Achromobacter sp. PD1: ACM1PE_04025
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Entry
ACM1PE_04025 CDS
T11306
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
acpd Achromobacter sp. PD1
Pathway
acpd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
acpd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACM1PE_04025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acpd03021
]
ACM1PE_04025
Transcription machinery [BR:
acpd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACM1PE_04025
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
PhyR_sigma-like
HTH_24
Rv2175c_wHTH
HTH_11
HTH_31
Motif
Other DBs
NCBI-ProteinID:
XPR18943
LinkDB
All DBs
Position
874743..875276
Genome browser
AA seq
177 aa
AA seq
DB search
MSSTLLSASAARTDPPAAPVDGLYRDHRSWLFGWLRRRLGCEHRAEDLAQDVFLRVIQGR
KAVRAAEARGLLTTIAKGLVVDHQRHAALERAYLAYLAAIPEAYAPSPEEQTEQLQSLAR
LDRLLDGLPPKARSAFLLSQLDGLTYPEIARRLEVSLSSVQQYMVRAMTACYAAFDD
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
gtgtcttccaccctcctgtccgcatcggccgcgcgcaccgaccctcccgccgcgcccgtc
gatggcctgtaccgcgatcatcgctcctggctgttcggctggctgcgccgcaggctgggc
tgcgagcaccgcgccgaagacctggcgcaggacgtgttcctgcgggtgatccagggccgc
aaggcggtgcgcgccgccgaagcgcgcgggctgctgaccaccattgccaagggtctggta
gtggaccaccagcggcatgcggccttggaacgggcctatctcgcctatctggccgccatt
cccgaggcctatgcgccatcccccgaggaacaaaccgagcagctgcaatcgctggcgcgg
ctggaccgtctgctggacggcctgccgcccaaggcccgatccgcgttcctgctgtcgcag
ctcgacgggctgacctatcccgagatcgcccggcggctcgaggtttccttgagttcggtg
cagcaatacatggtgcgcgccatgaccgcgtgctacgcggcctttgatgactag
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