtgtgcccgggccgcgtggtacctccggcgaa
ggcggtatcaactccaagggcaccaagggcgatcggggcgtggctggcgttcccggcgtg
atgggccagcagggctggcagggtggccgcggtgcggacgggttcgatggaacgaccggt
gagacgggcgatgccggactggatggccccaaaggcgagcagggcgaaccgagcgaagac
ttctgtccgggcgaaccgggcgatccgggcgaaccgtactactatctggtcggcaaaaac
gaaacggtcaacattggcatgaagggcccgaagggtgaccggggctacgatggaatggcc
ggactgcagggcatgaagggcgactcgggcatgcagggcgaccggggccagaaaggcttc
aagggcgaggaaggcaagctcggcgatcggggcaagcagggtaaggagggaccaccgggc
gcaccgggcgacaagggcgagaagggtgcgcccgggtacgccggactggacggtatgccg
ggcgacaagggcccctcgggagacgatggacggccggggctgccgggtgtgcagggaccg
ccgggaccgaagggcgaataccgtcccgagctggcaccgattgtgattggaccgcaggga
ccgcaaggtgacatgggaccaccgggacggccgggcaacgttggcatccccggcaacaag
ggcttgcgcggccccatgggtccaccgggtccgcccggcgatccgggactgaatggacgg
cccggcccgaaaggcatctcgccgccaggacagcgcggtgacgacggcgagggaggacca
ccgggaccgctcggcatccgaggcataccggggctggcgggcgcaaagggacaggtcggt
ttcccggggcgaaatctgcagggcgccaagggcgaacccggtacgaacgggctgaacggc
gactttggcgagaagggcgaccagggcgacgatggcgaaccgggcgacaagggtctgccc
ggcatcggtgtgaacgtgacggggccacccggaccggccggactgcctggcagggcggga
ccgcccggcgactggggcttcaacggatacaatggcccgaaaggtgacaaaggtttgcgc
ggcgacgactgtggcacgtgcccgcccggaccgaagggcgtcaaaggcgaggacggtgat
atcgggcggccgggattggacggatacgacgggaatcgggggctgccggggccgcgcggc
ttgcagggtccggccggaaagcaaggcttgaagggactgttgggccgtaaaggcgaacgg
ggcgactttggcgaacgtggtgtaccgggcgaaccgggacgaccgggtgtgctgcgacgg
gcgaaaaacttcatcgatctgacgccagaaatgggcgatcgaggcgacagagggcagcgc
ggcgatcaaggtgttccgggcgatttgggcgactttggagctgttggatatccgggacgg
ccgggcgaacagggcgaatacggtgacgacggtgactctggccggccgggtctggacggg
ctgccgggcatggacggtcgcaacggtgcgccgggtcgggatgcgttcgtcaacgagtac
aacatctggtctattcgcggcacacctggtgtaccgggcgacaaaggtgccaaaggagag
cgcggtgaccagggagatcggggcgaaccgggcgccatgtcggagatgacgtacagcatc
gcgggcccgaaaggcttgccgggagtgcccggcgacgtcggccccaagggagaaaagggc
tacaagggcgaaatgggattgcacggaatgcgcggccaggatggaccggccggactgccc
ggcgtcagccgtcagggaccggagggctacaagggctactacggcgtgatcggtgaccac
gggccggccggcatgccgggcgaagatggccgtcccggaccggacgggatgcccggtctg
caggggctgcgcggccagcgcggtgacccgggccgaccgatactgatgggcgaaaagggc
gtggaaggcgagggcggcttctacggcgaaatcggcgacaaaggcttcaagggcccggaa
ggtatccgcggcacgaccggaatgccgggagtgaagggagagcggggcgatccgggcccg
ctcggcaagccgggcctgcgcggcaacaagggccagatgggtgacatcatttacggcgat
cgtggagcgccgggcctgccgggccgcgatggtctgcaggcaccgtacggcgacaagggc
gaacggggcgaaccgggcatggaaggtttccccgggcccaagggcgagcggggcgaaatc
ggacgcgacggactgcccggactgcccggcgacgatggactgccgggcgagcgcggcctg
cagggacgcatgggcgatatgggcgaggaaggctaccagggcgaacggggaccgacgggc
gatccaggctatcccggtctgaccggcgcccgcggactggcgggactgcgcggactggcc
ggcccgaccggcgacccgggtgacatgggcttcccggggcgcgacggagcaccgggccgg
aagggcgagcgcggtgactttggcgatgtgggaccgcgcggacgcaagggcagcgcctcg
ttcagcggcatgaagggcgaaaacggcgagccgggcatgatgggcccgcccgggtacaac
gcacgccccggccagatgggtcgcaagggcgaggagggagacgccggccaggtcatcgac
ggatatccgggcgtgaagggacagaagggcgccccgggcttccccggcatcccgggccga
ccgggtgcgaagggcgagcggggagatgtcggcgtgttcggcccgaagggtatctccggc
gacaagggacgcgatggctatccaggcattgccggacgcccgggacggcccggaccgcgt
gggccgttgggcccgcgaggagagcaaggatcgcggggcgaaacgggcgaaccgggcgag
gacggactgcgaggctacgctggcgaaaagggactgcgcggtgacgtcggtccggtcgga
ccgaccggtttgactggaatggtgggcgacccgggactgcctggcatccccggcaacgtt
atgatgcgctcggcccagcaaggcgaccgcggtgaccccgcccccgagggtccggaagga
gacgagggaccgccgggactgaagggccagcgaggctacccgggccggaagggcgaacag
ggactgcccggattcgtcggcatggtcggcatcgagggacacgacggaccgaagggacag
cgcggcgaccccggcatgaagggacagccgggcgagctggaaacgcgccccgagcgaggc
gaccagggcgacgctggctacgatggactgaccggacggcccggcctgcccggcaacaag
ggagcgccgggcgactacggcgacaacgggccgatgggactggccggcatgccaggcttc
gtgaatggtgcgctgaagggcatgaggggcgacaccggctatgagggagcccccgggctg
gacgggctgcccggcctgcccggcctggacggtgtgatgggtccggccggaccgcgcggc
atgcccggcagcatcggcgccatcatgcctggcttccggggcgatccgggcgaggacggg
ctgccggggctggacggaatggccggcccgcccggcttcccgggcgaccgaggactgacg
gggctgcccggactgcgcggactgcccgggccgaagggtctgcagggcgaggtcggactc
gaaggctaccacggcatggtgggcctgaagggcatgaagggcgaggtgggcgatctgccc
aacctgtccaactggcggccgacgcaaccgggcgaccggggcacgcccggactgcgtggc
gagcccggcgacgaaggtgacatgggcccgccgggctacccgggcagccggggccccaag
ggcatgcagggactgcagggcgagcagggcgctacgggcgaggtcggcttcaagggcgag
cagggcattgccggtgcccccggacggagcggtatcgagggactgccggggctgccggga
ttgccgggcgagccggcggcaccaccgccaccgcccaaaaacttgggctacctgttcgcg
cgccactcgcagaaggtaaccatcccggagtgcccgataaacacgtacaagctgtgggac
gggtactcgctcgtgaacgtcatcgctagcagccggtcggtggggcaggatctcggtgcg
gccggatcgtgcctgcggcgcttcagcaccatgccgttcatgttctgtgatattaacaac
gtctgcaactacgcctcgaacaacgacgacacgatctggctggcgacgcccgaaccgatg
ccgatgtcgatggcaccgatcccggccgaccaggtcgagcggtacatctcgcgctgcagc
gtgtgcgagtcgaacacgcgcgtcatggcgctgcacagccagtcgatgagcataccggac
tgtccggaaggatgggaggagctgtggcttggctacagttatgcaatgcacacgtcggac
aactcgggcggcttcggtcaggactttgtgtcgcccggctcgtgcatggaagagttccgg
ccgcagcctgtcatcgagtgccacgggcacggtacgtgcaacttctacgacggtatctcc
tccttctggctgacgatcattgacgacgcgatgcagttcaaccggccccagccgcaaacg
ctgaaggcacaccaaacgagcaaagtgagccgctgcatcgtttgccgtcgaaaggcaggc
atcatgcgaacactgcacgggggcagcacgataacggcgtcggcccttcgcagagccaat
acgtctacggtgtacccgccaccgccaccacagccggcaccaggctctagaagacgggtg
tccccgggtcggcagcgtaatcgcaaccgctaccagggctag
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