Achromobacter sp. PD1: ACM1PE_22020
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Entry
ACM1PE_22020 CDS
T11306
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
acpd Achromobacter sp. PD1
Pathway
acpd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
acpd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACM1PE_22020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acpd03021
]
ACM1PE_22020
Transcription machinery [BR:
acpd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACM1PE_22020
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_11
HTH_23
PhyR_sigma-like
HTH_17
HTH_24
GerE
HTH_29
MerR
Xre-like-HTH
HTH_38
HTH_Tnp_4
HTH_40
HTH_7
TnsD
HTH_IclR
HTH_28
Motif
Other DBs
NCBI-ProteinID:
XPR16076
LinkDB
All DBs
Position
complement(4673421..4673930)
Genome browser
AA seq
169 aa
AA seq
DB search
MPNPAVAAGDNVHLLYRAHHGWLHGWLRAKLGNSFDAADLAQDTFVRVLRHRHELDALRE
PRAYLTTIAKRLLLNHHRRRSVEQAYLEALALMPEALAPSAEQRLIILETLQEIDEMLAG
LSLPARQAFLMAQLEGLSHGEIAARLNVSLRTVHRYIAKGFEQCIMASI
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
gtgccgaatcccgcggtcgccgccggcgacaacgtccatctgctgtaccgcgctcatcat
ggatggctgcatggctggctgcgcgccaagctgggcaacagcttcgacgccgccgacctg
gcgcaggacaccttcgtgcgggtgctgcgccaccgccacgaactggacgccttgcgcgag
ccgcgcgcctatctcaccaccatcgccaagcgcctgctgctgaaccaccatcggcggcgc
tcggtggagcaggcctatctggaagccctggccttgatgccggaggcgctggcgccctcg
gccgagcagcgcctgatcatcctggaaacgctgcaggaaatcgacgagatgctggccggc
ctgtcgctgccggcccgccaggccttcctgatggcgcagctggaaggactgagccatggc
gaaatcgccgcccgcctgaacgtgtcgctgcgcaccgtgcatcgctacatcgccaaggga
ttcgaacaatgcatcatggcgtcgatctga
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