Achromobacter sp. PD1: ACM1PE_02050
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Entry
ACM1PE_02050 CDS
T11306
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
acpd Achromobacter sp. PD1
Pathway
acpd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acpd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACM1PE_02050 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acpd03019
]
ACM1PE_02050 (pnp)
03016 Transfer RNA biogenesis [BR:
acpd03016
]
ACM1PE_02050 (pnp)
Enzymes [BR:
acpd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACM1PE_02050 (pnp)
Messenger RNA biogenesis [BR:
acpd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACM1PE_02050 (pnp)
Transfer RNA biogenesis [BR:
acpd03016
]
Prokaryotic type
tRNA degradation factors
ACM1PE_02050 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_KhpA-B
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
XPR18558
LinkDB
All DBs
Position
449248..451410
Genome browser
AA seq
720 aa
AA seq
DB search
MFNKVTKSFQYGQHTVVLETGEIARQASGAVVVSIEDTVVLATVVASKKAKPGQTFFPLT
VDYIEKTYAAGRIPGGFFKREGKPSEKETLTSRLIDRPLRPLFPEDFYNEVQVVIHTLSV
NPEIDPDIPAMIGASAALAISGIPFNGPIGAARVGYIDGQYAINPTASQLKSSKLDLVVA
GTENAVLMVESEADQLSEEIMLGGVVYGHQQMQAVINAIHELVKDAGKPDWDWQAPAKDE
ALIAAVTAAAQEGLNAAYQIREKQARTTKLREVSADVSAKLAAAAAEKGEAAPDAVAVDN
IMFSLESAIVRGQILNGEPRIDGRDTRTVRPISVRLGVLPRAHGSALFTRGETQALVVAT
LGTKQDEQIIDALMGEYRDRFMLHYNMPPFATGETGRIGVPKRREIGHGRLAKRALIPLL
PAPEDFQYTIRIVSEITESNGSSSMASVCGGSLAMMDAGVPVKDHVAGVAMGLILDGGKF
AVLTDILGDEDHLGDMDFKVAGTENGVTALQMDIKIQGITKEIMQVALAQAREGRLHILG
KMKEALDGSRGELSAFAPRMLTIKINPEKIRDVIGKGGATIRALTEETGTQIDISDDGTI
VIASVDEAQAKEAQRRIVELTADVEVGQIYEGAVLRLLDFGAIVQVLPGRDGLLHISEIA
NYRIANINDVLKVGQQVRVKVIEADDKGRLRLSIKAIGGIEQQQSAAAPEAAPQSEPQAE
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaaagtgacaaaatcgttccagtacggccagcacacggtcgtcctggaaact
ggcgagatcgctcgccaggcctccggcgccgttgtggtgtcgatcgaggacaccgtcgtc
ctggccaccgtcgtggcttccaagaaggccaagccgggtcaaacgtttttcccgctgacc
gttgactacatcgagaagacctacgccgccggccgcatcccgggtggcttcttcaagcgc
gaaggcaagccctccgagaaggaaacgctgacctcgcgcctgatcgaccgtcccctgcgc
ccgctgttccccgaagacttctacaacgaagtccaggtggtcatccatacgctgtcggtc
aatcctgaaatcgatcccgacatccccgccatgatcggcgcctcggccgcgctggccatc
tcgggcatcccgttcaacggcccgatcggcgccgcgcgcgtgggctacatcgatggccag
tacgccatcaacccgaccgcctcgcagctgaagtcgtccaagctggacctggtcgtcgcc
ggcaccgaaaacgccgtgctgatggtggaatccgaagccgaccagctgtccgaagaaatc
atgctgggcggcgtggtctacggccaccagcaaatgcaggccgtcatcaacgccattcac
gaactggtgaaggacgccggcaagcccgattgggactggcaagcgcccgccaaggacgaa
gccctgatcgccgcggtcaccgccgctgcccaggaaggcctgaacgccgcctaccagatc
cgcgaaaagcaggctcgcaccaccaagctgcgcgaagtgtcggctgacgtgtcggccaag
ctggctgccgccgccgccgaaaagggcgaagcggcgccggacgccgttgctgtcgacaac
atcatgttctcgctggaatccgccatcgtgcgcggccagatcctgaacggcgagccccgc
atcgacggccgcgacacccgcaccgtgcgtcccatcagcgtgcgtctgggcgtgctgccc
cgcgcacacggcagcgcgctgttcacccgtggtgaaacccaggcgctggtcgtggccacg
ctgggcaccaagcaggatgagcagatcatcgacgcgctcatgggcgagtaccgcgaccgc
ttcatgctgcactacaacatgcctccgttcgccaccggcgaaacgggccgcatcggtgtg
cccaagcgccgcgaaatcggccacggccgcctggccaagcgcgcgctgatcccgctgctg
ccggctccggaagacttccagtacaccatccgcatcgtctcggaaatcaccgagtccaac
ggctcgtcgtcgatggcttcggtctgcggcggctcgctggccatgatggacgccggcgtg
ccggtcaaggatcacgtggccggcgtggccatgggcctgatcctggacggcggcaagttc
gccgtgctgacggacatcctgggcgacgaagatcacctgggcgacatggacttcaaggtt
gcgggcaccgagaacggcgtcaccgcactgcagatggacatcaagatccagggcatcacc
aaggaaatcatgcaagtggcgctggctcaggcccgcgaaggccgcctgcacatcctgggc
aagatgaaggaagcgctggacggttcgcgcggcgagctctcggctttcgctccgcgcatg
ctgaccatcaagatcaaccccgagaagatccgcgacgtgatcggcaagggcggcgccacc
atccgcgcgctgaccgaagaaaccggcacgcagatcgacatctccgacgacggcacgatc
gtgatcgccagcgtcgacgaagcgcaggccaaggaagcccagcgccgcatcgtcgaactg
accgccgacgtcgaagtgggccagatctacgaaggcgccgtgctgcgcctgctggatttc
ggcgccatcgtgcaagtgctgccgggccgcgacggcctgctgcacatctcggaaatcgcc
aactaccgcatcgccaacatcaacgatgtgctgaaggtcggccagcaagtccgcgtcaag
gtcatcgaggccgacgacaagggccgcctgcgcctgtccatcaaggccatcggcggcatc
gagcagcagcaatccgctgcggcccccgaagccgccccgcaatcggaaccgcaagctgaa
taa
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