Achromobacter sp. PD1: ACM1PE_15895
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Entry
ACM1PE_15895 CDS
T11306
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
acpd Achromobacter sp. PD1
Pathway
acpd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACM1PE_15895 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acpd03400
]
ACM1PE_15895 (uvrB)
DNA repair and recombination proteins [BR:
acpd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACM1PE_15895 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACM1PE_15895 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
DEAD
UVR
AAA_30
Kinesin
UB2H
Microtub_bd
DUF87
Motif
Other DBs
NCBI-ProteinID:
XPR21190
LinkDB
All DBs
Position
complement(3360018..3362138)
Genome browser
AA seq
706 aa
AA seq
DB search
MPKSAIDPITAGAAANLAADPAAALAVADPSAPGPGFIDFPGSPFHLYQPYPPAGDQPTA
IEGLTQGVEDGLMFQTLLGVTGSGKTYTMANVIARMGRPALVLAPNKTLAAQLYAEMREF
FPKNAVEYFVSYYDYYQPEAYVPTRDLFIEKDSSINEHIEQMRLSATKSLLERRDTIIVG
TVSCIYGIGNPGDYHAMVLILRAGDQISRREILARLVAMQYTRNDAEFTRGVFRVRGETI
DIFPAESPELALRLTLFDDEIESLELFDPLTGRIRQKLPRFTVYPGSHYVTPRDTVLRAI
ETIKEELRERVKRFVDDGHLVEAQRLEQRTRFDLEMLQELGFCKGIENYSRHLSGAAPGE
PPPTLIDYLPSDALMFIDESHVTIGQLGGMYRGDRARKETLVQYGFRLPSALDNRPLKLE
EFEARMRQCVFVSATPAAYEKEHTDNVVEQVVRPTGLVDPLVEVLPARTQVDDLLGQIKA
RVAQAERVLVTTLTKRMAEDLTDFLSEHGVRVRYLHSDIDTVERVEIIRDLRLGTFDVLV
GINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNLNGHAILYADRITDSM
QRAMEETERRRAKQLKFNADHGITARGVQKAVRELIDGVVAPTQHDALEAAVPAEFLKDE
KALAREIKRLEKLMMDHARNLEFEQAAAARDALTALKQRVLLDGAV
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagagcgcaatagacccgattacggcgggggccgcagcgaacctggcggccgat
cccgcggcggcattggccgtggcggatccgtccgcgccaggccccggattcatcgatttc
ccgggcagcccgtttcacctgtaccaaccctatccgccggcgggcgatcagcccaccgcc
atcgaggggttgacccagggggtcgaagacggcctgatgtttcagacgctattgggcgtg
acgggctccggcaagacctacaccatggccaacgtcatcgcccgcatggggcgcccggcg
ctggttctggcccccaataagacgctggccgcccagctgtacgccgaaatgcgggagttc
ttcccgaagaacgccgtcgagtacttcgtttcgtactacgactactaccagcccgaagcg
tacgtgccgacgcgcgacctgttcattgaaaaggattcgtccatcaatgagcacatcgaa
cagatgcggctgtcggcgaccaagagcctgctggagcgccgcgacaccatcatcgtgggc
accgtgtcgtgcatctacggtatcggcaacccgggcgactaccacgccatggtgctgatc
ctgcgcgccggcgaccagatctcgcgccgcgagatcctggcccgcctggtcgccatgcag
tacacccgcaacgacgccgagttcacccgcggcgtcttccgggtgcgtggcgagaccatc
gacatcttcccggcggaaagcccggaactggcgctgcgcctgacgctgttcgacgacgag
atcgaaagcctggagctgttcgatccgctgaccggccgcatccgccagaagctgccgcgc
tttaccgtctatcccggttcgcactacgtcacgccgcgcgacaccgtgctgcgcgccatt
gaaaccatcaaggaagagctgcgcgaacgggtcaagcgcttcgtcgacgacggccatctg
gtcgaggcgcagcggctggagcagcgcacccgtttcgacctggaaatgctgcaggagctg
ggcttctgcaaaggcatcgaaaactactctcgccacctgtccggcgcggcgccaggcgaa
ccgccgcccaccctcatcgactacctgccgtccgatgcgctcatgttcattgacgaaagc
catgtcaccatcggccagttgggcggcatgtaccggggcgaccgcgcgcgcaaggaaacg
ctggtgcagtacggctttcgcctgccgtcggcgctggacaaccggccgctgaaactcgag
gaattcgaggctcggatgcgccagtgcgtgttcgtgtcggccacgccggccgcctacgag
aaagagcacaccgacaacgtcgtggaacaagtggtgcggcctaccgggctggtcgatccg
ctggtcgaggtcctgccggcccggacccaggtcgatgacctcctcgggcagatcaaggcg
cgcgtggcgcaagcggagcgcgtgctggtcaccacgctgaccaagcgcatggcggaggac
ttgacggacttcctgagcgagcacggcgtccgagtgcgctatctgcattcggatatcgac
accgtcgagcgcgtggaaatcatccgcgacctgcgcctgggcacctttgacgtgctggtg
gggatcaacctgctgcgcgaagggctggatattcccgaagtgtcgctggtcgcgatcctg
gatgccgacaaggaaggcttcctgcgttcggaacgcagcctgatccagaccatcgggcgt
gcggcgcgcaacctcaacggccacgccatcctctatgcggaccgcatcaccgattcgatg
caacgcgccatggaggaaaccgagaggcggcgcgccaagcagctgaaattcaacgccgac
cacggcattaccgcccggggcgtgcagaaggccgtgcgcgaactgattgatggcgtggtc
gcgccgacgcagcacgacgcgctcgaggccgcagttccggcggagttcctgaaggacgaa
aaggccctggcccgcgagatcaagcgcctcgagaagctgatgatggatcatgcccggaac
ctcgagttcgaacaggcggctgcggcgcgcgacgcgctgaccgcgctgaagcagcgcgtg
ctgctggacggggcggtgtag
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integrated database retrieval system
