Acidiphilium cryptum: Acry_2101
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Entry
Acry_2101 CDS
T00527
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
acr
Acidiphilium cryptum
Pathway
acr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Acry_2101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acr03019
]
Acry_2101
03400 DNA repair and recombination proteins [BR:
acr03400
]
Acry_2101
Enzymes [BR:
acr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Acry_2101
Messenger RNA biogenesis [BR:
acr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Acry_2101
DNA repair and recombination proteins [BR:
acr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Acry_2101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
ABQ31300
UniProt:
A5G0B8
LinkDB
All DBs
Position
2326565..2328442
Genome browser
AA seq
625 aa
AA seq
DB search
MHHCRRPGESPTPCPVRIDPPRRPTEDIAIEPEAVLRRVFGHDGFRGPQRDIVTHVIAGH
DALVLMPTGGGKSICYQLPAICRRGVGIVVSPLIALMRNQVEALRQLGVRAAAFNSSLEA
AERATVLRALRAGELDLLYVAPERLVTEDFLALLGSVRIALFAIDEAHCVSQWGHDFRPE
YLQLATIGERFPGVPRIALTATADPQTRDDIARRLGLDGARLFISSFDRPNLTYAIAPKI
EPRRQLLAFLRGHEGECGIVYCLSRAAVEETASWLAGQGLRALPYHAGLDAATRNRNQDA
FLGEDGLILVATIAFGMGIDKPDIRFVAHLDLPSSLEAYYQETGRAGRDGAPAETLMLYG
MQDVALRGRLIDQSDAPDEVKRIARAKLGALLGVCETAGCRRRAVLAHFGETYPGDCGRC
DNCRTPVQTWDGTEAARKALSAILRTGQRFGVGHLTDILRGTATDRIRHLGHDRLPTFGV
GADLDRRQWGSVFRQLAVAGLVEIDHEAYGALRITERARPVLRGEEALRLRRDPATGRRG
GQRSTAGPSPAIEAPGFEALREWRREVARSQQVPAYVIFHDATLAALAAARPSSRRDLAA
VPGMGTSKIERYGDAVLAVLARTTA
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
gtgcaccattgccgccggcccggcgaaagccctacaccttgtcccgtgcgaatcgacccg
ccccgacggcctacggaagatatcgccatagaacccgaagcggttctaaggcgggttttc
ggccatgacggtttccgggggccgcagcgcgacatcgtcacccatgtcatcgccgggcat
gacgccctcgtgctgatgcccaccggcggcgggaagtcgatctgctatcaacttcccgca
atctgccggcggggcgtcggaatcgtggtctcgccgctgattgccctgatgcgcaatcag
gtcgaggcgctgcgccagctgggtgtgcgcgccgcggccttcaactcgagcctcgaggcc
gccgaacgcgcgacggttctccgggcacttcgggcaggggagctcgacctgctctacgtg
gcgccggagcggctggtcaccgaggatttcctcgccctgttagggtcggtgcggatcgca
ctcttcgcgatcgacgaagcccactgcgtcagccaatggggccatgatttccggcccgaa
tatctccaactcgcaacgatcggcgagagatttccgggcgtgccccgcatcgcactcacc
gccacggccgatccgcagacgcgcgatgacatcgcgcgccgcctcgggctcgacggggcg
cgcctgttcatctcgagtttcgaccggccgaacctgacctacgcgatcgcgcccaagatc
gagccacggcggcagcttctcgccttcctgcgcggccatgagggcgagtgcggcatcgtc
tactgcctgagccgcgccgccgtcgaggaaacggcgagctggcttgccggccagggcctg
cgggccctgccctatcatgccgggctggatgcggcgacgcggaaccggaaccaggacgcc
ttcctcggcgaggacggcctgatactggttgccaccatcgccttcggcatggggatcgac
aagccggacatccgcttcgtcgcccatctggacctgccatcgagcctggaggcctattat
caggagaccggccgcgccggccgcgacggcgcgccggccgagaccctgatgctctatggt
atgcaggatgtggcattgcgtggacgcctgatcgaccagagcgacgcgccggacgaggtc
aagcgcattgcccgggccaagctcggcgcgctgctcggcgtctgcgagacggccgggtgc
aggcggcgcgcggtgctcgcgcatttcggcgaaacctatcccggagactgcggccgctgc
gacaattgccgcacaccggtgcagacctgggacggtaccgaagccgcgcgcaaggcgctt
tcggcgatactgcgcacggggcagcgcttcggtgtgggccacctgaccgatattctccgc
ggcaccgcgaccgaccggatcaggcatcttggtcacgacaggctgccgacgttcggggtc
ggcgcggatctcgaccgccgccagtggggctcggtcttccgtcagctcgcggtggccggg
ctggtcgagatcgaccacgaggcctatggcgcgctgcgcatcacggagcgggcccggccg
gtgcttcgcggcgaggaggcgctccgcctgcgccgcgaccccgccaccggcaggaggggc
gggcagcgcagcacggcggggccatcaccggcgatcgaagcccccggtttcgaggcgctc
cgggaatggcggcgcgaggtcgcccgctcgcagcaagtgcctgcctatgtcatttttcac
gatgcgacgctggccgccctcgctgccgcgaggccaagcagccggcgcgatctggcggcc
gtgcccggcatgggaaccagcaagatcgaacgctacggcgacgccgtgctcgccgtgctc
gcgaggacaacggcatga
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