Acidiphilium cryptum: Acry_1166
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Entry
Acry_1166 CDS
T00527
Name
(GenBank) Collagen triple helix repeat protein
KO
K06236
collagen type I alpha
Organism
acr
Acidiphilium cryptum
Pathway
acr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
Acry_1166
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
acr00536
]
Acry_1166
Glycosaminoglycan binding proteins [BR:
acr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
Acry_1166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Hint_2
Motif
Other DBs
NCBI-ProteinID:
ABQ30378
UniProt:
A5FXP6
LinkDB
All DBs
Position
complement(1299633..1302785)
Genome browser
AA seq
1050 aa
AA seq
DB search
MSSSITVSPATGNYGDVVLSGNYQDCNTPLVAVLVTSNGTYTQIGLIYDFNDSTNDDDTS
NNGGGDPFTLTVSLPTGTYSVYSNSSGKDISDVPISSGSQGTIVFINPSSPDQVTSLVTS
LSISSVGSLGPTGATGAAGATGATGATGATGATGATGATGAMGATGATGATGATGATGAT
GAMGATGATGAMGATGATGATGATGATGATGATGATGATGATGATGATGAMGATGATGAT
GATGATGATGATGATGATGATGATGATGATGATGATGATGVTGATGATGATGATGAMGAT
GATGAMGATGATGAMGATGATGATGATGATGATGATGATGATGATGATGATGAMGATGAM
GATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGVTGATGAMGAT
GATGATGATGATGAMGATGATGATGATGATGAMGATGATGATGATGATGAMGATGATGAM
GATGATGATGATGATGATGATGATGATGATGATGATGATGAMGATGATGATGATGATGAT
GATGAMGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGAT
GVTGATGAMGATGATGATGATGATGATGATGATGATGATGATGATGATGATGAMGATGAT
GATGATGATGATGATGATGATGATGAMGATGATGATGATGAMGATGATGATGATGAMGAT
GATGATGATGATGATGATGATGATGATGGNPCFAEGTRIATVRGDVPVEELVAGDVVVLH
DGGTAPVVWLGYRTIDLDRHARPEAVQPIVIDAGAIADGIPVRDLIVSPDHAFYLDGVLI
PAKALVNGATIRQLRRSQVTYFHVELPQHAVLLAEGMAAESYLETGNRPAFENGGDAIIL
HPDFAQALRETGSCAPFAEEGAIVERVRARILARAGIETTDDADLKIRYRADGAAVITSR
TAIPGYLTPDPRDRRVLGVKIGAMMLGDEPIALDHPALTEGWHDVEADGRWTGGAAVVPA
SLINGRTLTITVVGTLAYPAHGANRSVEAG
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagttcgattactgtaagtcccgcgacgggaaactacggcgatgttgttttgagc
ggaaattatcaagattgtaacacgcctcttgtggccgtactggttacgtcgaacggcact
tatactcaaatcggtctcatttatgacttcaatgatagcacaaatgatgatgacacgtcg
aataatggtggtggagatccatttactttaactgtttctctgcctaccggaacatattcc
gtatattcgaatagttctggaaaagatatcagtgacgttccgataagctcgggcagtcaa
ggcacgatcgtttttattaatccgtcttctcctgaccaagtcacaagcttggtgacgtct
ctgtctatttcatccgtaggatcgctgggtccgacgggcgctacgggtgccgccggcgca
actggagccacgggtgccaccggcgcgacgggtgccacgggcgcgacgggtgccaccggc
gcgatgggtgccaccggcgcaacgggtgcgacaggcgccacgggcgcaacgggtgccacc
ggcgcgatgggtgccaccggcgcaacgggcgcgatgggtgccacgggtgcgacgggtgcc
acaggcgccacgggcgcgacgggcgccaccggcgcgacgggtgccacgggcgccaccggc
gcaactggagccacgggcgccacgggcgcgatgggtgccacgggtgcgacgggtgccaca
ggcgccacgggcgcgacgggtgccaccggcgcgacgggtgccacgggcgccaccggcgcg
acgggtgccacgggcgcgacgggtgccaccggcgcaacgggcgcaaccggagccaccggc
gtgacgggtgccaccggcgcaacgggtgccaccggcgcgacgggcgcgatgggtgccacg
ggcgcaacgggcgcgatgggtgccaccggcgcaacgggcgcgatgggtgccacgggtgcg
acgggtgccacaggcgccacgggcgcgacgggcgccaccggcgcgacgggtgccacgggc
gccaccggcgcaactggagccacgggcgccacgggcgcgatgggcgccacgggcgcgatg
ggtgccacgggtgcgacgggtgccacaggcgccacgggcgcgacgggtgccaccggcgcg
acgggtgccacgggcgccaccggcgcgacgggtgccacgggcgcgacgggtgccaccggc
gcaacgggcgcaaccggagccaccggcgtgacgggtgccacgggcgcgatgggtgcgacg
ggtgccacgggcgcaacgggtgccaccggcgcaacgggcgcgatgggtgccacgggtgcg
acgggtgccacgggtgcgacgggtgccaccggcgcgatgggtgccacaggcgccacgggc
gcgacgggtgccacgggcgccaccggcgcgatgggtgccaccggcgcaacgggcgcgatg
ggtgccacgggtgcgacgggtgccaccggagccacgggcgcaaccggagccaccggagcc
accggcgcgacgggtgccacaggcgccacgggcgcgacgggtgccacgggcgcaacgggt
gcgatgggtgccacgggcgcgacgggtgcgacgggtgccaccggcgcaacgggtgccacc
ggcgcaacgggcgcgatgggtgcgaccggagccacgggcgcaacgggcgcgacgggtgcc
acgggcgcgacgggtgccacgggcgcaacgggtgcgacgggtgccaccggcgcaacgggt
gcgacgggtgccaccggcgcaacgggtgccaccggcgccacgggcgcaaccggagccacc
ggcgtgacgggtgccacgggcgcgatgggtgccaccggagccacgggcgcaaccggagcc
accggagccaccggcgcgacgggtgccaccggagccacgggcgcaaccggagccaccgga
gccaccggcgcgacgggtgccacgggcgccaccggcgcgatgggtgccacgggcgcgacg
ggtgccaccggcgcaacgggtgccacgggcgcaaccggagccaccggcgcgacgggtgcg
acgggtgccacgggcgcgatgggtgccaccggcgcgacgggtgcgacgggtgccacgggc
gcgatgggtgccaccggcgcgacgggtgccacgggcgccaccggcgcgatgggtgccacg
ggcgcgacgggtgccaccggcgcaacgggtgccacgggcgcaaccggagccaccggcgcg
acgggtgccacgggtgcgacgggtggaaatccctgcttcgcagaggggacgcggattgcg
actgtgcggggtgacgtgccggtagaggagttggtcgcaggcgatgtggtcgtgctgcac
gacggcggaacggcgccggtggtgtggctcggctatcgcacgatcgacctcgaccgccac
gccagacccgaggcggtgcagccgatcgtgatcgacgccggcgccattgccgacggcatc
ccggtccgcgacctgatcgtctcgccggatcacgctttctacctcgacggcgtgctcatc
ccggcaaaggcgctggttaacggcgcgacgatccggcagctccggcgcagccaggtcacc
tacttccatgtcgagctgccgcagcatgcggtacttctggcggaaggcatggccgcggag
agctacctcgagaccggcaaccgcccggccttcgagaatggcggtgacgcgatcatcctg
catccggacttcgcgcaggccctgcgcgagaccggaagctgcgcgcccttcgccgaggaa
ggcgcgatcgtggaacgggtccgggcacgcatcttggcccgggccgggatcgagaccacg
gacgatgcggatctcaagatccggtatcgggccgatggcgcggcggtgatcacctcgcgc
acggcgatcccgggctacctgaccccggatccgcgtgaccgccgcgtgctcggtgtcaag
atcggcgcgatgatgcttggcgacgagccgatcgcgctcgatcacccggcattgaccgag
ggctggcatgacgtcgaggccgacggccgctggactggcggtgcggcggtggtgccggcc
agcctgatcaacggccgcacgctcacgatcaccgtggtcggcacgctcgcctacccggcc
cacggcgcaaaccgcagcgtcgaagccggctga
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