Actinomyces sp. oral taxon 414: AM609_12085
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Entry
AM609_12085 CDS
T04083
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
acq
Actinomyces sp. oral taxon 414
Pathway
acq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AM609_12085
09124 Replication and repair
03420 Nucleotide excision repair
AM609_12085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acq03021
]
AM609_12085
03400 DNA repair and recombination proteins [BR:
acq03400
]
AM609_12085
Enzymes [BR:
acq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AM609_12085
Transcription machinery [BR:
acq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AM609_12085
DNA repair and recombination proteins [BR:
acq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AM609_12085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ALD00008
UniProt:
A0A0M5JS08
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All DBs
Position
3006307..3007995
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AA seq
562 aa
AA seq
DB search
MPADAQPPAPDGPLIVQSDKSVLLEVARPGADEARRAIAPFAELERAPEHVHTYRITPLA
LWNARAAGLDAETVVHTLITYSRFPVPHALLTEIAETMGRYGRLQLVADPAHGLVLHAAD
APVLEEVMRSRRTTGLLGARLSPADVVVHPSERGHLKQVLIKLGWPAEDLAGYVDGEAHP
IALREDPAGARAGTPGAFALRPYQREAVEGFWAGGSGVVVLPCGAGKTLVGAAVMARSST
TALVLVANAVAARQWKEELMRFTTLTADEIGEYSGARKEIRPVTIATYQVLTTRRKGVHP
HLDLLDSHDWGLIVYDEVHLLPAPVFRMTADLQARRRLGLTATLVREDGREDEVFSLIGP
KRYDAPWKDLENQGWIAPAICTEVRLDLDARQRMTYATAEASDRYRLAACAPAKVGIVDR
LLARHAGESVLIIGQYVDQLTEIAEHLGAPLITGATTVRERQRLYGAFRSGEVRTLVVSK
VANFSIDLPGASVAVQVSGTFGSRQEEAQRLGRIVRPKEDGRQAHFYTVVARDTVDQEFA
AHRQRFLAEQGYTYDIVDAGDL
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctgacgcccagccccccgcgcccgacggccccctcatcgtccagtccgacaag
tcggtcctcctggaggtcgcccgccccggcgccgacgaggcccgccgcgccatcgccccc
ttcgccgagctggagcgggccccggaacacgtccacacctaccggatcaccccgctggcc
ctgtggaacgcccgggccgccgggctggacgccgagaccgtggtccacaccctcatcacc
tactcgcgcttcccggtgccccacgccctgctcaccgagatcgccgagaccatgggccgc
tacggccgccttcagctggtcgccgacccggcccacggcctggtcctgcacgccgcagac
gcgccggtcctggaggaggtcatgcgctcccggcgcaccacgggcctgctgggcgcgcgc
ctgtcccccgccgacgtcgtcgtccacccctccgagcgcggccacctcaagcaggtcctc
atcaagctgggctggccggcggaagacctggccggctacgtcgacggcgaggcccacccc
atcgccctgcgcgaggacccggccggggcccgggccggcacccccggggccttcgcgctg
cgcccctaccagcgcgaggcggtggagggcttctgggcgggcgggtccggcgtcgtcgtc
ctgccctgcggggccggcaagaccctggtgggggcggcggtcatggcgaggagttcgacg
acggcgctcgtcctggtcgccaacgccgtcgccgcccgccagtggaaggaggagctcatg
cgcttcaccaccctgaccgcggacgagatcggcgagtactcgggggcgcgcaaggagatc
cgccccgtgaccatcgccacctaccaggtgctcaccaccagacgcaagggcgtccacccg
catctggacctgctggactcccacgactgggggctcatcgtctacgacgaggtccacctc
ctgcccgcccccgtcttccgcatgacggcggacctgcaggcgcgccgccgcctgggcctg
accgccaccctcgtgcgcgaggacggccgcgaagacgaggtcttctccctcatcggcccc
aagcgctacgacgccccctggaaggacctggagaaccagggctggatcgccccggccatc
tgcaccgaggtgcgcctggacctggacgccaggcagcgaatgacctacgcgacggcggag
gcgtccgaccgctaccgcctggccgcctgcgccccggccaaggtcgggatcgtggaccgg
ctgctggcccgccacgccggcgagtcggtgctgatcatcggccagtacgtcgaccaactg
accgagatcgccgagcatctgggcgccccgctcatcacgggggcgacgacggtgcgcgag
cgccagcgcctctacggcgccttccgctccggggaggtgcgcaccctcgtggtctccaag
gtggcgaacttctccatcgacctgcccggggcgagcgtggccgtccaggtgtcggggacc
ttcgggtcccggcaggaggaggcccagcgcctgggccggatcgtgcggcccaaggaggac
gggcgccaggcgcacttctacacggtcgtggcccgcgacacggtcgaccaggagttcgcg
gcgcatcgccagcgcttcctggccgagcagggctacacctacgacatcgtcgacgccggg
gatctgtag
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