Achromobacter sp. PD1: ACM1PE_03125
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Entry
ACM1PE_03125 CDS
T11306
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
Organism
acpd Achromobacter sp. PD1
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
PTCB-BRCT
HHH
BRCT_2
Zn_ribbon_NUD
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
XPR18769
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Position
680467..682575
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AA seq
702 aa
AA seq
DB search
MSGASGGENAAQAAARLRAEIEQHNVRYYVYDDPSISDAEYDRLMRELQALEAEHPELVT
PESPTQRVGAAPVSAFGSVRHVVPMLSLGNAFDEEDVTAFDRRVTDTLRGAGLLGPAQQA
DYFCELKLDGLAISLRYEDGRLVQAATRGDGQTGEDVTSNIRTIKAIPLQLKGAYPKVLE
VRGEVLMNRADFEKLNQAQAKRDEKVFVNPRNAAAGSLRQLDPRITAKRPLRFFAYGWGE
VQGLAGSQGGLFAEASAGVAEASQLPEKSHGAMLDWLASLGLPVNVKHNHRASGAEGLMA
FYAKVGALRPDLPYDIDGVVYKVDSLPAQKVLGFVARAPRFALAHKFAAEEATTTLLDIE
VQVGRTGAITPVARLKPVFVGGVTVTNATLHNEDEIRRKDVRIGDTVIVRRAGDVIPEVL
GPVLEKRPDDAREFVMPTACPVCGSAIERLEDETIARCTGGLFCGAQRKQTLWHAASRKA
LDIEGLGEKLVDQLVDSGRVKTLADLYSLRPLELVGLDRMGQKSADNLVAAIDKARAPGL
NRLLYALGIRHVGETTARDVARHFGSIDAIMDADEDALSSVPDVGPVVAASIRRFFAEQH
NRDVIEQLKSQGVNPVAEAAPQATTLAGKTFVLTGTLPNWTREEASMRIQAAGGKVSGSV
SKKTAYLVAGEDSGSKLAKAQELGVAVLDEDGLKALLGEQGG
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgcgtctggcggtgaaaacgcggcgcaggccgcggcgcgcttgcgcgccgaa
atcgaacagcacaacgtccgctactacgtctacgacgatccctcgatatcggatgccgag
tacgaccggctgatgcgcgaactgcaggccctggaggccgagcatccggagctggtgacg
ccggagtcgccgacgcagcgcgtgggtgcggcgcctgtttcggcatttggcagcgtgcgt
cacgtggtgccgatgctgtcgctgggcaatgccttcgacgaagaagacgtgacggccttc
gaccgccgcgtcaccgacacgctgcgcggcgcgggcctgctggggccggcgcagcaagcc
gattacttctgcgagctcaagctggacgggctggcaatcagcctgcgctacgaagacggc
cgcctggtgcaggccgccacccgcggcgacggccagacgggtgaagacgtcacctccaat
atccgcaccatcaaggcaattccgctgcagctcaagggggcgtaccccaaggtgctggaa
gtccgcggcgaagtcctgatgaatcgcgccgacttcgaaaaactgaaccaggcccaggcc
aagcgcgacgagaaagtcttcgtcaatccgcgcaatgccgccgcgggcagcctgcgccag
ctggatccgcgcatcaccgccaagcggccgctgcgcttcttcgcctatggctggggcgaa
gtccagggcctggcgggttcgcagggcggcttgtttgccgaagcgtcggccggcgtggcc
gaggcctcgcaattgcccgagaaatcccacggcgccatgctggactggctggcctcgctg
ggcctgccggtcaacgtcaagcacaaccaccgcgccagcggcgccgagggcctgatggct
ttctacgccaaggtcggcgcgctgcggcccgatttgccctacgacatcgacggcgtggtc
tacaaggtggattcgctgcccgcgcagaaggtgctgggtttcgtcgcgcgcgcgccgcgc
ttcgcgctggcgcacaagttcgccgccgaggaagccaccaccaccttgctcgacatcgag
gtgcaggtgggccgcaccggcgccatcacgccggtggcgcgcctgaagcccgtgttcgtc
ggcggcgtgaccgtcaccaacgccacgctgcataacgaagacgagatccgccgcaaggac
gtacgcatcggcgacacggtcatcgtgcgccgcgcgggcgacgtgattccggaagtactg
ggcccggtgctggaaaagcgcccggacgacgcccgcgaattcgtcatgcccacggcctgt
ccggtttgcggctccgccatcgaacgcctggaagacgagaccatcgcgcgttgcaccggc
ggtttgttctgcggcgcgcagcgcaagcagacgctgtggcacgccgccagccgcaaggcg
ctggacatcgaaggcctgggcgaaaaactggtggatcagttggtcgacagcggccgggtc
aagaccctggccgacctgtacagcctgcgtccgctggaattggtgggcctggaccgcatg
ggccagaaatccgccgacaacctggtggccgccatcgacaaggcgcgcgcgcccggcttg
aaccgcctgctgtacgcgctgggcatccgccacgtgggcgagaccacggcgcgcgacgtg
gcgcgccatttcggcagcatcgacgccatcatggacgccgatgaagacgccttgtcctcc
gtacccgacgtgggcccggtggtggcggcttcgatccgccgtttcttcgccgagcagcac
aaccgcgacgtgatcgaacaactgaagtcgcagggcgtgaatcccgtggccgaggcggcg
ccgcaagccacgacgctggccggcaagaccttcgtgttgaccggcacgctgcccaattgg
acgcgcgaagaagcctcgatgcgcatccaggcggcgggcggcaaggtcagcggctcggtg
tccaagaaaacggcctatctggtggccggcgaggattccggcagcaagctcgccaaggcc
caggaactgggcgtggcggtgctggacgaggacggcctgaaggccttgctgggcgagcag
ggcggctga
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