Acidiphilium cryptum: Acry_2365
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Entry
Acry_2365 CDS
T00527
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
acr
Acidiphilium cryptum
Brite
KEGG Orthology (KO) [BR:
acr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acr03016
]
Acry_2365
Enzymes [BR:
acr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Acry_2365
Transfer RNA biogenesis [BR:
acr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Acry_2365
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
ABQ31559
UniProt:
A5G127
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All DBs
Position
2603916..2605094
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AA seq
392 aa
AA seq
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MKPSPSFPEPVLIETTEALAALCDRLAAEPFVTVDTEFMREKTYFPELCVVQLGGANDVA
VIDAQAEGLDLAPLGALFANPAVTKVFHACRQDIEIFLLKFGAVPAPLFDTQVAAMVAGF
GDQVGYDTLVSSLAGGRIDKAHRFSDWSARPLSRAQIAYAAADVTWLRPVYEGLRARLTR
EGRLDWVAEEAAVLADPATYRTEPEDAWRRLKLRGGNRRQLALVKAIAAWREREAMRVNV
PRQRIVRDEQIPELAALAPADAEGLTRVRGISSGFAGGKSGRALLEVIASTKAIPDAELP
EAPRAPESARPPAGLVALLKVLLAERAGANHVAARLIASAEDIDRLASEDAPNLPCLQGW
RAELFGNDALRLKGGRIALAARGRRVEVVDLP
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgagcccgagctttcccgaacccgtgctgatcgagaccaccgaggccctcgcc
gccctttgcgaccgtctggcggccgagcccttcgtcaccgtcgataccgagttcatgcgg
gaaaagacctattttcccgagctctgcgtggtccagctcggcggtgcgaacgatgtcgcg
gtgatcgacgcgcaggccgaggggctcgacctcgccccgctcggcgcgctgttcgccaac
ccggcggtcaccaaggtgttccacgcctgccggcaggacatcgagatcttcctgctgaaa
ttcggcgccgtgcccgcaccgctgttcgacacccaggtggcggcgatggtcgccggcttc
ggcgaccaggtcgggtatgacacgctggtctcctcgcttgccggcggccggatcgacaag
gcgcaccgcttctccgactggtcggcccggccgctctcccgcgcgcagatcgcctatgcc
gcggcggacgtgacctggctgcgcccggtctatgaaggcctgcgcgcccggctgacgcgg
gaaggccggctcgactgggtggccgaggaagcggcggtgctggccgatcccgcgacctac
cgcaccgagcccgaggatgcctggcgccggctcaagctgcgcggcggcaatcgccggcag
ctcgcgctggtcaaggcgatcgccgcctggcgcgagcgcgaggcgatgcgggtgaacgtg
ccgcgccagcgcatcgtgcgcgacgagcagatccccgaactcgccgccctcgccccggcg
gatgccgaggggctgacgcgggtgcgcggcatttccagcggcttcgccggcggcaagtcc
ggccgggcgctactggaggtgatcgcctcgacgaaggcgatccccgatgccgaactgccg
gaggcgccgcgcgcccccgaaagcgcccgcccgcccgccggcctcgtggccttgctcaag
gtcctgctcgccgagcgggccggggcgaaccacgtcgccgcccggctgatcgcctccgcc
gaggatatcgaccgcctcgccagcgaggacgcgccgaacctgccctgcctgcaaggctgg
cgcgccgaactgttcggcaacgacgcgctgcgcctcaagggcgggcgcatcgccctcgcc
gcgcgcggccgccgggtcgaggtcgtcgacctgccctga
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