Acinetobacter sp. P1332: ACFN7Z_15440
Help
Entry
ACFN7Z_15440 CDS
T11388
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
acpz Acinetobacter sp. P1332
Pathway
acpz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acpz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACFN7Z_15440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acpz03019
]
ACFN7Z_15440
03009 Ribosome biogenesis [BR:
acpz03009
]
ACFN7Z_15440
Enzymes [BR:
acpz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
ACFN7Z_15440
Messenger RNA biogenesis [BR:
acpz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACFN7Z_15440
Ribosome biogenesis [BR:
acpz03009
]
Prokaryotic type
rRNA processing factors
ACFN7Z_15440
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
XJO21223
LinkDB
All DBs
Position
3131289..3134771
Genome browser
AA seq
1160 aa
AA seq
DB search
MKRMLINATHAEEIRVALVTGQRLYDFDLENRTREQKKSNIYKGHVTRVEPSLEAVFVEY
GAGRQGFLSMREIANSYYKADPRQTSNIRELITEGTELLVQVEKEERGNKGAALSTFISL
AGRYLVLMPNNPKGGGISRQISGSVREELKEMLASLNVPRGMSVIVRTAGIGRSQEELQL
DLQHLLDLWAQIQNTASSGPSPMLVHQEAGVVTRAIRDYLRDDVAEILIDSEQAYNEAYN
FVKAVMPRQIDKLKTYTLNEPLFAHFGIESQIQTAYEREVKLPSGGSIVIDQTEALVSID
INSAKSTRGSDVEDTALNTNLEAAEEIARQLRLRDIGGLVVIDFIDMTKDRNQRMVEAKL
REATQSDRARIQFGQLSRFGLMEMSRQRLRPSLEEATGYVCPRCHGTGMVRDLRSLSLSI
MRKVEEIALRERHGEVQVQVPVEIAAFLLNEKRHTLVYLEQTSGVRVTVLPHPHLETPHY
EISYNPEGFAPTSYERTEATRLSEKELGYESSEWHLDGADHVHQHAAPAPAPAQQEKGNK
KPRNNAPQQQVAQQAPVQAAPSSSPCAWLENLFVQKQAATVDQSRSANNAAAAIEQMVNG
GAVSRGQFGQVGTPAVAPVAPSNNVYMSSAPVHAKSEHREDKHVEKEERGTRHNKKRPNK
HKESREQNAQHDNQVHEEIVQVSRQDQQRQDRYEQRPERNEPQRQDRHEQRSERSEQQRQ
DRSERSEQQRQEPRENKRSSRRQHGEQQQNTDVQNEQQNVMPRRDRRNQPRPERPNRHRD
PSVLNEQATEAAPAVVQEPQVKVELIEAPRQEMITTAHVVNVDQAQSEIVALTPPAHTET
KPQQAAVAKAEVEVKAEKVVQEKATEVVVAPAEQQAEQKPRESVKRASNDPRQRRRQQRA
AHTQQTETPKLTPSQVPTLGQYTISSLIRHVYGEDCSVLIEQFGLIPTFNRALQKFTEEY
AATLSKTVTTTAVEAEKKPVTRDVEITKAQPEAEPVPVLDLTPPAPVSEQRVANDPRERR
RLAKLAAEQAKQARETAPVAESSAPETAVVAETLAEEAAPVVTPQESEPVLATESEAPVA
VESSEVKSSADVAAVEEVEVVVAPVQAKAPRASKQAEKVEVTETVAETAADESDKSDSDK
PVRPRRPRGRPPKKASPTES
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtatgttgattaatgcaacacatgcagaagagattcgcgttgcacttgtcact
gggcagcgtctttacgattttgacttagaaaatcgtacccgtgaacaaaaaaaatccaat
atctataaaggtcacgtgactcgcgttgagccttctttagaagccgtctttgttgaatat
ggtgcgggacgtcaaggcttcttgtctatgcgtgaaatcgcaaactcttattacaaagct
gaccctcgccaaacttccaatattcgtgaactgattactgaaggcactgagcttttagta
caggtagagaaagaagaacgtggcaacaaaggtgctgcactctctaccttcatttcttta
gctggtcgctacttggtactcatgccaaacaacccgaaaggtggtggtattagccgtcaa
atttcaggttcagtacgtgaagaattgaaagaaatgttggcgtcgttaaatgtacctcgt
ggcatgagcgtaattgtacgtactgcgggtattggccgttctcaagaagaattacaactc
gacctacagcacttacttgatctttgggcgcaaatccaaaacacagcaagttctggtcca
tcaccaatgctggttcaccaagaagcaggcgtggtgacacgtgcgattcgtgattattta
cgtgatgatgttgctgaaatcttaattgattcagagcaagcctataacgaagcctataac
ttcgtaaaagcagtcatgcctcgtcaaatcgacaagttaaaaacctatacgctaaatgag
ccgttatttgcgcattttggtattgaaagccaaattcaaacagcttatgaacgtgaagtt
aaacttccttcaggcggttcaatcgttattgaccaaaccgaagcattagtgtcaattgac
attaactctgcaaaatcaacccgtggtagtgacgttgaagatacagcgctcaataccaac
cttgaagcagcggaagaaattgcacgtcaactgcgtttacgtgacattggtggtttggtt
gtaatcgactttatcgacatgaccaaagaccgtaaccaacgtatggttgaagcgaaactt
cgcgaagcaacacaaagcgatcgtgcccgtatccaattcggtcaattgtctcgttttggc
ttgatggaaatgagccgtcaacgtctacgcccttcgcttgaagaagcaacaggttatgtc
tgcccgcgctgtcatggcacaggtatggtgcgtgacttgcgttcattatcgctttcaatt
atgcgtaaagttgaagaaattgcgctgcgcgaacgtcatggggaagttcaagtacaggtt
cctgttgaaattgcagcattcttattgaatgaaaagcgtcacacgttggtttacctcgaa
caaacctcaggtgttcgtgtgacagtgcttccgcacccacacttagaaaccccacattac
gaaatttcgtataaccctgaaggctttgcaccaaccagctatgagcgtacagaagcaaca
cgtttaagcgaaaaagagttgggttacgagtcatcagaatggcatttagatggtgcagat
catgtgcatcaacatgctgctcctgcacctgcacctgcacaacaagaaaaaggcaacaaa
aaaccacgtaacaacgcgccacaacaacaagttgcgcaacaagcccctgttcaagctgca
ccatcaagtagcccatgtgcatggctagagaacttgtttgtacaaaaacaagctgcgact
gtcgatcaatcacgttctgcaaataatgctgctgctgccattgagcaaatggtgaatggt
ggtgcagtgagccgtggtcagtttggtcaagttggcacgcctgctgtggcacctgtcgcg
ccaagcaacaatgtctacatgagctctgcacctgttcatgcaaaatctgaacaccgtgaa
gataagcatgtagaaaaagaagaacgcggcacacgccacaacaaaaagcgccctaataag
cacaaagagtcacgtgagcaaaatgcgcaacatgacaaccaagttcatgaagaaattgtg
caggtctctcgtcaagatcaacagcgccaagatcgttatgaacaacgccctgaacgcaat
gaaccacaacgccaagaccgtcatgaacaacgctctgagcgcagtgaacaacaacgtcaa
gaccgctcagagcgcagtgaacagcaacgtcaggaaccgcgtgaaaacaagcgttcatca
cgtcgccaacacggtgaacaacagcaaaacactgatgttcaaaacgaacagcaaaatgta
atgccacgtcgtgaccgccgtaaccaacctcgtccagagcgcccaaatcgccaccgcgat
ccaagtgtattaaatgagcaagcgactgaagcagcgccagctgtggttcaagaacctcaa
gttaaagttgagttgattgaagcaccgcgtcaagaaatgatcacaacagcccatgtggtc
aatgtcgatcaagcgcaaagtgaaatcgtggcattaactccgcctgcacacaccgaaacc
aagcctcagcaagctgctgttgcgaaagcagaagttgaagtaaaagctgagaaagtggta
caggagaaagcaactgaagttgtagtagcacctgctgaacaacaagcagagcaaaaacca
cgtgaaagcgtaaaacgtgccagcaatgacccacgccaacgccgtcgccagcaacgcgct
gcacacacacagcaaactgaaacacctaaactcacaccttcacaggtgccaactttaggt
cagtacaccatcagcagcttgattcgccatgtctatggtgaagactgttcagtgctgatt
gagcagtttggtttaattccaaccttcaaccgtgcccttcagaaatttactgaagagtat
gcagcaacgttaagcaaaactgtgacaacgactgctgttgaagcagagaaaaaaccggtc
acccgtgatgttgaaatcacaaaagcgcagcctgaagcagagccagttccagtattggac
ctgacaccgcctgcacctgtgtctgaacaacgtgttgcaaatgacccgcgtgagcgtcgt
cgtttagctaaacttgctgctgaacaagccaaacaagcacgcgaaacagcacctgttgct
gaatcgtcagcgcctgaaacagcggttgttgcagaaacgcttgctgaagaagctgcaccc
gttgtaactccacaggaaagcgaacctgttcttgcaacagaaagcgaagcgcctgttgcc
gttgaaagcagcgaagtgaaaagctcagctgatgtagctgcggttgaagaagtggaagtt
gttgttgctccagttcaagccaaagcgcctagagcgtcaaagcaagctgaaaaagtagaa
gtaactgaaactgtagcggaaacagctgcggatgagtcagacaaatcagactcggacaag
ccagttcgcccacgtcgtccacgtggtcgtccaccgaaaaaagcgagcccgactgagtcg
taa
DBGET
integrated database retrieval system
