Achromobacter sp. PD1: ACM1PE_08515
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Entry
ACM1PE_08515 CDS
T11306
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
acpd Achromobacter sp. PD1
Pathway
acpd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
acpd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACM1PE_08515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acpd03021
]
ACM1PE_08515
Transcription machinery [BR:
acpd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACM1PE_08515
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
PhyR_sigma-like
Sigma70_ECF
Sigma70_r4
HTH_23
HTH_11
GerE
HTH_24
HTH_40
Xre-like-HTH
MarR
HTH_29
HTH_20
HTH_38
TnsD
HTH_36
MarR_2
HTH_28
Motif
Other DBs
NCBI-ProteinID:
XPR19791
LinkDB
All DBs
Position
complement(1811423..1811929)
Genome browser
AA seq
168 aa
AA seq
DB search
MSATEFAVPPQGIDVLYANHHGWLKGWLRRRLGNSSDAADLAHDTFMRLLVRGETVAVRE
PRALLTTVAQGVVSNFMRRRRIEEAYLASLANLPEREAPGPETRAILLETLIELDRRLDT
LAAPVRQAFLLSQLEGMKQADIAATLNVSLATVQRHIAKAAHLCFFGA
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgaccgagtttgcagtgccgccccagggcatcgatgtgctgtacgcgaatcac
catggctggctgaagggctggctgcggcggcggctgggcaattcctctgacgcggccgat
ctcgcacacgatacgttcatgcgtctgctggtccggggcgagaccgtcgcggtgcgcgaa
ccgcgcgcgctgctgaccacggtggcgcagggcgtggtgtccaatttcatgcggcgccgc
aggatcgaagaggcctatctggccagcctggccaacctgccggagcgggaagcgcctggc
cccgagacgcgcgccatcctgctcgagacgctgatcgaactggaccgccgcctggatacg
ctggccgcgccggtgcgccaggcattcctgctctcgcagcttgaaggcatgaagcaggcg
gacatcgccgcaacgctgaacgtctcgctcgctaccgtgcagcgccatatcgcaaaagcg
gcgcacctttgttttttcggcgcctga
DBGET
integrated database retrieval system
