Achromobacter sp. PD1: ACM1PE_05575
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Entry
ACM1PE_05575 CDS
T11306
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
acpd Achromobacter sp. PD1
Brite
KEGG Orthology (KO) [BR:
acpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acpd03032
]
ACM1PE_05575
03036 Chromosome and associated proteins [BR:
acpd03036
]
ACM1PE_05575
03400 DNA repair and recombination proteins [BR:
acpd03400
]
ACM1PE_05575
DNA replication proteins [BR:
acpd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ACM1PE_05575
Chromosome and associated proteins [BR:
acpd03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
ACM1PE_05575
DNA repair and recombination proteins [BR:
acpd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
ACM1PE_05575
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
2C_adapt
Motif
Other DBs
NCBI-ProteinID:
XPR19234
LinkDB
All DBs
Position
1202272..1202544
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELIDHIASKADISKAAAGRSLDALIGAVKTTLKKGGTVTLVGFGTFAVSARAARTG
RNPRTGETIKIKKAKVPKFRPGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaccgaactcatcgatcacatcgccagcaaggccgacatctccaaggccgcc
gctggtcgttcgctcgacgccctgatcggtgccgtcaagaccaccctgaagaagggcggt
acggttacgttggttggctttggcacgttcgctgtgtcggctcgcgccgctcgcaccggc
cgtaatccgcgcactggcgaaaccatcaagatcaagaaggccaaggtgccgaagttccgt
ccgggcaaggccctgaaggacgccgtcaactaa
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