Acidiphilium cryptum: Acry_1790
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Entry
Acry_1790 CDS
T00527
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
acr
Acidiphilium cryptum
Brite
KEGG Orthology (KO) [BR:
acr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acr03016
]
Acry_1790
Enzymes [BR:
acr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Acry_1790
Transfer RNA biogenesis [BR:
acr03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Acry_1790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
ABQ30993
UniProt:
A5FZG1
LinkDB
All DBs
Position
1972647..1973195
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AA seq
182 aa
AA seq
DB search
MRLFIALDLPWEIRQTLAGFAFNLQGARWVPAQNMHVTLRFIGEASRLQAEEIDHALAAI
RAPGFPLTLAGAGWFEKGGRVTSLWIGVDRNPALLHLQSKIETALRRIGLPPERRRYAPH
VTLARMDLPVGPRFAEFVQSHNLYRSPPIEVGHMTLFSSHLSDDHPAYTAEVEYELGAAP
AP
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgcgccttttcatcgccctcgatctgccttgggagatccggcagaccctggcgggcttc
gccttcaacctgcaaggcgcgcgctgggtgccggcgcagaacatgcacgtgacgctgcgc
ttcatcggcgaggccagccggctccaggccgaggagatcgatcacgcgctcgccgcgatc
cgcgcgccggggtttccgcttaccctggccggggcgggctggttcgagaagggcggccgg
gtgacctcgctgtggatcggggtggaccgcaatccggcgctgctgcacctgcaatcgaag
atcgagaccgcgctgcggcggatcggcctgccgccggaacgccgccgctacgcgccgcac
gtgacgctggcacggatggatctgccggtgggaccgcgcttcgccgaattcgtccagagc
cacaatctctaccgctcgccgccgatcgaggtggggcacatgacgctgttcagctcgcac
ctgagcgacgaccatccggcctatacggcggaggtcgaatacgaactcggcgcggcgccc
gcgccctga
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