Acidiphilium cryptum: Acry_0037
Help
Entry
Acry_0037 CDS
T00527
Name
(GenBank) RNAse R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
acr
Acidiphilium cryptum
Pathway
acr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Acry_0037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acr03019
]
Acry_0037
03016 Transfer RNA biogenesis [BR:
acr03016
]
Acry_0037
Enzymes [BR:
acr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Acry_0037
Messenger RNA biogenesis [BR:
acr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Acry_0037
Transfer RNA biogenesis [BR:
acr03016
]
Prokaryotic type
tRNA degradation factors
Acry_0037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
S1
Motif
Other DBs
NCBI-ProteinID:
ABQ29266
UniProt:
A5FUI4
LinkDB
All DBs
Position
34256..36493
Genome browser
AA seq
745 aa
AA seq
DB search
MTRKPVRRSAELPTEAVLREFIAEAGTRLRKGDIARAFGLGPDQKPALRAMLRNLERDGM
LVRAGGRQVRAAEALPERCVVEITGTDRDGDPLARPVGWDRQGKPPIIFMLPEKRGHAAL
APGARVLARLRRIDDDRYEGRTVRRLDEEPASIIGVFRAEGEGGWIEPVDRKSRAEWKVP
PGETAGAESGDVVRAMPLPAFGYRPKPARIAEHLGRMGDARSISLIAIAALGIPADFPET
AIDEAKRARGVRPGRRTDLREVPLVTIDGADARDFDDAVFAEPAGPGHRIVVAIADVAHY
VRPGSALDREALKRGNSVYFPDRVVPMLPEALSNGWCSLRPGEDRGCLFVEMIVDAEGRK
LSHQFGRGLMRSFARLTYEEVQGAFESGWEADLPDGTIDHLYAAYRTLLAARQARGTLDL
DLPERKITLDEAGRVTDVAPRPRLDSHRLIEEFMILANVAAAEELERLRQPCMYRVHAPP
SPEKLDSLRNLLATFEISLKPGDQLHPRDLDHVLRLVAGSDAAPLVNEAVLRSQSQAEYA
PENIGHFGLALNSYAHFTSPIRRYADLLVHRALIAGLKLGTDGLRPEHADGFETIAAAIT
STERRATDAERQSADRYLAAYLADRIGEDFGARVSGVTRFGLFVTLDATGASGFVPMALL
PDDFWHFDEADGTLSGTRSRVVFRLADPVLVRLREAKPVTGGLLFTLIEGGSAPGEGGGQ
HRRLPARKGGRKPGRAPARHKRSRR
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgacccggaagcccgtccgccgatccgccgaactgccgaccgaggctgtgctgcgcgag
ttcatcgccgaagctggaacccggctgcgcaagggcgacattgcccgcgccttcggcctc
ggccccgaccagaaaccggcgctgcgggcgatgctgcggaatctcgaacgcgatggcatg
ctggtccgcgccggcgggcggcaggtgcgcgcggccgaggcgctgccggaacgctgcgtc
gtcgagatcaccggcaccgatcgtgacggcgacccgcttgcccggccggtcggctgggac
cggcagggcaagccgccgatcatcttcatgttgcccgaaaagcgcggccacgctgcgctc
gcgcccggcgcgcgggtgctggcccggctgcgacggatcgacgacgaccgttacgaaggc
cgcacggtccggcggctcgacgaggagccggccagcatcatcggcgtgttccgcgccgag
ggagagggcggctggatcgagccggtggaccgcaagagccgcgccgaatggaaggtgccg
ccgggcgaaaccgccggtgccgaaagcggcgacgtggtgcgcgccatgcccttgccggcc
ttcggctacaggccgaagccggcgcggatcgccgagcatctcggccggatgggcgatgcg
cgctcgatcagcctgatcgccatcgcggcactggggattccggccgacttcccggagacc
gcgatcgacgaggcgaagcgcgcccgcggcgtccgccccggccggcggaccgatctgcgc
gaagtgccgctggtgacgatcgacggcgccgatgcgcgcgacttcgatgacgccgtcttc
gccgaacccgccgggccggggcatcgcatcgtcgtcgccatcgccgatgtcgcgcattac
gtgcgccccggctcggcgctcgaccgcgaggcgctgaagcgcggcaactcggtctatttc
cccgaccgcgtggtgccgatgctgcccgaggcgctctccaacggctggtgcagcctgcgg
ccgggcgaggacaggggatgcctgttcgtcgagatgatcgtcgacgccgagggccgcaag
ctgagccaccaattcggccgcggcctgatgcgcagcttcgcccgcctcacctacgaggag
gtgcagggcgccttcgagtccggctgggaagccgatctgccggacgggacgatcgaccat
ctctacgccgcctatcgcacgctgctggcggcgcggcaggcccgcggcacgctcgatctc
gacctgccggagcgcaagatcacgctcgacgaggctggccgggtgacggacgtggcgccg
cgcccgcggctcgacagccaccggctgatcgaggagttcatgatcctcgccaatgtcgcg
gcggcggaggagctggaacggctgcgccagccgtgcatgtatcgcgtgcacgccccgccc
tcgccggaaaagctcgattcgctgcgcaatctgctggcgacgttcgagatttcgctcaag
cccggcgaccagctccacccgcgcgaccttgatcatgtgctgcgccttgtcgccggtagc
gatgcggcgccgctggtgaacgaggcggtgctgcgcagccagagccaggcggaatacgcg
ccggagaatatcggccatttcggcctggcgctgaacagctacgcgcatttcacctcgccg
atccgccgctatgccgatcttctggtccatcgcgcgctcatcgccgggctgaagctcggc
accgacgggctgcgtcccgaacacgccgacggattcgaaaccatcgcggcggcgatcacc
tcgaccgagcgccgcgccaccgatgccgagcggcaatcggccgaccgctatcttgccgcc
tatctggccgaccggatcggcgaggatttcggcgcgcgggtcagcggggtgacgcggttc
ggcctgttcgtcacgctcgatgcgaccggcgcgtccggtttcgtgccgatggcgctgctg
cccgacgatttctggcatttcgacgaggccgatggcacgctgtccggcacccgctcgcgc
gtggtgttccgcctggccgatccggtgctggtgcggctgcgcgaggcgaagccggtgacc
ggcgggctgctgttcaccctgatcgagggcggcagcgcgccgggcgagggcggtggacaa
catcgccggttgccggcccgcaagggcggcaggaagccgggccgcgcgcccgccaggcac
aagcgcagccgccgatga
DBGET
integrated database retrieval system
