Acidiphilium cryptum: Acry_0388
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Entry
Acry_0388 CDS
T00527
Name
(GenBank) RNAse E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
acr
Acidiphilium cryptum
Pathway
acr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Acry_0388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acr03019
]
Acry_0388
03009 Ribosome biogenesis [BR:
acr03009
]
Acry_0388
Enzymes [BR:
acr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
Acry_0388
Messenger RNA biogenesis [BR:
acr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Acry_0388
Ribosome biogenesis [BR:
acr03009
]
Prokaryotic type
rRNA processing factors
Acry_0388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
ABQ29613
UniProt:
A5FVI1
LinkDB
All DBs
Position
444903..447623
Genome browser
AA seq
906 aa
AA seq
DB search
MTKTMLIDASHAEETRVVVLDNNRLDDFDIEAADRKQIKGNIYLAKVIRVEPSLQAAFVE
YGGNRHGFLAFAEIHPDYYQIPVADRQKLLELEAEEARRRVEAEDAEDEQEAALAAPRPP
RVTEIAIGDAPPDAEGQVDAEAAAAPAEVGEAEADSGPEASGAGAGEDRAGEGAEATATP
PEQVGGDDGVDGAEEAQERRRLRALRSYKIQEVIHRRQIMLVQVVKEERGSKGAALTTYI
SLAGRFSVLMPNSPNGGGVSRKITSLADRRRLKEAIAELEIPQGMGMIVRTAGANRPKPE
IKRDCEYLLRLWDDIRERTLASIAPALVYEEASLIKRTIRDVYTRDVDQVLIEGEDGFRS
ARDFMRMLMPTHVKKVQQWTERQPLFAKHNVEQMLDQMFQPTVQLKSGGYLVINQTEALV
AIDVNSGRATRERNIEDTALRTNLEAAEEVARQLRLRDLAGLIVVDFIDMETRKHNAMVE
RRLKDALKNDRARIQVGSISHFGLLEMSRQRLRPSLAETMLIACPHCQGVGHVRSTASTA
LAVLRAIEDEAARQAAELLVHLTPDVALYIFNHKRAQIAATEARFGMKVVFVADGTVPAT
FKIEKVKAHAARPQETPAPTFRAPAETEEVEAEQQGDEVATEDAAGNAGKAADEVERRRR
RRRRRRGGRREDLVSAPTGEQPEIAGIPAEFESRMNDVLPTAARADAAEAPAPEVTMEPA
VAETAPAVPEPAKEPKVVETSPAATEAAPSLAGEVPAPEAEAETKPKRRAPTGPRSPTTR
RRRAAASQAAEPEVQQPVFTDIADIFEAAEQAEALAPKPRRTRRPKARPMEAETAVADAP
ATTEAVAEVSAAPQDGSASAGNVAGAEAPVANEGQAAPGAAVQPVLIGASETPTAARKRG
WWKRPA
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagaccatgctcatcgacgccagccacgcggaagaaacccgcgttgtggtgttg
gacaacaaccgcctcgatgatttcgatatcgaggctgccgacaggaagcagatcaagggc
aacatctacctcgcgaaagttatccgggtagagcccagcctacaggccgccttcgtcgaa
tacggcggcaaccggcacgggtttctcgccttcgccgagattcatcccgactattatcag
atccctgtcgccgaccggcagaagctgctggaactcgaggcggaggaggcgaggcgccgc
gtcgaggccgaggatgccgaggacgagcaggaggcggcgctcgcggcgccgcggccgccg
cgggtgacggaaatcgcgatcggcgacgcgccgccggatgccgagggccaggttgacgcc
gaggccgccgccgcgccggctgaggtcggtgaggccgaggcggactccggacctgaagcc
agtggcgccggcgcgggcgaggaccgggcgggggagggcgcagaggcgacggcgaccccg
cccgagcaggtcggcggggatgacggcgtcgacggcgcggaggaggcgcaggagcgccgc
cggctgcgcgccctgcgctcgtacaagattcaggaagtgatccatcgccggcagatcatg
ctggtgcaggtggtgaaggaggagcgcggctcgaaaggcgcggcgctgaccacctatatt
tcgcttgccggccgcttttcggtgctgatgccgaattcgccgaatggcgggggcgtgtcg
cgcaagatcacctcgctggctgatcgtcgccggctgaaggaggcgatcgccgagctcgag
attccgcagggcatgggcatgatcgtccgcaccgccggcgcgaaccggccgaagccggaa
atcaagcgcgactgcgaatatctgctgcggttgtgggacgatatccgcgagcgtaccctg
gcctcgatcgcgccggcgttggtgtatgaggaggcctcgctgatcaagcggaccatccgc
gacgtctatacccgcgacgtggaccaggtgctgatcgagggcgaggacggattccgctcg
gcgcgcgacttcatgcggatgctgatgccgacgcatgtgaagaaggtccagcaatggacc
gagcggcagccgctgttcgccaagcacaatgtcgagcagatgctcgaccagatgttccag
ccgacggtgcaactgaagtccggcgggtatctggtgatcaaccagaccgaggcgctggtt
gcgatcgacgtgaactcgggccgggcaacgcgggagcggaatatcgaggataccgcgctg
cggaccaatctggaggcggcggaggaagtggcgcggcagttgcgcctgcgcgacctcgcg
gggctgatcgtggtcgatttcatcgacatggagacccgcaagcacaacgcgatggtcgag
cggcggctgaaggatgcgctgaaaaacgaccgcgcgcgcattcaggtgggcagtatcagc
catttcggcctgctggaaatgagccgccagaggctgcggccgtcgctggccgagaccatg
ctgatcgcctgcccgcattgccagggcgtggggcatgtgcggagcacggcgagcaccgca
ctcgcggtgttgcgcgcgatcgaggacgaggcggcgcgccaggccgccgagttgctggtg
cacctgactccggatgtcgcgctctatatcttcaatcacaagcgtgcgcagattgccgcc
accgaggcgcggttcggcatgaaggtcgtcttcgtcgcggatggcaccgttccggccacc
ttcaagatcgagaaggtgaaggcgcatgcggcgcggccgcaggaaacgccggcgccgaca
ttccgtgcgccggccgagacggaggaggtcgaggcagagcagcaaggtgacgaggtcgcg
acggaggacgccgccggcaacgcaggaaaggcggccgatgaggtcgaacgccgccgccgc
cgccgccgccgccgccgtggcggccgtcgggaggacctggtgtccgcgcccactggcgag
cagccggagatcgccggaataccggccgagttcgagtcgcgcatgaacgacgtgttgccg
accgccgcccgtgccgatgcggctgaagcgccggcaccggaagtcacgatggagccggcc
gtcgccgagactgcgccggccgttcctgagcccgcaaaggaacccaaggtcgtggagacg
tcaccggccgccacggaggccgctccgtcccttgccggcgaagtgccggcgccggaagcg
gaggcagagacaaagccgaagcgtcgagcgcccaccggcccgcgtagcccgacgacccgg
cggcggcgcgccgctgcgtcgcaggccgccgagcctgaggttcagcaaccggtcttcacc
gatatcgcggatatttttgaggctgccgaacaggcggaagccctcgcgcccaagccccgc
cggacccgtcggccgaaggcaaggcccatggaagcggagactgcggtggctgacgcgcct
gcaaccaccgaagcagtcgccgaggtgagcgccgcgccgcaggatggctcggcgtctgcc
gggaatgtcgctggcgccgaagcgcctgttgccaatgaagggcaggcagcaccaggggcg
gcggtgcaacccgttctgattggtgccagcgaaacgccgaccgccgcgcgcaagcgcggc
tggtggaagcgcccagcctga
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