Achromobacter sp. PD1: ACM1PE_08010
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Entry
ACM1PE_08010 CDS
T11306
Name
(GenBank) sigma-54-dependent transcriptional regulator
Organism
acpd Achromobacter sp. PD1
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA
MCM
AAA_16
HTH_7
HTH_29
AAA_2
HTH_28
AAA_3
FleQ
Xre-like-HTH
HTH_23
AAA_7
Motif
Other DBs
NCBI-ProteinID:
XPR19696
LinkDB
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Position
complement(1702903..1704237)
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AA seq
444 aa
AA seq
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MARILIVDDDVAFLDSLSETLHDLGHSVLQATSTSAGLNRLRTEAVDLAIVDLRMRDEDG
LVFLRKAAAIKPVPCIMLTAYASGGNTIEALRLGAFDHLTKPVSRATLVQTLERALQQSP
VADINTAQTESSPGEDLELVSGSEAMRDVFKRIGMTAGSDATVLILGETGTGKELVARAV
HRNSPRAARAFVAVNCAAIPAELMESELFGHVKGAYTGATSDRAGRFREAEGGTLFLDEI
GDMPLSTQSKILRVLQEREITPVGGTRVVPVNVRIVAATHRDLPAAVEAGRFRQDLWYRL
QVVPIELPPLRERLGDVLLLAEHFLRRIGGRAPKRLTAAAAQRLLAHSWPGNVRELRNAM
ERAAVLSRGSAIEPEHLGVLVADPAANVPGIALDGPLAPAVAALECAMIRRALAAASGNR
AEAARRLGLSRQQLYRKLAEHGLE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcatcctgatcgtcgatgacgacgtggcgtttctggacagtttgtccgagacc
cttcatgacctgggccattccgtgcttcaggccacatccaccagtgcaggcttgaacagg
ttacggaccgaagccgtggatttggcaattgtcgacctgcgcatgcgcgatgaggacggc
ttggtcttcctacgcaaggccgcggcaatcaagccggttccgtgcatcatgctgacggca
tatgcaagtggcggcaacaccattgaagccttgcggctgggcgcattcgatcacctgacc
aaacccgtgtcgcgcgccacgctggtacagacgctggaacgggcattgcagcagtcgcca
gtggctgacattaacaccgcccagacggaatcgagtcccggcgaagatcttgagcttgtc
agcggcagcgaggccatgcgcgatgttttcaagcgcatcgggatgacggcaggcagcgac
gccacagtgctgattctgggcgagaccggtacaggcaaggagctggtcgcacgcgccgtg
caccgcaacagccctcgcgcggcgcgggcgttcgtggcggtcaactgcgccgccattccc
gccgaactgatggaaagcgaactgttcggtcacgtcaagggagcctacaccggcgctacc
agcgatcgtgccgggcgtttccgtgaagcggagggcggaacgctgttcctcgacgaaatc
ggcgatatgcccttgtccacgcagtccaagattctgcgtgttctgcaggaacgcgagatc
acgccagtaggcggcacgcgcgtcgtgcccgtgaatgtgcgcatcgttgcggctacgcac
cgcgacctgccggccgcggtcgaggctggcaggtttcggcaagacctgtggtaccggtta
caggtagtgcccatagagctgccccccttgcgcgagcggctgggcgatgtcctgctgcta
gccgagcattttctccggaggatcggagggcgggctcccaagcgtcttacggctgccgcg
gcgcaacggctgttggcccactcatggcctggcaatgtacgcgaattgcgcaatgcgatg
gaacgcgcggcggtactgagccgcggatcggccattgagccggaacatcttggcgtgcta
gtggcggaccctgccgcaaacgtacccggtattgcactggatggtccgctggccccggcg
gtggccgcgctcgaatgcgcaatgatccggcgggccctggccgcagcaagcggcaaccgg
gccgaggcggcacgccggcttggactatcgcgacagcagctgtatcgcaaactggctgaa
cacgggctcgaataa
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