Achromobacter sp. PD1: ACM1PE_30900
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Entry
ACM1PE_30900 CDS
T11306
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
acpd Achromobacter sp. PD1
Brite
KEGG Orthology (KO) [BR:
acpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acpd03009
]
ACM1PE_30900 (rimO)
Enzymes [BR:
acpd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ACM1PE_30900 (rimO)
Ribosome biogenesis [BR:
acpd03009
]
Prokaryotic type
ribosomal protein modification factors
ACM1PE_30900 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XPR21511
LinkDB
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Position
complement(6546700..6548037)
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AA seq
445 aa
AA seq
DB search
MAAANADGRTPRVGFVSLGCPKALVDSERILTQLRTEGYVVTPEYNDADVVVVNTCGFID
SAKAESLEAIGEALAENGKVIVTGCMGVEESVIRDVHPSVLAVTGPQQYEEVVRAVHQAA
PPKKDHNPYLDLVPPQGIKLTPRHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVGDVLS
EAERLVKAGVKELLVISQDTSAYGVDMKYRSGFWNGRPVKTRMTELCMALSEMGVWTRLH
YVYPYPHVDEVIPLMAEGKILPYLDIPFQHASPRILKAMKRPAFEDKTLARIKRWREICP
DLTIRSTFIVGFPGETEEDFQYLLDWMQEAQLDRVGCFQYSPVEGAPANLLDNPVPDEVK
QERWERFMELQQSISSARLARKVGREIDVLIDEVDEDGAVGRSSADAPEIDGCVYVSSDK
PLKAGDLVRVRVTDSDEYDLWADAI
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atcgccgcggccaacgccgacggccgaaccccacgcgtgggcttcgtatccctgggctgt
cccaaagccctggtcgactccgaacgcatcctgacccagctgcggaccgaagggtacgtc
gtcacgcccgagtacaacgatgccgacgtggtcgtcgtcaatacctgcggcttcatcgac
agcgccaaggcggaatcgctggaggccatcggcgaagccctggccgagaacggcaaggtc
atcgtgaccggctgcatgggcgtcgaggaatcggtgatccgcgacgtgcaccccagcgtg
ctggccgtgaccggcccgcagcaatacgaagaggtggtgcgcgcggtgcaccaggccgcg
ccgcccaagaaggaccacaacccctatctggacctggtgccgccgcaaggcatcaagctc
acgccgcgccactacgcctatctgaagatctcggaaggctgtaatcaccgctgcagcttc
tgcatcatcccgtcgatgcgcggcgacctggtcagccggccggtgggtgacgtgctgagc
gaagccgagcgcctggtcaaggcgggcgtgaaggaattgctggtgatctcgcaagacacc
agcgcctatggcgtggacatgaagtaccgcagcggtttctggaacggccgtccggtaaag
acccgcatgaccgaactctgtatggccttgtccgagatgggcgtgtggacgcgcctgcac
tacgtgtatccgtacccgcacgtggacgaagtgatcccgctgatggccgagggcaagatc
ctgccctacctggacattccgttccagcacgccagcccgcgcatcctgaaggccatgaag
cgcccggccttcgaggacaagaccctggcccgcatcaagcgctggcgcgagatctgcccg
gatctgacgatacgctcgaccttcattgtcggcttccccggggaaaccgaggaagacttc
cagtacctgctggactggatgcaggaagcgcagctggaccgcgtgggctgtttccagtat
tcgccggtggaaggcgcacccgcgaacctgctggacaatccggtgccggacgaggtcaag
caggaacgttgggaacgcttcatggaactgcagcaatcgatctccagcgcccgcctggcc
aggaaggtgggccgcgagatcgacgtgctgatcgacgaagtggacgaagacggcgccgtg
ggccgcagcagcgccgacgcgccggagatcgacggctgcgtctacgtcagctcggacaag
cccctgaaggcgggcgacctggtgcgcgtgcgcgtcaccgattccgacgaatacgacctc
tgggccgacgcgatctga
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