Acidiphilium cryptum: Acry_2015
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Entry
Acry_2015 CDS
T00527
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN/SigL
KO
K03092
RNA polymerase sigma-54 factor
Organism
acr
Acidiphilium cryptum
Pathway
acr02020
Two-component system
acr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
acr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Acry_2015
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Acry_2015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acr03021
]
Acry_2015
Transcription machinery [BR:
acr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Acry_2015
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Sigma70_r4
HTH_23
HTH_IclR
HTH_38
HTH_Crp_2
HTH_5
DUF4741
Motif
Other DBs
NCBI-ProteinID:
ABQ31215
UniProt:
A5G033
LinkDB
All DBs
Position
complement(2211195..2212667)
Genome browser
AA seq
490 aa
AA seq
DB search
MAIGPRLDLRHTQSLVMTPQLRQAIQLLQFTNAEVSQFIEDELLKNPLLERVEPEADAAL
PVPRNDAASTEKPTGDIGAEHVVDPDPSGASTPLDVDFSNVYDAGGVGDGTGSGLSPERD
DWIGQIADRPPGLRESLDQQARLAFADPVRRRIAFALIMALDPAGRLADPPEQIAERLAV
APDMLEAVRQTMMRFDPTGMFARDLAECLAVQLDERNRLDPAMRALLANLELLARRDLRS
LMEICGVDAEDLRDMIAEIRRLNPKPGAIFDVTPMTPLIPDVLMRPGPDGDYFLELNPET
MPRVLIRRGFHAQIVARASRETRQFLSERVQSANWLVRALESRAETILRVAGEIVRHQDA
FFRHGIGFLRPLTLREIAAALEIHESTVSRVTSNKVIATPRGIFEMKFFFTTALAGANGE
SHSAEAVRHRISTLIEGEAANRILSDDALARLLQKEGIDIARRTVAKYREALRIPGSAQR
KREKGLLAGG
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggcaataggacctcgtctcgatctgcgacatactcagtcgctggtgatgacgcctcag
ctgcggcaggcgatccagttgctgcagttcacgaatgccgaggtcagccagttcatcgag
gatgaacttctcaagaacccgctgctcgaacgggtggagcccgaagccgacgcggcgctg
cccgtgccgaggaacgacgctgcttccaccgagaagccgacgggcgatattggcgcggaa
catgtggtcgatccggatccctccggcgcgagcacgccgctcgatgtcgatttttcgaat
gtctatgacgctggcggcgtgggtgatggaaccggttccggcctttcgccggagcgggat
gactggatcggccagattgccgaccggccgccggggttgcgggaaagcctcgatcagcag
gcgaggctcgcctttgccgacccggtgcgccgcaggattgcgttcgcactcatcatggcg
ctcgaccctgccggacgcctggccgacccgcccgagcagatcgccgaacgtcttgcagtc
gcccccgacatgctggaggcggtgcgtcagacgatgatgcgtttcgacccgaccggcatg
tttgcccgcgatctggccgaatgtctcgcggttcagctcgacgagcgcaataggctggac
cctgccatgcgcgcgctgcttgccaatctcgaacttcttgccaggcgcgatcttcggtca
ctgatggagatctgcggcgtcgatgccgaagatctgcgcgacatgattgccgaaatccgc
cgcctcaaccccaagccgggggcgatcttcgatgtcacccccatgacgccgttgatccct
gatgtcctgatgcgcccggggccggatggcgactattttctcgaactgaaccccgagacc
atgccccgcgtgctcatccgccgagggttccacgcccaaatcgtcgctcgtgcgtcccgc
gagacgcggcaatttctttccgaacgcgtacaaagcgcgaactggctggtacgtgccctc
gagtcccgcgcggagacgatcctgcgcgtcgccggcgagattgtgcgacaccaggacgcc
ttctttcgccatgggatcgggtttctccggccattgaccctgcgcgaaattgccgccgct
ctcgagatacatgaaagtacggttagccgtgtcacgtcgaacaaggtgatcgccacaccg
cgcggcattttcgagatgaaatttttcttcacgaccgcgcttgcgggcgcgaatggcgaa
agccacagcgccgaggcggtgcgccatcgcatctcgacgctgatcgagggtgaggcggcg
aaccgaatcctctccgacgatgcgcttgccagattgttacaaaaggaaggcatagacata
gcccgccgaactgtggccaaatacagggaagcgttgcgcattcccggctcggcgcaacgc
aagcgcgaaaaagggcttctggcaggaggctga
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