Anopheles coluzzii: 120959944
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Entry
120959944 CDS
T07312
Name
(RefSeq) zinc finger protein swm
KO
K13192
RNA-binding protein 26
Organism
acoz
Anopheles coluzzii
Brite
KEGG Orthology (KO) [BR:
acoz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
acoz01009
]
120959944
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoz03019
]
120959944
03041 Spliceosome [BR:
acoz03041
]
120959944
Protein phosphatases and associated proteins [BR:
acoz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120959944
Messenger RNA biogenesis [BR:
acoz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
120959944
Spliceosome [BR:
acoz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120959944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup35_RRM_2
RRM_Nup35
RRM_1
PWI
RRM_PARP14_3
zf-CCCH
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
120959944
NCBI-ProteinID:
XP_040239674
UniProt:
A0A6E8VYD1
LinkDB
All DBs
Position
3:complement(36053924..36062580)
Genome browser
AA seq
1311 aa
AA seq
DB search
MFINNTEALKVWLTAVLEPLCDADPAALARYVLALLKKDKPEKDLIVSMKEQLDVFLSEE
TQPFLDRLFRVIKSEEYLKCAPAPAVPAAPAVVSNGATVGAVPSSTTSSGSSTAQAQAAS
TTPAGASANHHHAEEVTSSSRTTIKREFTPPLQESSSSGTGGRSSKSVASSAGSNYSSAA
GSGGVTATSGSITSERSTSSSHHHHHHHSGGGGGTSERSEKGRGSETTSSSGAPSVSSSS
GGGGTLGGGASSQKSSSTHHQQHSPIKGSGKDDHGKESSSSSNNTRRSRRTQNRSRSRSR
SRSRSFERPRDTRRSRSRELQQRPRGGGAGGGSLGGSGNDSKSGGSRSSSYRNKSPLRGS
DSFRRYERKGYSDRRNSGPNASGTMAGSGAGTNAASSGGGGSSGSGGGNGVGSSRSQRIR
SHSRSRSPSPNSDRRKMARSMTPVRQAAVAAARAVGGALVAGDTVASAGGGMVVDGVAVV
NPVSALVGPPGVTGGVPIIPVGGVVPTVAPVPPPSAGALDRVLNAAAGEGGAATAVPLGG
GGGSVKRQRCRDFDEKGYCMRGETCPWDHGADPLVLEGLNNPAMIAQIRGPIAAEYSPDA
PALWNKHPNVQQGPPGMGGGGGGGGVATGIRPALAQRLGGGGFGPRGGPGPGGMGVQFRG
VSPGFPMQGGGGFAGNPIGATPLQRELISVPVVDANKGGDVSADHRSNRFEPEDAVAIAD
AGPMMMGGGGKRKMPMHNRHGPRPGGGHGGGPGGPGSMQMMNTQHNCSLELRKIPRGLNE
ISHLNDHFSKFGKITNIQIRYDNDPEAAIVTFSSHAEANVAYRSTEAVLNNRFIKVFWHT
PPAGGDQPAITASAKTEHSLRRTYPNQYSINNNLSSAGATGTTQTGPIVAGGKTLQAKDD
ANPLANGNENLAPQQQQQPGGPKAHGGNNANKYISPGTGAPLQGGGVGGNKGSNRAQNEM
LRKRQEQFTKGINERKVFLMDGYLKEQRKLLELIVTYEVSDPRRPQLKESLDELQVKINN
LRKEIEQDHQLLKANTARGPGPHGPKHKTKEQHDKEMLDAELEQIAQETRTFRTPDGPAV
AAAAAATIAPGQKGPYGGGGRKGGPVGRVAPPGSTSVDRRPTTILITGFVEEEADSLLDH
FKQFGEVTKHQLDKAEPSLTIGFSTRPVAEKALARGKLFNKKTLTIVWQTTVAAAAPAPS
AASLAGASAGGAGTTATTADSGKEQGGRGDSNPLVHSSSGSSDGGDGASLKQHDSDGADR
MGLGSGGSAADQLHSSSMETLTETDELIEMPIMVEEEEEEDDIEPERSWRR
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atgttcatcaacaacacggaagcgctgaaggtatggctgacggcggtgctggaaccgctg
tgcgatgcggacccggccgccctcgcccggtacgtgctggcgctgctgaagaaggacaag
ccggagaaggatctgatcgtgtcgatgaaggagcagctggacgtgttcctgtcggaggaa
acgcaaccgttcctggaccggctgttccgggtgatcaagagcgaggagtatctgaagtgt
gcgccggccccggcagtcccagccgctccggctgtggtgagcaacggtgcgacggtcggc
gctgtgccatcgtccactaccagcagcggcagcagcaccgcccaagcacaggctgcttcc
acgacacccgccggcgcttccgcgaaccaccatcacgccgaggaggtgaccagcagctcc
cggacgacgattaagcgcgagtttacgccaccgctgcaggagtcgtcgtcgtccggcacg
ggggggcgatcgtcgaaatcggtcgccagctcggccggctccaactattcgtcggcagct
ggcagtggtggagtgacggctactagcggctcgatcacgtcggaacgatccacctcctcg
tcccatcatcaccatcaccatcacagtggcggcggtggtggcaccagtgagcggtcggag
aagggccgcggcagcgaaacgacctcttccagcggcgcaccatccgttagcagcagtagc
ggaggaggaggaacgcttggcggtggtgccagcagccaaaagtcttcttccacccaccat
cagcagcactcgcccatcaaaggatccggcaaggatgatcatggtaaagagagcagcagc
agcagcaacaacacccgccgaagccgccggacgcagaatcgatcgcgcagccgctcccgg
tcccggtcgcgatcgttcgagcggccgcgagatacgcgtcgatcccgctcgcgcgaactg
cagcagcgtccgcgcggtggtggtgctggaggtggcagcctcggtggcagcggtaatgat
tcaaagtccggcggaagccgttcgtcctcgtaccgcaacaagtcgccgctgcgcggaagt
gattcgttccgtcggtacgagcggaaggggtacagtgatcggcgcaacagcggtccgaat
gccagtggcacgatggcaggatcgggcgccggcacgaatgcagcatcgtcgggaggcggt
ggtagcagtggcagcggcggcggcaacggtgtaggcagcagccgctcgcaaaggatccgt
tcgcactcgcgcagccgttcgccgtcaccgaactcggaccgtcgaaagatggcccgctcg
atgacgccggtccgtcaggcggcggtagcagcagcccgagcggtgggtggtgctttggtg
gcgggtgacacggtagcatcggccggtggcggtatggtggtggatggagtggccgtagtc
aatccggtgtcggcgctggttggaccgcccggcgttacgggcggtgtgccgatcattccc
gtcggcggggtagtaccgacggtcgcacccgtaccgccaccgtccgccggagcgctcgat
cgcgtgctgaatgcggcggcgggtgagggaggagcagcaacagccgtcccgctgggcggt
ggaggaggttcggtgaagcgtcagcggtgccgtgacttcgacgagaaagggtactgcatg
cgcggcgaaacctgcccctgggatcacggggccgatccgctcgtgctagaaggtctgaac
aatccggccatgattgcacagatccgcggcccgattgcggccgagtacagtccggatgcg
cccgccctgtggaacaaacacccgaacgtgcagcagggaccaccggggatgggcggaggc
ggcggcggcggcggcgtggcgaccggtatacgacccgcgctggcccagcgcctcggcggc
ggaggatttggaccccgtggcggaccgggaccgggtggtatgggtgtacagttccggggc
gtgtcgcccggcttcccgatgcagggcggcggtggctttgcgggcaatccgatcggtgcg
acgccgctgcagcgcgaactgatctccgtgccggtggtggacgcgaacaagggcggcgat
gtgtcggccgaccatcgcagcaatcggttcgagccggaggatgcggtcgccatcgcggac
gccgggcccatgatgatgggcggtggcggcaagcgcaagatgccgatgcacaaccggcac
ggaccgaggccgggcggtggacacggtggcggcccgggcggccccggctcgatgcagatg
atgaacacgcagcacaactgctcgctggagctgcgcaagattccgcgcgggctgaacgag
atatcgcacctgaacgatcacttttcgaagttcgggaagattaccaacattcagatccgg
tacgataacgatccggaggcggcaattgtgacgttttcgtcgcacgcggaagcgaacgtc
gcgtaccggagtacagaggccgtgctcaacaatcggtttattaaggtgttttggcacacg
ccaccggcgggcggtgatcagccggccattacggcgtcggcaaagacggaacactcgctg
cggaggacgtacccgaaccagtacagcatcaacaacaatctgagctcggcgggtgcgacc
ggcacgacacagaccggcccgatcgtggcaggcggcaaaacgctccaggcgaaggacgac
gcgaacccgttggcaaacgggaacgagaatctcgcaccgcagcaacagcagcaaccagga
ggcccgaaagcacacggtggcaataacgcgaacaagtacatcagccccggtacgggcgcg
ccgttgcagggtggtggcgtcggcggcaacaagggcagcaaccgtgcgcaaaacgaaatg
ctgcgcaagcggcaggaacagttcaccaagggcatcaacgagcggaaggtgttcctgatg
gacgggtacctgaaggagcagcgtaagctgctggagctgatcgtgacgtacgaggtgagc
gatccgcgccgaccgcagctgaaggagtcgctcgatgagctgcaggtgaagatcaacaat
ctgcgcaaggagatcgagcaggaccaccagctgctgaaggcgaatacggcgcgcggcccc
gggccccacggcccgaagcacaagacgaaggagcagcacgacaaggagatgctggacgcg
gagctggagcagattgcgcaggaaacgcgcacgttccgcacgccggacggtccggcggtg
gcggcggcggcagcggcaacgatcgcgcccggtcagaagggaccgtacggcggtggtggg
cgcaagggcggtcccgttgggcgggtagcaccgcccggctcgaccagcgtcgatcgccgc
ccaacgaccatcctgatcaccgggttcgtcgaggaggaggcggactcgctgctggaccat
ttcaagcagttcggcgaggtgacgaagcaccagctcgacaaggcggaaccgtcgctgacg
atcgggttcagcacgcgaccggtggcggagaaggcactcgcgcgcggtaagctatttaac
aagaaaaccctcacgatagtgtggcagacgacggtggctgcagcggcaccggcaccgtcg
gcggcatccctcgccggcgcatcggctggtggagcgggcacgacggcgacaacggccgac
tcgggtaaggagcaaggcggccggggcgacagcaatccgctcgtccattctagcagtggc
agcagcgacggtggggacggtgcgtccctgaagcagcacgacagtgacggtgcggaccgg
atggggctcggcagcggtggcagtgcagctgaccagctgcactcctcctcgatggaaacg
ctgaccgagacggacgagctgatcgagatgccgatcatggtggaggaggaggaggaagag
gacgacatcgagccggaacgttcctggcgccgctaa
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