Actinomyces sp. oral taxon 414: AM609_07085
Help
Entry
AM609_07085 CDS
T04083
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
acq
Actinomyces sp. oral taxon 414
Pathway
acq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AM609_07085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acq03019
]
AM609_07085
03009 Ribosome biogenesis [BR:
acq03009
]
AM609_07085
Enzymes [BR:
acq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AM609_07085
Messenger RNA biogenesis [BR:
acq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AM609_07085
Ribosome biogenesis [BR:
acq03009
]
Prokaryotic type
rRNA helicases
AM609_07085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
CMS1
ResIII
Cas3-like_C_2
adh_short
Motif
Other DBs
NCBI-ProteinID:
ALC99310
LinkDB
All DBs
Position
1732662..1735325
Genome browser
AA seq
887 aa
AA seq
DB search
MSNDTGATAPSEQSADGPLSLDDLFKAELASGQAADSDRPTDSDSDQPAASDQAADHPDS
PEDLASPHRVEPGSPVSATSFDTPASSDSPEDPEGIEHEDEADDVDLALDERDPEAEDPE
ADDGADDPEIDEEDVDGHAPFADTGDEEADGAEPDAKAPEEISFADLGLPDDLLKAVTDM
GYVTPTAIQREAIPVLLAGRDVVGVAQTGTGKTAAFGLPLLDAVDAREPVVQALVLAPTR
ELALQSADAIADMAHRSRGLDVVAVYGGAPYGPQIGALRDGAQVVVGTPGRIIDLIDKGA
LVLDDVTYFVLDEADEMLRMGFAEDVETIAASLPEERRTSLFSATMPPAIQRVARQHLTD
PVRIEVSPQASTVDTVHQTYAVVPFRHKIGAVSRVLAVTDAEAALVFVRTKSTAEDVAIE
LAGRGIQASAISGDVPQRERERLVERLRAGTLDVLVATDVAARGLDVDRIGLVVNFDVPR
EAEAYVHRIGRTGRAGRHGEAVTFLTPKEKRKLRQIERLTGTRLEEITLPSPADVSFHRA
GKLLERAATRHERGRLAMYTDLVNAKAAELGIDETSLAATLLALAVGDEGPRRREGGEER
EGREGREERPRPRGRREENLDAEGDFVSASFEGGRDREDRGGRRRDRFEGKPGASRGGRR
HEEGTGTVYRIEVGRRDHVQPGAIVGALANEGGIAGSDIGRIDILQSFSLVEIHTPLSPE
QLKTMGRATFSGRELRIRLDEGPGSGWDGPNDASSGRRLFRSHSDRGDRGGREGDRGQRW
SNRDERRGGFRDGDRGGFRGGRDERRGGARGGFGRDERGDRGGREGDRGQRWSNRDERRG
GFRDGDRGGFRGGRDERRGGARGGFGRDERGDRGDRGGFRGGRKDRW
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgacaccggggccactgcgccctccgagcagtccgccgacggcccgctgagt
ctcgacgacctcttcaaggccgagctggcctccggacaggcggccgactccgaccggccg
actgactctgactccgaccagccggccgcctccgaccaggcggccgaccaccccgactcc
cccgaggacctggcctccccgcaccgcgtcgagcccggctccccggtctccgcgacctcc
ttcgacacgcccgcctcctccgactcccccgaggaccccgaggggatcgagcacgaggac
gaggccgacgacgtcgacctggccctggacgagagggacccggaggccgaggacccggag
gccgacgacggcgccgacgaccccgagatcgacgaggaggacgtcgacggccacgcgccc
ttcgccgacaccggcgacgaggaggccgacggcgccgagccggacgccaaggcccccgag
gagatctccttcgccgacctcggcctgcccgacgacctgctcaaggccgtcaccgacatg
ggctacgtgacgcccaccgccatccagcgcgaggccatcccggtcctgctggccgggcgc
gacgtcgtcggcgtcgcccagaccggcaccggcaagaccgccgccttcggcctgcccctg
ctcgacgccgtcgacgcccgcgagcccgtcgtccaggccctggtcctggcccccacccgc
gagctggccctccagagcgccgacgccatcgccgacatggcccaccgctcgcgcggcctg
gacgtcgtcgccgtctacggcggcgccccctacggcccgcagatcggggcgctgcgcgac
ggcgcccaggtcgtcgtcggcacgcccgggcgcattatcgacctcattgacaagggcgcc
ctggtcctggacgacgtcacctacttcgtcctcgacgaggccgacgagatgctgcgcatg
ggcttcgccgaggacgtcgagaccattgccgcctccctgcccgaggagcggcgcacctcc
ctgttcagcgcgaccatgccgccggccatccagcgcgtggcccgccagcacctgaccgac
ccggtccggatcgaggtctcgccccaggcctccacggtcgacaccgtccaccagacctac
gccgtcgtccccttccgccacaagatcggcgccgtctcccgcgtcctggccgtcaccgac
gccgaggccgccctcgtcttcgtgcgcaccaagtccacggccgaggacgtcgccatcgag
ctggccgggcgcggcatccaggcctccgccatctccggcgacgtgccccagcgcgagcgc
gagcgcctcgtcgagcgcctgcgcgccggcaccctcgacgtgctcgtggccactgacgtg
gccgcccgcggcctggacgtggaccgcatcggtctggtcgtcaacttcgacgtgccccgc
gaggccgaggcctacgtccaccgcatcggccgcaccggccgcgccggccgccacggcgag
gccgtcaccttcctgactcccaaggagaagcgcaagctccgccagatcgagcgcctgacc
ggcacccgcctggaggagatcaccctgccctcgccggccgacgtctccttccaccgcgcc
ggcaagctgctggagcgggccgccacccgccacgagcgcgggcgcctggccatgtacacc
gacctcgtgaacgccaaggccgccgagctgggcattgacgagacctccctggccgccacc
ctgctcgccctggccgtgggcgacgaggggccgcgccgccgcgagggcggcgaggagcgc
gagggacgcgagggacgcgaggagcgcccgcgtccgcgggggcgccgcgaggagaacctc
gacgccgagggcgacttcgtctccgcctccttcgagggcgggcgcgaccgggaggaccgc
ggcgggcgccgtcgggaccgcttcgagggcaagcccggcgcatcccgcgggggacggcgc
cacgaggagggcacgggcaccgtctaccggatcgaggtcggccgtcgcgaccacgtccag
cccggcgcgatcgtgggggccctggccaacgagggcggcatcgccggatccgacatcggc
aggatcgacatcctgcagtccttctccctggtggagatccacaccccgctcagccccgag
cagctcaagacgatgggccgggcgaccttcagcggccgcgagctgcgcatccgcctcgac
gagggccccggctccggctgggacggcccgaacgacgcgtcctccgggcgccgcctcttc
cgctcccacagcgaccgcggcgaccgcggtgggcgcgagggcgatcgcggtcagcgctgg
tcgaaccgcgatgagcgccgggggggcttccgcgacggcgatcgcggcggcttccgcggt
gggcgcgacgagcggcgcggcggcgcccgcgggggcttcggacgcgacgagcgcggcgac
cgcggtgggcgcgagggcgatcgcggtcagcgctggtcgaaccgcgatgagcgccggggg
ggcttccgcgacggcgatcgcggcggcttccgcggtgggcgcgacgagcggcgcggcggc
gcccgcgggggcttcggacgcgacgagcgcggcgaccgcggcgaccgcggcggcttccgc
ggtgggcgcaaggaccgctggtga
DBGET
integrated database retrieval system
