Anaeromyxobacter dehalogenans 2CP-1: A2cp1_0878
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Entry
A2cp1_0878 CDS
T00833
Name
(GenBank) superfamily I DNA and RNA helicase-like protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
acp
Anaeromyxobacter dehalogenans 2CP-1
Pathway
acp03420
Nucleotide excision repair
acp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A2cp1_0878
03430 Mismatch repair
A2cp1_0878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acp03400
]
A2cp1_0878
Enzymes [BR:
acp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A2cp1_0878
DNA repair and recombination proteins [BR:
acp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A2cp1_0878
MMR (mismatch excision repair)
Other MMR factors
A2cp1_0878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C_2
AAA_19
UvrD_C
AAA_30
UvrD-helicase
AAA_25
AAA_16
AAA_12
Motif
Other DBs
NCBI-ProteinID:
ACL64230
UniProt:
B8JEA4
LinkDB
All DBs
Position
993670..995784
Genome browser
AA seq
704 aa
AA seq
DB search
MRAIPASPAPVLEGDTLTAAARAIVAEEEALLATVQRALAARLAPARGEGDLVGRLRDLR
DEALEATPKDLPTVFQEMGLLRAVMERVRPDQLPDPAAPYFAHLRVHEGGERRDYFLGRH
TFVDRPAGVRVVDWRFAPVAGIFYRYREGEEFEEAFPGRVATGTVEARRVVVVERGVLTR
IAAGPLTLVREGGRWRALAAEAAALGGGAGSAARAGALGTGAGAAGRAGPADITALLDPD
QYEAVAAPADRPLLVLGSAGSGKTTVALHRLARIAFEDPRRFPPARLQVVVPELGLARLA
ARLLEPLGLERSPVRTLESWSRGAFQSVFGAPPPRLFPETPPLVARLKRHPALYELLRRR
PHVARERPALARLRRELGDLFVDRGFLEAVVKAAAGTLPATAVDETLRHTRLQLSSSTED
LLAGVDPERLQTLDGKAVDEDTPEAAAGTLDVEDLPILLFLAALRAGAPARKAAHLVVDE
AEDVTLFELHVLGRHLAGTSVTLAGDESQQTFASYAGWPQALAALGAPAAATVRLATTYR
CPEPVAALAHAVLGPIAPPERPRAGRRGAPVSRFDFPTEAHAHLFLAGALRDLVEREPGA
SAAVVCSGPEVARSLHRLLADMPEARLSLDGAFTFRPGVDLTDVDGVKGLEFDYVVVPDA
TARAYPETDEARRRLHVAVTRAAHQLWIAAPGTPSPLLRGLPRG
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
ttgcgagcgatccctgccagcccggcgcccgttctcgagggcgacacgctcaccgcggcg
gcgcgcgccatcgtggccgaggaggaggcgctcctcgccaccgtgcagcgggcgctcgcg
gcccggctcgcgccggcgcgcggggagggcgatctggtcgggcgcctgagggacctgcgc
gacgaggcgctggaggcgacgcccaaggacctgcccacggtcttccaggagatgggcctc
ctgcgcgcggtgatggagcgcgtccgccccgaccagctcccggaccccgccgcgccgtac
ttcgcgcacctgcgcgtgcacgagggcggcgagcggcgcgactacttcctcggccgccac
acgttcgtggaccggcccgccggcgtgcgcgtggtggactggcggttcgcgccggtggcc
gggatcttctatcgctaccgggagggcgaggagttcgaggaggcgttcccgggccgggtc
gccaccggcacggtggaggcgcggcgggtggtggtggtggagcgcggggtgctgacccgg
atcgcggccggcccgctgacgctggtgcgcgagggcgggcggtggcgggcgctggccgcc
gaggcggcggcgctgggcggcggggcggggtcggcggcgcgcgccggcgcgctcgggacc
ggcgccggcgcggccggccgcgcgggtccggccgacatcaccgcgctgctcgatccggac
cagtacgaggcggtcgccgcgcccgcggaccgcccgctgctcgtgctcggctccgccggc
agcggcaagaccaccgtcgcgctgcaccggctcgcccggatcgccttcgaggacccgcgg
cgcttcccgccggcgcggctgcaggtggtggtgccggagctcggcctggcccggctcgcg
gcgcggctgctcgagccgctcggcctggagcggtcgccggtccggacgctcgagtcctgg
tcgcgcggcgcgttccagagcgtgttcggcgccccgccgccgcgcctgttcccggagacg
ccgccgctcgtcgcccggctgaagcgccacccggcgctctacgagctgctccgccgccgg
ccgcacgtcgcccgggagcggccggccctggcgcggctgcgccgcgagctcggcgacctg
ttcgtcgatcgcgggttcctggaggcggtggtgaaggcggccgcggggacgctgccggcg
accgccgtcgacgagacgctccgccacacgcggctgcagctctcctcctcgaccgaggac
ctgctggcgggcgtggacccggagcggctccagacgctggacgggaaggcggtggacgag
gacacgcccgaggccgccgccggcacgctcgacgtcgaggacctgcccatcctgctgttc
ctcgcggcgctccgggcgggcgcgccggcgcggaaggcggcgcacctggtggtggacgag
gcggaggacgtgacgctgttcgagctgcacgtgctcgggcggcacctcgccggcaccagc
gtcacgctcgcgggcgacgagagccagcagaccttcgcgtcctacgccggctggccgcag
gcgctcgccgcgctcggcgcgccggcggcggccacggtgcgcctcgcgacgacctaccgc
tgcccggagccggtcgcggcgctggcccacgccgtgctcgggccgatcgccccgccggag
cggccgcgcgccggccggcgcggcgcccccgtgtcgcgcttcgacttccccaccgaggcg
cacgcccacctgttcctggcgggcgcgctgcgcgacctggtggagcgggagccgggcgcg
tccgccgcggtggtgtgcagcgggcccgaggtcgcgcgcagcctgcaccggctgctggcc
gacatgccggaggcgaggctctcgctcgacggcgcgttcacgttccgtccaggggtggac
ctcaccgacgtcgacggcgtgaaggggctcgagttcgactacgtggtggtgccggacgcc
accgcccgcgcctaccccgagaccgacgaggcgcgccgccggctccacgtggccgtgacc
cgggccgcccaccagctctggatcgcggcgccgggcacgccctcgccgctgctgcgcggc
ctgccgcgcggctga
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