Achromobacter sp. PD1: ACM1PE_32290
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Entry
ACM1PE_32290 CDS
T11306
Name
(GenBank) ribonuclease catalytic domain-containing protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
acpd Achromobacter sp. PD1
Brite
KEGG Orthology (KO) [BR:
acpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acpd03016
]
ACM1PE_32290
Enzymes [BR:
acpd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
ACM1PE_32290
Transfer RNA biogenesis [BR:
acpd03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ACM1PE_32290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_P-MRP_p29
Motif
Other DBs
NCBI-ProteinID:
XPR18037
LinkDB
All DBs
Position
complement(6838913..6840817)
Genome browser
AA seq
634 aa
AA seq
DB search
MYVFYEDDGSFKAGNILSETDASLQVESESGKRSKIKRANTLFTFASPEPAALMSQAAAT
AETLDLQFLWECAPQDEFDSPALAADYFGHAPTPVEQAALLMRLHGAPAYFHRRGKGRYR
PAPPDILAAALAALEKKQRQAEQQQEWVDEMAAGRLPEPIAQAAESLLIRPDKNSQQWKA
LDAACAKLGKSPDRLLLELGAWPHALALHKRRFLAVNFPRGLAFPDLELPAIDRELPLSD
AEIYSVDDVTTTEIDDALSVSTLPDGRLRVGVHVAAPGITVTRDSDFDKLARARLSTVYM
PGDKIPMQPDSIIQAFSLDAGREVPALSLYVVADPETGEIIESETRLERIVVRENLRHNM
LDAQVTEASLSDPSADLPYGHWLRPLWKLAQALSAQRENVRGKPENNSRVEYSFYLDGNP
DDPDTPVRLVPRQRNAPLDRMVAEYMILANNLWGGLLHQHGVPGIYRSQQAGRVRMSTQA
LPHEAIGVPQYAWSTSPLRRYVDLVNQWQLIAAVEHGVSARLVAPFKPRDADLFAIIGAF
DAQYAAWAEFQSAMERYWCLRWLKQHNVTRTVAHVLREDLVRFANAPLVTRVGGMPELER
GTAVEIDILGMDELSLELDCRYIGEISPAVGGQE
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtgttttacgaagacgacggcagcttcaaggccggcaatatcctgtccgagacc
gacgccagcctgcaggtggaatcggaatcgggcaagcgcagcaagatcaagcgcgccaat
accttgttcaccttcgcctcgcccgaaccggccgcgctgatgagccaggcggccgcgacc
gccgaaaccctggacctgcaattcctgtgggaatgcgcgccgcaggatgaattcgattcc
cccgcgctggccgccgactacttcggccacgcgcccacgccggtggaacaggcagcgctg
ctgatgcgcctgcacggcgcgccggcgtacttccatcgtcgcggcaagggccgttaccgc
cccgccccgccggacatcctggccgccgcgctggccgccctggagaaaaagcagcgccag
gccgagcagcagcaggaatgggtggatgaaatggctgccggacgcctgcccgagcccatc
gcccaggccgcggaatcgctgctgatccgccccgacaagaattcgcagcagtggaaggcg
ctggatgcagcctgcgccaagctgggcaagagccccgaccgcctgctgctggagctgggc
gcctggccgcacgcgctggcgctgcacaagcgccgcttcctggcggtgaacttcccgcgc
gggctggcgttcccggacctggaactgcctgccatcgaccgcgagctgccgttgtccgac
gccgaaatctattcggtggacgacgtcaccaccacggaaatcgacgacgcgctgtccgtc
tccaccctgcccgacggccgcctgcgcgtcggcgtgcacgtggcggcgccgggcatcacc
gtgacccgcgacagcgatttcgacaagctggcgcgcgcgcgcctgtccaccgtctacatg
ccgggcgacaagatcccgatgcagccggacagcatcatccaggcgttctcgctggatgcc
ggccgcgaagtgccggcgctgtccctgtacgtcgtggccgatccggaaaccggcgaaatc
atcgaatcggaaacccgcctggaacgtatcgtggtgcgcgaaaacctgcgccacaacatg
ctggacgcccaggtcacggaagccagcctgtccgatccgtcggccgacctgccctatggt
cattggctgcgcccgctgtggaagctggcgcaggccctgtcggcgcaacgcgaaaacgtg
cgcggcaagccggaaaacaattcgcgggtggagtacagcttctacctggacggcaacccc
gacgatcccgacacgccggtacgcctggtgccgcgccagcgcaacgcgccgctggaccgc
atggtggcggaatacatgatcctggcgaacaacctctggggcggcctgctgcaccagcac
ggcgtgccgggcatctaccgttcgcaacaggcgggccgcgtgcgcatgagcacccaggcc
ctgccgcacgaggccatcggcgtgccgcaatacgcctggagcacctcgccgctacgccgc
tacgtggacctggtgaaccagtggcagttgatcgctgcggtcgaacacggcgtgtccgcc
cgcctggtcgcccctttcaagccgcgcgacgcggacctgttcgccatcatcggcgcgttc
gatgcgcaatacgcggcctgggcggagttccagagcgcaatggaacgctactggtgcctg
cgctggctgaaacagcacaacgtgacccgcaccgtggcgcacgtgctgcgcgaggatctg
gtgcggttcgcgaatgcgccgctggtgactcgggtgggcgggatgccggagctggagcgg
gggactgcggtggagatcgatattctggggatggatgagttgtctctggagctggattgc
cggtatatcggggagattagtccggctgtgggcgggcaggagtag
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